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Items: 40


Commentary: The Influence of Proton Pump Inhibitors on the Fecal Microbiome of Infants with Gastroesophageal Reflux-A Prospective Longitudinal Interventional Study.

Drall KM, Tun HM, Kozyrskyj AL.

Front Cell Infect Microbiol. 2018 Dec 14;8:430. doi: 10.3389/fcimb.2018.00430. eCollection 2018. No abstract available.


Impact of xylanases on gut microbiota of growing pigs fed corn- or wheat-based diets.

Zhang Z, Tun HM, Li R, Gonzalez BJM, Keenes HC, Nyachoti CM, Kiarie E, Khafipour E.

Anim Nutr. 2018 Dec;4(4):339-350. doi: 10.1016/j.aninu.2018.06.007. Epub 2018 Aug 24.


Author Correction: Comparison of DNA-, PMA-, and RNA-based 16S rRNA Illumina sequencing for detection of live bacteria in water.

Li R, Tun HM, Jahan M, Zhang Z, Kumar A, Dilantha Fernando WG, Farenhorst A, Khafipour E.

Sci Rep. 2018 Nov 22;8(1):17427. doi: 10.1038/s41598-018-35437-w.


Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations.

Ho NT, Li F, Lee-Sarwar KA, Tun HM, Brown BP, Pannaraj PS, Bender JM, Azad MB, Thompson AL, Weiss ST, Azcarate-Peril MA, Litonjua AA, Kozyrskyj AL, Jaspan HB, Aldrovandi GM, Kuhn L.

Nat Commun. 2018 Oct 9;9(1):4169. doi: 10.1038/s41467-018-06473-x.


Postnatal exposure to household disinfectants, infant gut microbiota and subsequent risk of overweight in children.

Tun MH, Tun HM, Mahoney JJ, Konya TB, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Brook JR, Lou W, Takaro TK, Scott JA, Kozyrskyj AL; CHILD Study Investigators.

CMAJ. 2018 Sep 17;190(37):E1097-E1107. doi: 10.1503/cmaj.170809. Erratum in: CMAJ. 2018 Nov 12;190(45):E1341.


The association between early life antibiotic use and allergic disease in young children: recent insights and their implications.

Obiakor CV, Tun HM, Bridgman SL, Arrieta MC, Kozyrskyj AL.

Expert Rev Clin Immunol. 2018 Oct;14(10):841-855. doi: 10.1080/1744666X.2018.1521271. Epub 2018 Sep 29. Review.


Association of Exposure to Formula in the Hospital and Subsequent Infant Feeding Practices With Gut Microbiota and Risk of Overweight in the First Year of Life.

Forbes JD, Azad MB, Vehling L, Tun HM, Konya TB, Guttman DS, Field CJ, Lefebvre D, Sears MR, Becker AB, Mandhane PJ, Turvey SE, Moraes TJ, Subbarao P, Scott JA, Kozyrskyj AL; Canadian Healthy Infant Longitudinal Development (CHILD) Study Investigators.

JAMA Pediatr. 2018 Jul 2;172(7):e181161. doi: 10.1001/jamapediatrics.2018.1161. Epub 2018 Jul 2. Erratum in: JAMA Pediatr. 2018 Jul 1;172(7):704.


Dietary supplementation with flaxseed meal and oat hulls modulates intestinal histomorphometric characteristics, digesta- and mucosa-associated microbiota in pigs.

Ndou SP, Tun HM, Kiarie E, Walsh MC, Khafipour E, Nyachoti CM.

Sci Rep. 2018 Apr 12;8(1):5880. doi: 10.1038/s41598-018-24043-5.


Roles of Birth Mode and Infant Gut Microbiota in Intergenerational Transmission of Overweight and Obesity From Mother to Offspring.

Tun HM, Bridgman SL, Chari R, Field CJ, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Scott JA, Kozyrskyj AL; Canadian Healthy Infant Longitudinal Development (CHILD) Study Investigators.

