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Items: 1 to 50 of 934

1.

Plasma Levels of Soluble PD-L1 Correlate With Tumor Regression in Patients With Lung and Gastric Cancer Treated With Immune Checkpoint Inhibitors.

Ando K, Hamada K, Watanabe M, Ohkuma R, Shida M, Onoue R, Kubota Y, Matsui H, Ishiguro T, Hirasawa Y, Ariizumi H, Tsurutani J, Yoshimura K, Tsunoda T, Kobayashi S, Wada S.

Anticancer Res. 2019 Sep;39(9):5195-5201. doi: 10.21873/anticanres.13716.

PMID:
31519633
2.

Clinical and immunological characterisation of 14 cases of dipeptidyl peptidase 4 inhibitor-associated bullous pemphigoid: a single centre study.

Hayashi M, Tsunoda T.

Br J Dermatol. 2019 Sep 9. doi: 10.1111/bjd.18516. [Epub ahead of print]

PMID:
31498425
3.

Delayed hemorrhage after cold and hot snare resection of colorectal polyps: a multicenter randomized trial (interim analysis).

Aizawa M, Utano K, Tsunoda T, Ichii O, Kato T, Miyakura Y, Saka M, Nemoto D, Isohata N, Endo S, Ejiri Y, Lefor AK, Togashi K.

Endosc Int Open. 2019 Sep;7(9):E1123-E1129. doi: 10.1055/a-0854-3561. Epub 2019 Aug 29.

4.

Stimulatory and inhibitory effects of metals on 1,4-dioxane degradation by four different 1,4-dioxane-degrading bacteria.

Inoue D, Tsunoda T, Sawada K, Yamamoto N, Sei K, Ike M.

Chemosphere. 2019 Aug 17;238:124606. doi: 10.1016/j.chemosphere.2019.124606. [Epub ahead of print]

PMID:
31446278
5.

A novel compound, ferulic acid-bound resveratrol, induces the tumor suppressor gene p15 and inhibits the three-dimensional proliferation of colorectal cancer cells.

Sawata Y, Matsukawa T, Doi S, Tsunoda T, Arikawa N, Matsunaga N, Ohnuki K, Shirasawa S, Kotake Y.

Mol Cell Biochem. 2019 Aug 22. doi: 10.1007/s11010-019-03606-8. [Epub ahead of print]

PMID:
31440879
6.

Long-term outcomes of pediatric-onset primary sclerosing cholangitis: A single-center experience in Japan.

Umetsu S, Notohara K, Nakazawa T, Tsunoda T, Sogo T, Komatsu H, Tanaka A, Tazuma S, Takikawa H, Inui A, Fujisawa T.

Hepatol Res. 2019 Aug 13. doi: 10.1111/hepr.13421. [Epub ahead of print]

PMID:
31408920
7.

DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture.

Sharma A, Vans E, Shigemizu D, Boroevich KA, Tsunoda T.

Sci Rep. 2019 Aug 6;9(1):11399. doi: 10.1038/s41598-019-47765-6.

8.

Zfat Is Indispensable for the Development of Erythroid Cells in the Fetal Liver.

Doi K, Tsunoda T, Koyanagi M, Tanaka Y, Yamano S, Fujikane A, Nishi K, Ishikura S, Shirasawa S.

Anticancer Res. 2019 Aug;39(8):4495-4502. doi: 10.21873/anticanres.13625.

PMID:
31366551
9.

The Novel Lipid-Lowering Drug D-47 Ameliorates Hepatic Steatosis and Promotes Brown/Beige-Like Change of White Adipose Tissue in db/db Mice.

Mizusaki N, Nomura K, Hosooka T, Shiomi M, Ogawa K, Tsunoda T, Tamori Y, Ogawa W.

Kobe J Med Sci. 2019 Jun 17;65(1):E36-E43.

10.

Comprehensive genetic analysis of cholangiolocellular carcinoma with a coexistent hepatocellular carcinoma-like area and metachronous hepatocellular carcinoma.

Kawai-Kitahata F, Asahina Y, Kaneko S, Tsuchiya J, Sato A, Miyoshi M, Tsunoda T, Inoue-Shinomiya E, Murakawa M, Nitta S, Itsui Y, Nakagawa M, Azuma S, Kakinuma S, Tanabe M, Sugawara E, Takemoto A, Ojima H, Sakamoto M, Muraoka M, Takano S, Maekawa S, Enomoto N, Watanabe M.

Hepatol Res. 2019 Jul 1. doi: 10.1111/hepr.13403. [Epub ahead of print]

PMID:
31261448
11.

