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Items: 27

1.

Crystal structure of heliorhodopsin.

Shihoya W, Inoue K, Singh M, Konno M, Hososhima S, Yamashita K, Ikeda K, Higuchi A, Izume T, Okazaki S, Hashimoto M, Mizutori R, Tomida S, Yamauchi Y, Abe-Yoshizumi R, Katayama K, Tsunoda SP, Shibata M, Furutani Y, Pushkarev A, Béjà O, Uchihashi T, Kandori H, Nureki O.

Nature. 2019 Oct;574(7776):132-136. doi: 10.1038/s41586-019-1604-6. Epub 2019 Sep 25.

PMID:
31554965
2.

Spectroscopic study of the transmembrane domain of a rhodopsin-phosphodiesterase fusion protein from a unicellular eukaryote.

Watari M, Ikuta T, Yamada D, Shihoya W, Yoshida K, Tsunoda SP, Nureki O, Kandori H.

J Biol Chem. 2019 Mar 8;294(10):3432-3443. doi: 10.1074/jbc.RA118.006277. Epub 2019 Jan 8.

PMID:
30622140
3.

A distinct abundant group of microbial rhodopsins discovered using functional metagenomics.

Pushkarev A, Inoue K, Larom S, Flores-Uribe J, Singh M, Konno M, Tomida S, Ito S, Nakamura R, Tsunoda SP, Philosof A, Sharon I, Yutin N, Koonin EV, Kandori H, Béjà O.

Nature. 2018 Jun;558(7711):595-599. doi: 10.1038/s41586-018-0225-9. Epub 2018 Jun 20.

PMID:
29925949
4.

Production of a Light-Gated Proton Channel by Replacing the Retinal Chromophore with Its Synthetic Vinylene Derivative.

Takayama R, Kaneko A, Okitsu T, Tsunoda SP, Shimono K, Mizuno M, Kojima K, Tsukamoto T, Kandori H, Mizutani Y, Wada A, Sudo Y.

J Phys Chem Lett. 2018 Jun 7;9(11):2857-2862. doi: 10.1021/acs.jpclett.8b00879. Epub 2018 May 16.

PMID:
29750864
5.

Light-Driven Sodium-Pumping Rhodopsin: A New Concept of Active Transport.

Kandori H, Inoue K, Tsunoda SP.

Chem Rev. 2018 Nov 14;118(21):10646-10658. doi: 10.1021/acs.chemrev.7b00548. Epub 2018 Mar 7. Review.

PMID:
29513519
6.

Rhodopsin optogenetic toolbox v2.0 for light-sensitive excitation and inhibition in Caenorhabditis elegans.

Bergs A, Schultheis C, Fischer E, Tsunoda SP, Erbguth K, Husson SJ, Govorunova E, Spudich JL, Nagel G, Gottschalk A, Liewald JF.

PLoS One. 2018 Feb 1;13(2):e0191802. doi: 10.1371/journal.pone.0191802. eCollection 2018.

7.

Functional characterization of sodium-pumping rhodopsins with different pumping properties.

Tsunoda SP, Prigge M, Abe-Yoshizumi R, Inoue K, Kozaki Y, Ishizuka T, Yawo H, Yizhar O, Kandori H.

PLoS One. 2017 Jul 27;12(7):e0179232. doi: 10.1371/journal.pone.0179232. eCollection 2017.

8.

Molecular properties of a DTD channelrhodopsin from Guillardia theta.

Yamauchi Y, Konno M, Ito S, Tsunoda SP, Inoue K, Kandori H.

Biophys Physicobiol. 2017 May 20;14:57-66. doi: 10.2142/biophysico.14.0_57. eCollection 2017.

9.

A unique choanoflagellate enzyme rhodopsin exhibits light-dependent cyclic nucleotide phosphodiesterase activity.

Yoshida K, Tsunoda SP, Brown LS, Kandori H.

J Biol Chem. 2017 May 5;292(18):7531-7541. doi: 10.1074/jbc.M117.775569. Epub 2017 Mar 16.

10.

A natural light-driven inward proton pump.

Inoue K, Ito S, Kato Y, Nomura Y, Shibata M, Uchihashi T, Tsunoda SP, Kandori H.

Nat Commun. 2016 Nov 17;7:13415. doi: 10.1038/ncomms13415.

11.

Optogenetic approaches addressing extracellular modulation of neural excitability.

Ferenczi EA, Vierock J, Atsuta-Tsunoda K, Tsunoda SP, Ramakrishnan C, Gorini C, Thompson K, Lee SY, Berndt A, Perry C, Minniberger S, Vogt A, Mattis J, Prakash R, Delp S, Deisseroth K, Hegemann P.

Sci Rep. 2016 Apr 5;6:23947. doi: 10.1038/srep23947.

12.

Conversion of a light-driven proton pump into a light-gated ion channel.

Vogt A, Guo Y, Tsunoda SP, Kateriya S, Elstner M, Hegemann P.