JAMA Pediatr. 2018 Apr 1;172(4):368-377. doi: 10.1001/jamapediatrics.2017.5535.


Interaction of genotype and diet on small intestine microbiota of Japanese quail fed a cholesterol enriched diet.

Liu S, Tun HM, Leung FC, Bennett DC, Zhang H, Cheng KM.

Sci Rep. 2018 Feb 5;8(1):2381. doi: 10.1038/s41598-018-20508-9.


Sex-specific impact of asthma during pregnancy on infant gut microbiota.

Koleva PT, Tun HM, Konya T, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Scott JA, Kozyrskyj AL; CHILD Study Investigators.

Eur Respir J. 2017 Nov 22;50(5). pii: 1700280. doi: 10.1183/13993003.00280-2017. Print 2017 Nov.


Cesarean Section, Formula Feeding, and Infant Antibiotic Exposure: Separate and Combined Impacts on Gut Microbial Changes in Later Infancy.

Yasmin F, Tun HM, Konya TB, Guttman DS, Chari RS, Field CJ, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR; CHILD Study Investigators, Scott JA, Dinu I, Kozyrskyj AL.

Front Pediatr. 2017 Sep 26;5:200. doi: 10.3389/fped.2017.00200. eCollection 2017.


Comparison of DNA-, PMA-, and RNA-based 16S rRNA Illumina sequencing for detection of live bacteria in water.

Li R, Tun HM, Jahan M, Zhang Z, Kumar A, Dilantha Fernando WG, Farenhorst A, Khafipour E.

Sci Rep. 2017 Jul 18;7(1):5752. doi: 10.1038/s41598-017-02516-3. Erratum in: Sci Rep. 2018 Nov 22;8(1):17427.


Selective Induction of Homeostatic Th17 Cells in the Murine Intestine by Cholera Toxin Interacting with the Microbiota.

Zhao Q, Harbour SN, Kolde R, Latorre IJ, Tun HM, Schoeb TR, Turner H, Moon JJ, Khafipour E, Xavier RJ, Weaver CT, Elson CO.

J Immunol. 2017 Jul 1;199(1):312-322. doi: 10.4049/jimmunol.1700171. Epub 2017 May 24.


Exposure to household furry pets influences the gut microbiota of infant at 3-4 months following various birth scenarios.

Tun HM, Konya T, Takaro TK, Brook JR, Chari R, Field CJ, Guttman DS, Becker AB, Mandhane PJ, Turvey SE, Subbarao P, Sears MR, Scott JA, Kozyrskyj AL; CHILD Study Investigators.

Microbiome. 2017 Apr 6;5(1):40. doi: 10.1186/s40168-017-0254-x.


Common Distribution of gad Operon in Lactobacillus brevis and its GadA Contributes to Efficient GABA Synthesis toward Cytosolic Near-Neutral pH.

Wu Q, Tun HM, Law YS, Khafipour E, Shah NP.

Front Microbiol. 2017 Feb 14;8:206. doi: 10.3389/fmicb.2017.00206. eCollection 2017.


Nutritional Models of Experimentally-Induced Subacute Ruminal Acidosis (SARA) Differ in Their Impact on Rumen and Hindgut Bacterial Communities in Dairy Cows.

Plaizier JC, Li S, Tun HM, Khafipour E.

Front Microbiol. 2017 Jan 25;7:2128. doi: 10.3389/fmicb.2016.02128. eCollection 2016.


Linking Peripartal Dynamics of Ruminal Microbiota to Dietary Changes and Production Parameters.

Derakhshani H, Tun HM, Cardoso FC, Plaizier JC, Khafipour E, Loor JJ.

Front Microbiol. 2017 Jan 12;7:2143. doi: 10.3389/fmicb.2016.02143. eCollection 2016.


Bacteria in drinking water sources of a First Nation reserve in Canada.

Farenhorst A, Li R, Jahan M, Tun HM, Mi R, Amarakoon I, Kumar A, Khafipour E.