Brain wave classification using long short-term memory network based OPTICAL predictor.

Kumar S, Sharma A, Tsunoda T.

Sci Rep. 2019 Jun 24;9(1):9153. doi: 10.1038/s41598-019-45605-1.

12.

Transcriptional and metabolic rewiring of colorectal cancer cells expressing the oncogenic KRASG13D mutation.

Charitou T, Srihari S, Lynn MA, Jarboui MA, Fasterius E, Moldovan M, Shirasawa S, Tsunoda T, Ueffing M, Xie J, Xin J, Wang X, Proud CG, Boldt K, Al-Khalili Szigyarto C, Kolch W, Lynn DJ.

Br J Cancer. 2019 Jul;121(1):37-50. doi: 10.1038/s41416-019-0477-7. Epub 2019 May 28.

13.

Xanthine oxidoreductase activity correlates with vascular endothelial dysfunction in patients with type 1 diabetes.

Washio K, Kusunoki Y, Tsunoda T, Osugi K, Ohigashi M, Murase T, Nakamura T, Matsuo T, Konishi K, Katsuno T, Namba M, Koyama H.

Acta Diabetol. 2019 May 15. doi: 10.1007/s00592-019-01362-1. [Epub ahead of print]

PMID:
31093763
14.

Author Correction: A missense mutation in the HECT domain of NEDD4L identified in a girl with periventricular nodular heterotopia, polymicrogyria, and cleft palate.

Kato K, Miya F, Hori I, Ieda D, Ohashi K, Negishi Y, Hattori A, Okamoto N, Kato M, Tsunoda T, Yamasaki M, Kanemura Y, Kosaki K, Saitoh S.

J Hum Genet. 2019 Jul;64(7):701-702. doi: 10.1038/s10038-019-0610-8.

PMID:
31028281
15.

HseSUMO: Sumoylation site prediction using half-sphere exposures of amino acids residues.

Sharma A, Lysenko A, López Y, Dehzangi A, Sharma R, Reddy H, Sattar A, Tsunoda T.

BMC Genomics. 2019 Apr 18;19(Suppl 9):982. doi: 10.1186/s12864-018-5206-8.

16.

EvolStruct-Phogly: incorporating structural properties and evolutionary information from profile bigrams for the phosphoglycerylation prediction.

Chandra AA, Sharma A, Dehzangi A, Tsunoda T.

BMC Genomics. 2019 Apr 18;19(Suppl 9):984. doi: 10.1186/s12864-018-5383-5.

17.

CD70 expression in tumor-associated fibroblasts predicts worse survival in colorectal cancer patients.

Inoue S, Ito H, Tsunoda T, Murakami H, Ebi M, Ogasawara N, Kasugai K, Kasai K, Ikeda H, Inaguma S.

Virchows Arch. 2019 Apr 13. doi: 10.1007/s00428-019-02565-1. [Epub ahead of print]

PMID:
30980190
18.

Rabeprazole intake does not affect systemic exposure to capecitabine and its metabolites, 5'-deoxy-5-fluorocytidine, 5'-deoxy-5-fluorouridine, and 5-fluorouracil.

Sekido M, Fujita KI, Kubota Y, Ishida H, Takahashi T, Ohkuma R, Tsunoda T, Ishikawa F, Shibanuma M, Sasaki Y.

Cancer Chemother Pharmacol. 2019 Jun;83(6):1127-1135. doi: 10.1007/s00280-019-03837-y. Epub 2019 Apr 9.

PMID:
30972456
19.

Impact of novel NS5A resistance-associated substitutions of hepatitis C virus detected in treatment-experienced patients.

Nitta S, Asahina Y, Kato T, Tsuchiya J, Inoue-Shinomiya E, Sato A, Tsunoda T, Miyoshi M, Kawai-Kitahata F, Murakawa M, Itsui Y, Nakagawa M, Azuma S, Kakinuma S, Hikita H, Takehara T, Watanabe M.

Sci Rep. 2019 Apr 5;9(1):5722. doi: 10.1038/s41598-019-42114-z.

20.

Loss of fibrocystin promotes interleukin-8-dependent proliferation and CTGF production of biliary epithelium.

Tsunoda T, Kakinuma S, Miyoshi M, Kamiya A, Kaneko S, Sato A, Tsuchiya J, Nitta S, Kawai-Kitahata F, Murakawa M, Itsui Y, Nakagawa M, Azuma S, Sogo T, Komatsu H, Mukouchi R, Inui A, Fujisawa T, Nakauchi H, Asahina Y, Watanabe M.