Sci Rep. 2015 Nov 24;5:16450. doi: 10.1038/srep16450.

13.

Conversion of channelrhodopsin into a light-gated chloride channel.

Wietek J, Wiegert JS, Adeishvili N, Schneider F, Watanabe H, Tsunoda SP, Vogt A, Elstner M, Oertner TG, Hegemann P.

Science. 2014 Apr 25;344(6182):409-12. doi: 10.1126/science.1249375. Epub 2014 Mar 27.

14.

Spontaneous formation of IpaB ion channels in host cell membranes reveals how Shigella induces pyroptosis in macrophages.

Senerovic L, Tsunoda SP, Goosmann C, Brinkmann V, Zychlinsky A, Meissner F, Kolbe M.

Cell Death Dis. 2012 Sep 6;3:e384. doi: 10.1038/cddis.2012.124.

15.

Color-tuned channelrhodopsins for multiwavelength optogenetics.

Prigge M, Schneider F, Tsunoda SP, Shilyansky C, Wietek J, Deisseroth K, Hegemann P.

J Biol Chem. 2012 Sep 14;287(38):31804-12. doi: 10.1074/jbc.M112.391185. Epub 2012 Jul 27.

16.

Glu 87 of channelrhodopsin-1 causes pH-dependent color tuning and fast photocurrent inactivation.

Tsunoda SP, Hegemann P.

Photochem Photobiol. 2009 Mar-Apr;85(2):564-9. doi: 10.1111/j.1751-1097.2008.00519.x. Epub 2009 Jan 19.

PMID:
19192197
17.

Channelrhodopsin-1 initiates phototaxis and photophobic responses in chlamydomonas by immediate light-induced depolarization.

Berthold P, Tsunoda SP, Ernst OP, Mages W, Gradmann D, Hegemann P.

Plant Cell. 2008 Jun;20(6):1665-77. doi: 10.1105/tpc.108.057919. Epub 2008 Jun 13.

18.

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri.

Zhang F, Prigge M, Beyrière F, Tsunoda SP, Mattis J, Yizhar O, Hegemann P, Deisseroth K.

Nat Neurosci. 2008 Jun;11(6):631-3. doi: 10.1038/nn.2120. Epub 2008 Apr 23.

19.

Photoactivation of channelrhodopsin.

Ernst OP, Sánchez Murcia PA, Daldrop P, Tsunoda SP, Kateriya S, Hegemann P.

J Biol Chem. 2008 Jan 18;283(3):1637-43. Epub 2007 Nov 9.

20.

H+ -pumping rhodopsin from the marine alga Acetabularia.

Tsunoda SP, Ewers D, Gazzarrini S, Moroni A, Gradmann D, Hegemann P.

Biophys J. 2006 Aug 15;91(4):1471-9. Epub 2006 May 26. Erratum in: Biophys J. 2007 Jan 15;92(2):697.

21.

Probing conformations of the beta subunit of F0F1-ATP synthase in catalysis.

Masaike T, Suzuki T, Tsunoda SP, Konno H, Yoshida M.

Biochem Biophys Res Commun. 2006 Apr 14;342(3):800-7. Epub 2006 Feb 17.

PMID:
16517239
22.

Proton exclusion by an aquaglyceroprotein: a voltage clamp study.

Saparov SM, Tsunoda SP, Pohl P.

Biol Cell. 2005 Jul;97(7):545-50.

PMID:
15850456
23.

Aquaporin-1, nothing but a water channel.

Tsunoda SP, Wiesner B, Lorenz D, Rosenthal W, Pohl P.

J Biol Chem. 2004 Mar 19;279(12):11364-7. Epub 2003 Dec 30.

24.

Large conformational changes of the epsilon subunit in the bacterial F1F0 ATP synthase provide a ratchet action to regulate this rotary motor enzyme.

Tsunoda SP, Rodgers AJ, Aggeler R, Wilce MC, Yoshida M, Capaldi RA.

Proc Natl Acad Sci U S A. 2001 Jun 5;98(12):6560-4. Epub 2001 May 29.

25.

Rotation of the c subunit oligomer in fully functional F1Fo ATP synthase.

Tsunoda SP, Aggeler R, Yoshida M, Capaldi RA.

Proc Natl Acad Sci U S A. 2001 Jan 30;98(3):898-902. Epub 2001 Jan 23.

26.

Observations of rotation within the F(o)F(1)-ATP synthase: deciding between rotation of the F(o)c subunit ring and artifact.

Tsunoda SP, Aggeler R, Noji H, Kinosita K Jr, Yoshida M, Capaldi RA.

FEBS Lett. 2000 Mar 31;470(3):244-8.

27.

Cross-linking of two beta subunits in the closed conformation in F1-ATPase.

Tsunoda SP, Muneyuki E, Amano T, Yoshida M, Noji H.

J Biol Chem. 1999 Feb 26;274(9):5701-6.

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