Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 49

1.

Apparent size and morphology of bacterial microcompartments varies with technique.

Kennedy NW, Hershewe JM, Nichols TM, Roth EW, Wilke CD, Mills CE, Jewett MC, Tullman-Ercek D.

PLoS One. 2020 Mar 9;15(3):e0226395. doi: 10.1371/journal.pone.0226395. eCollection 2020.

2.

Multiplexed mass spectrometry of individual ions improves measurement of proteoforms and their complexes.

Kafader JO, Melani RD, Durbin KR, Ikwuagwu B, Early BP, Fellers RT, Beu SC, Zabrouskov V, Makarov AA, Maze JT, Shinholt DL, Yip PF, Tullman-Ercek D, Senko MW, Compton PD, Kelleher NL.

Nat Methods. 2020 Mar 2. doi: 10.1038/s41592-020-0764-5. [Epub ahead of print]

PMID:
32123391
3.

Editorial overview: Energy biotechnology.

Collins CH, Tullman-Ercek D.

Curr Opin Biotechnol. 2019 Jun;57:vii-ix. doi: 10.1016/j.copbio.2019.06.001. No abstract available.

PMID:
31307625
4.

Cargo encapsulation in bacterial microcompartments: Methods and analysis.

Nichols TM, Kennedy NW, Tullman-Ercek D.

Methods Enzymol. 2019;617:155-186. doi: 10.1016/bs.mie.2018.12.009. Epub 2019 Feb 10.

5.

Systematic Engineering of a Protein Nanocage for High-Yield, Site-Specific Modification.

Brauer DD, Hartman EC, Bader DLV, Merz ZN, Tullman-Ercek D, Francis MB.

J Am Chem Soc. 2019 Mar 6;141(9):3875-3884. doi: 10.1021/jacs.8b10734. Epub 2019 Feb 20.

PMID:
30730722
6.

Developing Gram-negative bacteria for the secretion of heterologous proteins.

Burdette LA, Leach SA, Wong HT, Tullman-Ercek D.

Microb Cell Fact. 2018 Dec 20;17(1):196. doi: 10.1186/s12934-018-1041-5. Review.

7.

Experimental Evaluation of Coevolution in a Self-Assembling Particle.

Hartman EC, Lobba MJ, Favor AH, Robinson SA, Francis MB, Tullman-Ercek D.

Biochemistry. 2019 Mar 19;58(11):1527-1538. doi: 10.1021/acs.biochem.8b00948. Epub 2018 Dec 6.

PMID:
30418759
8.

An estimate is worth about a thousand experiments: using order-of-magnitude estimates to identify cellular engineering targets.

Metcalf KJ, Slininger Lee MF, Jakobson CM, Tullman-Ercek D.

Microb Cell Fact. 2018 Aug 30;17(1):135. doi: 10.1186/s12934-018-0979-7. Review.

9.

Type III Secretion Filaments as Templates for Metallic Nanostructure Synthesis.

Glasgow AA, Tullman-Ercek D.

Methods Mol Biol. 2018;1798:155-171. doi: 10.1007/978-1-4939-7893-9_12.

PMID:
29868958
10.

Spatially organizing biochemistry: choosing a strategy to translate synthetic biology to the factory.

Jakobson CM, Tullman-Ercek D, Mangan NM.

Sci Rep. 2018 May 29;8(1):8196. doi: 10.1038/s41598-018-26399-0.

11.

A Pseudomonas putida efflux pump acts on short-chain alcohols.

Basler G, Thompson M, Tullman-Ercek D, Keasling J.

Biotechnol Biofuels. 2018 May 11;11:136. doi: 10.1186/s13068-018-1133-9. eCollection 2018.

12.

Engineering expression and function of membrane proteins.

Kang MK, Tullman-Ercek D.

Methods. 2018 Sep 1;147:66-72. doi: 10.1016/j.ymeth.2018.04.014. Epub 2018 Apr 24. Review.

PMID:
29702227
13.

Quantitative characterization of all single amino acid variants of a viral capsid-based drug delivery vehicle.