J Hepatol. 2019 Jul;71(1):143-152. doi: 10.1016/j.jhep.2019.02.024. Epub 2019 Mar 19.

PMID:
30898581
21.

Risk prediction models for dementia constructed by supervised principal component analysis using miRNA expression data.

Shigemizu D, Akiyama S, Asanomi Y, Boroevich KA, Sharma A, Tsunoda T, Matsukuma K, Ichikawa M, Sudo H, Takizawa S, Sakurai T, Ozaki K, Ochiya T, Niida S.

Commun Biol. 2019 Feb 25;2:77. doi: 10.1038/s42003-019-0324-7. eCollection 2019.

22.

LIM homeobox 2 promotes interaction between human iPS-derived hepatic progenitors and iPS-derived hepatic stellate-like cells.

Miyoshi M, Kakinuma S, Kamiya A, Tsunoda T, Tsuchiya J, Sato A, Kaneko S, Nitta S, Kawai-Kitahata F, Murakawa M, Itsui Y, Nakagawa M, Azuma S, Nakauchi H, Asahina Y, Watanabe M.

Sci Rep. 2019 Feb 14;9(1):2072. doi: 10.1038/s41598-018-37430-9.

23.

A case of Niemann-Pick disease type C with neonatal liver failure initially diagnosed as neonatal hemochromatosis.

Kumagai T, Terashima H, Uchida H, Fukuda A, Kasahara M, Kosuga M, Okuyama T, Tsunoda T, Inui A, Fujisawa T, Narita A, Eto Y, Kubota M.

Brain Dev. 2019 May;41(5):460-464. doi: 10.1016/j.braindev.2019.01.004. Epub 2019 Feb 6.

24.

Altered upright face recognition and presence of face inversion effect in temporal lobe epilepsy: An event-related potential study.

Mogi T, Tsunoda T, Yoshino A.

Psychiatry Clin Neurosci. 2019 May;73(5):269-276. doi: 10.1111/pcn.12829. Epub 2019 Mar 14.

PMID:
30734399
25.

First detection of a Vssc allele V1016G conferring a high level of insecticide resistance in Aedes albopictus collected from Europe (Italy) and Asia (Vietnam), 2016: a new emerging threat to controlling arboviral diseases.

Kasai S, Caputo B, Tsunoda T, Cuong TC, Maekawa Y, Lam-Phua SG, Pichler V, Itokawa K, Murota K, Komagata O, Yoshida C, Chung HH, Bellini R, Tsuda Y, Teng HJ, Filho JLL, Alves LC, Ng LC, Minakawa N, Yen NT, Phong TV, Sawabe K, Tomita T.

Euro Surveill. 2019 Jan;24(5). doi: 10.2807/1560-7917.ES.2019.24.5.1700847.

26.

Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions.

Sharma R, Sharma A, Patil A, Tsunoda T.

BMC Bioinformatics. 2019 Feb 4;19(Suppl 13):378. doi: 10.1186/s12859-018-2396-7.

27.

GlyStruct: glycation prediction using structural properties of amino acid residues.

Reddy HM, Sharma A, Dehzangi A, Shigemizu D, Chandra AA, Tsunoda T.

BMC Bioinformatics. 2019 Feb 4;19(Suppl 13):547. doi: 10.1186/s12859-018-2547-x.

28.

Metabolic reprogramming of oncogene-addicted cancer cells to OXPHOS as a mechanism of drug resistance.

Hirpara J, Eu JQ, Tan JKM, Wong AL, Clement MV, Kong LR, Ohi N, Tsunoda T, Qu J, Goh BC, Pervaiz S.

Redox Biol. 2018 Dec 17:101076. doi: 10.1016/j.redox.2018.101076. [Epub ahead of print]

29.

Diabetic Retinopathy as a Risk Factor Associated with the Development of Hepatocellular Carcinoma in Nonalcoholic Fatty Liver Disease.

Azuma S, Asahina Y, Kakinuma S, Azuma K, Miyoshi M, Inoue E, Tsunoda T, Sato A, Kaneko S, Nagata H, Kawai-Kitahata F, Murakawa M, Nitta S, Itsui Y, Tomita M, Nakagawa M, Watanabe M.

Dig Dis. 2019;37(3):247-254. doi: 10.1159/000493580. Epub 2019 Jan 9.

PMID:
30625487
30.

Association of serum interferon-λ3 levels with hepatocarcinogenesis in chronic hepatitis C patients treated with direct-acting antiviral agents.

Inoue-Shinomiya E, Murakawa M, Asahina Y, Nakagawa M, Tsuchiya J, Sato A, Tsunoda T, Miyoshi M, Nitta S, Kawai-Kitahata F, Itsui Y, Azuma S, Kakinuma S, Murata K, Mizokami M, Watanabe M.