Sci Total Environ. 2017 Jan 1;575:813-819. doi: 10.1016/j.scitotenv.2016.09.138. Epub 2016 Sep 29.


Detection of Antibiotic Resistance Genes in Source and Drinking Water Samples from a First Nations Community in Canada.

Fernando DM, Tun HM, Poole J, Patidar R, Li R, Mi R, Amarawansha GEA, Fernando WGD, Khafipour E, Farenhorst A, Kumar A.

Appl Environ Microbiol. 2016 Jul 15;82(15):4767-4775. doi: 10.1128/AEM.00798-16. Print 2016 Aug 1.


Monitoring Survivability and Infectivity of Porcine Epidemic Diarrhea Virus (PEDv) in the Infected On-Farm Earthen Manure Storages (EMS).

Tun HM, Cai Z, Khafipour E.

Front Microbiol. 2016 Mar 9;7:265. doi: 10.3389/fmicb.2016.00265. eCollection 2016.


Deletion of the Toll-Like Receptor 5 Gene Per Se Does Not Determine the Gut Microbiome Profile That Induces Metabolic Syndrome: Environment Trumps Genotype.

Zhang W, Hartmann R, Tun HM, Elson CO, Khafipour E, Garvey WT.

PLoS One. 2016 Mar 7;11(3):e0150943. doi: 10.1371/journal.pone.0150943. eCollection 2016.


High Molecular Weight Barley β-Glucan Alters Gut Microbiota Toward Reduced Cardiovascular Disease Risk.

Wang Y, Ames NP, Tun HM, Tosh SM, Jones PJ, Khafipour E.

Front Microbiol. 2016 Feb 10;7:129. doi: 10.3389/fmicb.2016.00129. eCollection 2016.


The effect of diet and host genotype on ceca microbiota of Japanese quail fed a cholesterol enriched diet.

Liu S, Bennett DC, Tun HM, Kim JE, Cheng KM, Zhang H, Leung FC.

Front Microbiol. 2015 Oct 7;6:1092. doi: 10.3389/fmicb.2015.01092. eCollection 2015.


An extended single-index multiplexed 16S rRNA sequencing for microbial community analysis on MiSeq illumina platforms.

Derakhshani H, Tun HM, Khafipour E.

J Basic Microbiol. 2016 Mar;56(3):321-6. doi: 10.1002/jobm.201500420. Epub 2015 Oct 1.


Re-emerging of porcine respiratory and reproductive syndrome virus (lineage 3) and increased pathogenicity after genomic recombination with vaccine variant.

Lu WH, Tun HM, Sun BL, Mo J, Zhou QF, Deng YX, Xie QM, Bi YZ, Leung FC, Ma JY.

Vet Microbiol. 2015 Feb 25;175(2-4):332-40. doi: 10.1016/j.vetmic.2014.11.016. Epub 2014 Dec 3.


Risk factors for H7 and H9 infection in commercial poultry farm workers in provinces within Pakistan.

Ahad A, Thornton RN, Rabbani M, Yaqub T, Younus M, Muhammad K, Mahmood A, Shabbir MZ, Kashem MA, Islam MZ, Mangtani P, Burgess GW, Tun HM, Hoque MA.

Prev Vet Med. 2014 Dec 1;117(3-4):610-4. doi: 10.1016/j.prevetmed.2014.10.007. Epub 2014 Oct 23.


Complete genome sequence and comparative genome analysis of Klebsiella oxytoca HKOPL1 isolated from giant panda feces.

Jiang J, Tun HM, Mauroo NF, Ma AP, Chan SY, Leung FC.

BMC Res Notes. 2014 Nov 23;7:827. doi: 10.1186/1756-0500-7-827.


A survey of gastro-intestinal parasitic infection in domestic and wild birds in Chittagong and Greater Sylhet, Bangladesh.