Hartman EC, Jakobson CM, Favor AH, Lobba MJ, Álvarez-Benedicto E, Francis MB, Tullman-Ercek D.

Nat Commun. 2018 Apr 11;9(1):1385. doi: 10.1038/s41467-018-03783-y.

14.

Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae.

Davis López SA, Griffith DA, Choi B, Cate JHD, Tullman-Ercek D.

Biotechnol Biofuels. 2018 Apr 2;11:90. doi: 10.1186/s13068-018-1089-9. eCollection 2018.

15.

Evidence for Improved Encapsulated Pathway Behavior in a Bacterial Microcompartment through Shell Protein Engineering.

Slininger Lee MF, Jakobson CM, Tullman-Ercek D.

ACS Synth Biol. 2017 Oct 20;6(10):1880-1891. doi: 10.1021/acssynbio.7b00042. Epub 2017 Jun 21.

PMID:
28585808
16.

A systems-level model reveals that 1,2-Propanediol utilization microcompartments enhance pathway flux through intermediate sequestration.

Jakobson CM, Tullman-Ercek D, Slininger MF, Mangan NM.

PLoS Comput Biol. 2017 May 5;13(5):e1005525. doi: 10.1371/journal.pcbi.1005525. eCollection 2017 May.

17.

A Secretion-Amplification Role for Salmonella enterica Translocon Protein SipD.

Glasgow AA, Wong HT, Tullman-Ercek D.

ACS Synth Biol. 2017 Jun 16;6(6):1006-1015. doi: 10.1021/acssynbio.6b00335. Epub 2017 Mar 16.

PMID:
28301138
18.

De novo design of signal sequences to localize cargo to the 1,2-propanediol utilization microcompartment.

Jakobson CM, Slininger Lee MF, Tullman-Ercek D.

Protein Sci. 2017 May;26(5):1086-1092. doi: 10.1002/pro.3144. Epub 2017 Apr 17.

19.

Proteins adopt functionally active conformations after type III secretion.

Metcalf KJ, Bevington JL, Rosales SL, Burdette LA, Valdivia E, Tullman-Ercek D.

Microb Cell Fact. 2016 Dec 23;15(1):213. doi: 10.1186/s12934-016-0606-4.

20.

Correction to A Selection for Assembly Reveals That a Single Amino Acid Mutant of the Bacteriophage MS2 Coat Protein Forms a Smaller Virus-like Particle.

Asensio MA, Morella NM, Jakobson CM, Hartman EC, Glasgow JE, Sankaran B, Zwart PH, Tullman-Ercek D.

Nano Lett. 2016 Dec 14;16(12):8034. Epub 2016 Nov 10. No abstract available.

PMID:
27960505
21.

Use of Transcriptional Control to Increase Secretion of Heterologous Proteins in T3S Systems.

Metcalf KJ, Tullman-Ercek D.

Methods Mol Biol. 2017;1531:71-79.

PMID:
27837482
22.

A Selection for Assembly Reveals That a Single Amino Acid Mutant of the Bacteriophage MS2 Coat Protein Forms a Smaller Virus-like Particle.

Asensio MA, Morella NM, Jakobson CM, Hartman EC, Glasgow JE, Sankaran B, Zwart PH, Tullman-Ercek D.

Nano Lett. 2016 Sep 14;16(9):5944-50. doi: 10.1021/acs.nanolett.6b02948. Epub 2016 Aug 25. Erratum in: Nano Lett. 2016 Dec 14;16(12):8034.

23.

Tuning the Catalytic Activity of Subcellular Nanoreactors.

Jakobson CM, Chen Y, Slininger MF, Valdivia E, Kim EY, Tullman-Ercek D.

J Mol Biol. 2016 Jul 31;428(15):2989-96. doi: 10.1016/j.jmb.2016.07.006. Epub 2016 Jul 16.

PMID:
27427532
24.

Dumpster Diving in the Gut: Bacterial Microcompartments as Part of a Host-Associated Lifestyle.

Jakobson CM, Tullman-Ercek D.

PLoS Pathog. 2016 May 12;12(5):e1005558. doi: 10.1371/journal.ppat.1005558. eCollection 2016 May. Review. No abstract available.