Hepatol Res. 2019 May;49(5):500-511. doi: 10.1111/hepr.13307. Epub 2019 Feb 7.

PMID:
30623518
31.

MYCN de novo gain-of-function mutation in a patient with a novel megalencephaly syndrome.

Kato K, Miya F, Hamada N, Negishi Y, Narumi-Kishimoto Y, Ozawa H, Ito H, Hori I, Hattori A, Okamoto N, Kato M, Tsunoda T, Kanemura Y, Kosaki K, Takahashi Y, Nagata KI, Saitoh S.

J Med Genet. 2019 Jun;56(6):388-395. doi: 10.1136/jmedgenet-2018-105487. Epub 2018 Dec 20.

PMID:
30573562
32.

PhoglyStruct: Prediction of phosphoglycerylated lysine residues using structural properties of amino acids.

Chandra A, Sharma A, Dehzangi A, Ranganathan S, Jokhan A, Chou KC, Tsunoda T.

Sci Rep. 2018 Dec 18;8(1):17923. doi: 10.1038/s41598-018-36203-8.

33.

SumSec: Accurate Prediction of Sumoylation Sites Using Predicted Secondary Structure.

Dehzangi A, López Y, Taherzadeh G, Sharma A, Tsunoda T.

Molecules. 2018 Dec 10;23(12). pii: E3260. doi: 10.3390/molecules23123260.

34.

An integrative machine learning approach for prediction of toxicity-related drug safety.

Lysenko A, Sharma A, Boroevich KA, Tsunoda T.

Life Sci Alliance. 2018 Nov 28;1(6):e201800098. doi: 10.26508/lsa.201800098. eCollection 2018 Dec.

35.

Whole Genome Sequencing of a Vietnamese Family from a Dioxin Contamination Hotspot Reveals Novel Variants in the Son with Undiagnosed Intellectual Disability.

Nguyen DT, Nguyen HH, Nguyen TD, Nguyen TTH, Nakano K, Maejima K, Sasaki-Oku A, Nguyen VB, Nguyen DB, Le BQ, Wong JH, Tsunoda T, Nakagawa H, Fujimoto A, Nong VH.

Int J Environ Res Public Health. 2018 Nov 23;15(12). pii: E2629. doi: 10.3390/ijerph15122629.

36.

Relationship between occlusal force and condylar morphology in class II and III after bi-maxillary osteotomy.

Ueki K, Yoshizawa K, Moroi A, Tsutsui T, Hotta A, Hiraide R, Takayama A, Tsunoda T, Saito Y, Sato M, Baba N.

J Craniomaxillofac Surg. 2018 Dec;46(12):2103-2107. doi: 10.1016/j.jcms.2018.10.010. Epub 2018 Oct 22.

PMID:
30420148
37.

Gene expression dataset for whole cochlea of Macaca fascicularis.

Mutai H, Miya F, Shibata H, Yasutomi Y, Tsunoda T, Matsunaga T.

Sci Rep. 2018 Oct 22;8(1):15554. doi: 10.1038/s41598-018-33985-9.

38.

Histone deacetylase inhibitors sensitize 5-fluorouracil-resistant MDA-MB-468 breast cancer cells to 5-fluorouracil.

Minegaki T, Suzuki A, Mori M, Tsuji S, Yamamoto S, Watanabe A, Tsuzuki T, Tsunoda T, Yamamoto A, Tsujimoto M, Nishiguchi K.

Oncol Lett. 2018 Nov;16(5):6202-6208. doi: 10.3892/ol.2018.9388. Epub 2018 Sep 4.

39.

OPAL+: Length-Specific MoRF Prediction in Intrinsically Disordered Protein Sequences.

Sharma R, Sharma A, Raicar G, Tsunoda T, Patil A.

Proteomics. 2019 Mar;19(6):e1800058. doi: 10.1002/pmic.201800058. Epub 2018 Nov 2.

PMID:
30324701
40.

Lack of correlation between the costs of anticancer drugs and clinical benefits in Japan.

Satoh E, Sasaki Y, Ohkuma R, Takahashi T, Kubota Y, Ishida H, Hamada K, Kiuchi Y, Tsunoda T.

Cancer Sci. 2018 Dec;109(12):3896-3901. doi: 10.1111/cas.13831. Epub 2018 Nov 27.

41.

Acquisition of resistance to vemurafenib leads to interleukin-10 production through an aberrant activation of Akt in a melanoma cell line.