Hoque MA, Hassan MM, Haque E, Shaikat AH, Khan SA, Alim A, Skerratt LF, Islam A, Tun HM, Dissanayake R, Day TK, Debnath NC, Yamage M.

Prev Vet Med. 2014 Nov 1;117(1):305-12. doi: 10.1016/j.prevetmed.2014.07.012. Epub 2014 Aug 2.


Complete Genome Sequence of Staphylococcus xylosus HKUOPL8, a Potential Opportunistic Pathogen of Mammals.

Ma AP, Jiang J, Tun HM, Mauroo NF, Yuen CS, Leung FC.

Genome Announc. 2014 Jul 24;2(4). pii: e00653-14. doi: 10.1128/genomeA.00653-14.


Microbial community in microbial fuel cell (MFC) medium and effluent enriched with purple photosynthetic bacterium (Rhodopseudomonas sp.).

Park TJ, Ding W, Cheng S, Brar MS, Ma AP, Tun HM, Leung FC.

AMB Express. 2014 Apr 1;4:22. doi: 10.1186/s13568-014-0022-2. eCollection 2014.


Genomic insights into high exopolysaccharide-producing dairy starter bacterium Streptococcus thermophilus ASCC 1275.

Wu Q, Tun HM, Leung FC, Shah NP.

Sci Rep. 2014 May 15;4:4974. doi: 10.1038/srep04974.


Microbial diversity and evidence of novel homoacetogens in the gut of both geriatric and adult giant pandas (Ailuropoda melanoleuca).

Tun HM, Mauroo NF, Yuen CS, Ho JC, Wong MT, Leung FC.

PLoS One. 2014 Jan 24;9(1):e79902. doi: 10.1371/journal.pone.0079902. eCollection 2014.


Characterization of cecal microbiota of the emu (Dromaius novaehollandiae).

Bennett DC, Tun HM, Kim JE, Leung FC, Cheng KM.

Vet Microbiol. 2013 Sep 27;166(1-2):304-10. doi: 10.1016/j.vetmic.2013.05.018. Epub 2013 Jun 14.


Molecular epidemiology of influenza A (H5N1) viruses, Bangladesh, 2007-2011.

Hoque MA, Tun HM, Hassan MM, Khan SA, Islam SA, Islam MN, Giasuddin M, Osmani TM, Islam A, Thornton RN, Burgess GW, Skerratt LF, Selleck P, Brun E, Debnath NC, Leung FC.

Prev Vet Med. 2013 Sep 1;111(3-4):314-8. doi: 10.1016/j.prevetmed.2013.06.003. Epub 2013 Jun 29.


Towards a metagenomic understanding on enhanced biomethane production from waste activated sludge after pH 10 pretreatment.

Wong MT, Zhang D, Li J, Hui RK, Tun HM, Brar MS, Park TJ, Chen Y, Leung FC.

Biotechnol Biofuels. 2013 Mar 19;6(1):38. doi: 10.1186/1754-6834-6-38.


Phylodynamics of H5N1 avian influenza virus in Indonesia.

Lam TT, Hon CC, Lemey P, Pybus OG, Shi M, Tun HM, Li J, Jiang J, Holmes EC, Leung FC.

Mol Ecol. 2012 Jun;21(12):3062-77. doi: 10.1111/j.1365-294X.2012.05577.x. Epub 2012 May 11.


Gene-centric metagenomics analysis of feline intestinal microbiome using 454 junior pyrosequencing.

Tun HM, Brar MS, Khin N, Jun L, Hui RK, Dowd SE, Leung FC.

J Microbiol Methods. 2012 Mar;88(3):369-76. doi: 10.1016/j.mimet.2012.01.001. Epub 2012 Jan 12.


Genetic diversity and multiple introductions of porcine reproductive and respiratory syndrome viruses in Thailand.

Tun HM, Shi M, Wong CL, Ayudhya SN, Amonsin A, Thanawonguwech R, Leung FC.

Virol J. 2011 Apr 12;8:164. doi: 10.1186/1743-422X-8-164.

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