25.

Type-III secretion filaments as scaffolds for inorganic nanostructures.

Azam A, Tullman-Ercek D.

J R Soc Interface. 2016 Jan;13(114):20150938. doi: 10.1098/rsif.2015.0938.

26.

Transcriptional feedback regulation of efflux protein expression for increased tolerance to and production of n-butanol.

Boyarskiy S, Davis López S, Kong N, Tullman-Ercek D.

Metab Eng. 2016 Jan;33:130-137. doi: 10.1016/j.ymben.2015.11.005. Epub 2015 Nov 30.

PMID:
26656942
27.

Localization of proteins to the 1,2-propanediol utilization microcompartment by non-native signal sequences is mediated by a common hydrophobic motif.

Jakobson CM, Kim EY, Slininger MF, Chien A, Tullman-Ercek D.

J Biol Chem. 2015 Oct 2;290(40):24519-33. doi: 10.1074/jbc.M115.651919. Epub 2015 Aug 17.

28.

Getting pumped: membrane efflux transporters for enhanced biomolecule production.

Boyarskiy S, Tullman-Ercek D.

Curr Opin Chem Biol. 2015 Oct;28:15-9. doi: 10.1016/j.cbpa.2015.05.019. Epub 2015 Jun 5. Review.

PMID:
26056950
29.

Type III secretion as a generalizable strategy for the production of full-length biopolymer-forming proteins.

Azam A, Li C, Metcalf KJ, Tullman-Ercek D.

Biotechnol Bioeng. 2016 Nov;113(11):2313-20. doi: 10.1002/bit.25656. Epub 2015 Jun 30.

PMID:
25993982
30.

Influence of Electrostatics on Small Molecule Flux through a Protein Nanoreactor.

Glasgow JE, Asensio MA, Jakobson CM, Francis MB, Tullman-Ercek D.

ACS Synth Biol. 2015 Sep 18;4(9):1011-9. doi: 10.1021/acssynbio.5b00037. Epub 2015 Apr 28.

PMID:
25893987
31.

Metabolism: 'channeling' Hans Krebs.

Tullman-Ercek D.

Nat Chem Biol. 2015 Mar;11(3):180-1. doi: 10.1038/nchembio.1758. No abstract available.

PMID:
25689335
32.

Engineering transcriptional regulation to control Pdu microcompartment formation.

Kim EY, Jakobson CM, Tullman-Ercek D.

PLoS One. 2014 Nov 26;9(11):e113814. doi: 10.1371/journal.pone.0113814. eCollection 2014.

33.

The effects of time, temperature, and pH on the stability of PDU bacterial microcompartments.

Kim EY, Slininger MF, Tullman-Ercek D.

Protein Sci. 2014 Oct;23(10):1434-41. doi: 10.1002/pro.2527. Epub 2014 Aug 12.

34.

Using transcriptional control to increase titers of secreted heterologous proteins by the type III secretion system.

Metcalf KJ, Finnerty C, Azam A, Valdivia E, Tullman-Ercek D.

Appl Environ Microbiol. 2014 Oct;80(19):5927-34. doi: 10.1128/AEM.01330-14. Epub 2014 Jul 18.

35.

Synthetic biologists spring into action at the 245th American Chemical Society National Meeting.

Glasgow JE, Tullman-Ercek D.

ACS Synth Biol. 2013 Jun 21;2(6):293-5. doi: 10.1021/sb400046t.

PMID:
24884108
36.

Production and applications of engineered viral capsids.

Glasgow J, Tullman-Ercek D.

Appl Microbiol Biotechnol. 2014 Jul;98(13):5847-58. doi: 10.1007/s00253-014-5787-3. Epub 2014 May 10. Review.

PMID:
24816622
37.

A rapid flow cytometry assay for the relative quantification of protein encapsulation into bacterial microcompartments.

Kim EY, Tullman-Ercek D.

Biotechnol J. 2014 Mar;9(3):348-54. doi: 10.1002/biot.201300391. Epub 2014 Jan 14.

PMID:
24323373
38.

An assay for the bacterial sweet spot.

Tullman-Ercek D.