Inozume T, Tsunoda T, Morisaki T, Harada K, Shirasawa S, Kawamura T.

J Dermatol. 2018 Dec;45(12):1434-1439. doi: 10.1111/1346-8138.14651. Epub 2018 Sep 17.

PMID:
30222203
42.

Exploring predictive biomarkers from clinical genome-wide association studies via multidimensional hierarchical mixture models.

Otani T, Noma H, Sugasawa S, Kuchiba A, Goto A, Yamaji T, Kochi Y, Iwasaki M, Matsui S, Tsunoda T.

Eur J Hum Genet. 2019 Jan;27(1):140-149. doi: 10.1038/s41431-018-0251-y. Epub 2018 Sep 10.

PMID:
30202041
43.

A role of uroleuconaphins, polyketide red pigments in aphid, as a chemopreventor in the host defense system against infection with entomopathogenic fungi.

Horikawa M, Shimazu M, Aibe M, Kaku H, Inai M, Tsunoda T.

J Antibiot (Tokyo). 2018 Nov;71(12):992-999. doi: 10.1038/s41429-018-0093-4. Epub 2018 Aug 20.

PMID:
30127422
44.

Zfat expression in ZsGreen reporter gene knock‑in mice: Implications for a novel function of Zfat in definitive erythropoiesis.

Tsunoda T, Doi K, Ishikura S, Luo H, Nishi K, Matsuzaki H, Koyanagi M, Tanaka Y, Okamura T, Shirasawa S.

Int J Mol Med. 2018 Nov;42(5):2595-2603. doi: 10.3892/ijmm.2018.3806. Epub 2018 Aug 3.

45.

Genome-wide association study suggests four variants influencing outcomes with ranibizumab therapy in exudative age-related macular degeneration.

Akiyama M, Takahashi A, Momozawa Y, Arakawa S, Miya F, Tsunoda T, Ashikawa K, Oshima Y, Yasuda M, Yoshida S, Enaida H, Tan X, Yanagi Y, Yasukawa T, Ogura Y, Nagai Y, Takahashi K, Fujisawa K, Inoue M, Arakawa A, Tanaka K, Yuzawa M, Kadonosono K, Sonoda KH, Ishibashi T, Kubo M.

J Hum Genet. 2018 Oct;63(10):1083-1091. doi: 10.1038/s10038-018-0493-0. Epub 2018 Jul 27.

PMID:
30054556
46.

Mandibular bone healing after advancement or setback surgery using sagittal split ramus osteotomy.

Ueki K, Moroi A, Tsutsui T, Hotta A, Hiraide R, Takayama A, Tsunoda T, Saito Y, Sato M, Baba N, Yoshizawa K.

J Craniomaxillofac Surg. 2018 Sep;46(9):1500-1503. doi: 10.1016/j.jcms.2018.06.010. Epub 2018 Jun 13.

PMID:
30041994
47.

Integrated analysis of human genetic association study and mouse transcriptome suggests LBH and SHF genes as novel susceptible genes for amyloid-β accumulation in Alzheimer's disease.

Yamaguchi-Kabata Y, Morihara T, Ohara T, Ninomiya T, Takahashi A, Akatsu H, Hashizume Y, Hayashi N, Shigemizu D, Boroevich KA, Ikeda M, Kubo M, Takeda M, Tsunoda T.

Hum Genet. 2018 Jul;137(6-7):521-533. doi: 10.1007/s00439-018-1906-z. Epub 2018 Jul 13.

48.

Sample Size for Successful Genome-Wide Association Study of Major Depressive Disorder.

Nishino J, Ochi H, Kochi Y, Tsunoda T, Matsui S.

Front Genet. 2018 Jun 28;9:227. doi: 10.3389/fgene.2018.00227. eCollection 2018.

49.

Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.

Shigemizu D, Miya F, Akiyama S, Okuda S, Boroevich KA, Fujimoto A, Nakagawa H, Ozaki K, Niida S, Kanemura Y, Okamoto N, Saitoh S, Kato M, Yamasaki M, Matsunaga T, Mutai H, Kosaki K, Tsunoda T.

Sci Rep. 2018 Jul 4;8(1):10367. doi: 10.1038/s41598-018-28698-y.

50.

Growth Suppression of Human Colorectal Cancer Cells with Mutated KRAS by 3-Deaza-cytarabine in 3D Floating Culture.

Luo H, Nishi K, Ishikura S, Swain A, Morishige N, Yazaki R, Ohshima T, Shirasawa S, Tsunoda T.

Anticancer Res. 2018 Jul;38(7):4247-4256. doi: 10.21873/anticanres.12721.

PMID:
29970558

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