Biotechnol J. 2013 Dec;8(12):1377-8. doi: 10.1002/biot.201300319. Epub 2013 Oct 4. No abstract available.

PMID:
24124082
39.

Enhancing tolerance to short-chain alcohols by engineering the Escherichia coli AcrB efflux pump to secrete the non-native substrate n-butanol.

Fisher MA, Boyarskiy S, Yamada MR, Kong N, Bauer S, Tullman-Ercek D.

ACS Synth Biol. 2014 Jan 17;3(1):30-40. doi: 10.1021/sb400065q. Epub 2013 Sep 13.

PMID:
23991711
40.

Addition of a carbohydrate-binding module enhances cellulase penetration into cellulose substrates.

Reyes-Ortiz V, Heins RA, Cheng G, Kim EY, Vernon BC, Elandt RB, Adams PD, Sale KL, Hadi MZ, Simmons BA, Kent MS, Tullman-Ercek D.

Biotechnol Biofuels. 2013 Jul 3;6(1):93. doi: 10.1186/1754-6834-6-93.

41.

Change, exchange, and rearrange: protein engineering for the biotechnological production of fuels, pharmaceuticals, and other chemicals.

Fisher MA, Tullman-Ercek D.

Curr Opin Biotechnol. 2013 Dec;24(6):1010-6. doi: 10.1016/j.copbio.2013.02.027. Epub 2013 Mar 20. Review.

PMID:
23522655
42.

Engineering nanoscale protein compartments for synthetic organelles.

Kim EY, Tullman-Ercek D.

Curr Opin Biotechnol. 2013 Aug;24(4):627-32. doi: 10.1016/j.copbio.2012.11.012. Epub 2012 Dec 27. Review.

PMID:
23273660
43.

Osmolyte-mediated encapsulation of proteins inside MS2 viral capsids.

Glasgow JE, Capehart SL, Francis MB, Tullman-Ercek D.

ACS Nano. 2012 Oct 23;6(10):8658-64. doi: 10.1021/nn302183h. Epub 2012 Sep 12.

44.

Synthesis of three advanced biofuels from ionic liquid-pretreated switchgrass using engineered Escherichia coli.

Bokinsky G, Peralta-Yahya PP, George A, Holmes BM, Steen EJ, Dietrich J, Lee TS, Tullman-Ercek D, Voigt CA, Simmons BA, Keasling JD.

Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):19949-54. doi: 10.1073/pnas.1106958108. Epub 2011 Nov 28.

45.

Engineering the Salmonella type III secretion system to export spider silk monomers.

Widmaier DM, Tullman-Ercek D, Mirsky EA, Hill R, Govindarajan S, Minshull J, Voigt CA.

Mol Syst Biol. 2009;5:309. doi: 10.1038/msb.2009.62. Epub 2009 Sep 15.

46.

Exploration of twin-arginine translocation for expression and purification of correctly folded proteins in Escherichia coli.

Fisher AC, Kim JY, Perez-Rodriguez R, Tullman-Ercek D, Fish WR, Henderson LA, DeLisa MP.

Microb Biotechnol. 2008 Sep;1(5):403-15. doi: 10.1111/j.1751-7915.2008.00041.x.

47.

Induction and relaxation dynamics of the regulatory network controlling the type III secretion system encoded within Salmonella pathogenicity island 1.

Temme K, Salis H, Tullman-Ercek D, Levskaya A, Hong SH, Voigt CA.

J Mol Biol. 2008 Mar 14;377(1):47-61. doi: 10.1016/j.jmb.2007.12.044. Epub 2007 Dec 28.

48.

Export pathway selectivity of Escherichia coli twin arginine translocation signal peptides.

Tullman-Ercek D, DeLisa MP, Kawarasaki Y, Iranpour P, Ribnicky B, Palmer T, Georgiou G.

J Biol Chem. 2007 Mar 16;282(11):8309-16. Epub 2007 Jan 11.

49.

The bacterial twin-arginine translocation pathway.

Lee PA, Tullman-Ercek D, Georgiou G.

Annu Rev Microbiol. 2006;60:373-95. Review.

Supplemental Content

Loading ...
Support Center