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Items: 40

1.

Sphingomonas wittichii Strain RW1 Genome-Wide Gene Expression Shifts in Response to Dioxins and Clay.

Chai B, Tsoi TV, Iwai S, Liu C, Fish JA, Gu C, Johnson TA, Zylstra G, Teppen BJ, Li H, Hashsham SA, Boyd SA, Cole JR, Tiedje JM.

PLoS One. 2016 Jun 16;11(6):e0157008. doi: 10.1371/journal.pone.0157008. eCollection 2016.

2.

DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment.

Sul WJ, Park J, Quensen JF 3rd, Rodrigues JL, Seliger L, Tsoi TV, Zylstra GJ, Tiedje JM.

Appl Environ Microbiol. 2009 Sep;75(17):5501-6. doi: 10.1128/AEM.00121-09. Epub 2009 Jul 31.

3.

Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.

Chain PS, Denef VJ, Konstantinidis KT, Vergez LM, Agulló L, Reyes VL, Hauser L, Córdova M, Gómez L, González M, Land M, Lao V, Larimer F, LiPuma JJ, Mahenthiralingam E, Malfatti SA, Marx CJ, Parnell JJ, Ramette A, Richardson P, Seeger M, Smith D, Spilker T, Sul WJ, Tsoi TV, Ulrich LE, Zhulin IB, Tiedje JM.

Proc Natl Acad Sci U S A. 2006 Oct 17;103(42):15280-7. Epub 2006 Oct 9.

4.

Degradation of aroclor 1242 dechlorination products in sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. strain RHA1(fcb).

Rodrigues JL, Kachel CA, Aiello MR, Quensen JF, Maltseva OV, Tsoi TV, Tiedje JM.

Appl Environ Microbiol. 2006 Apr;72(4):2476-82.

5.

Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400.

Denef VJ, Klappenbach JA, Patrauchan MA, Florizone C, Rodrigues JL, Tsoi TV, Verstraete W, Eltis LD, Tiedje JM.

Appl Environ Microbiol. 2006 Jan;72(1):585-95.

6.

Growth substrate- and phase-specific expression of biphenyl, benzoate, and C1 metabolic pathways in Burkholderia xenovorans LB400.

Denef VJ, Patrauchan MA, Florizone C, Park J, Tsoi TV, Verstraete W, Tiedje JM, Eltis LD.

J Bacteriol. 2005 Dec;187(23):7996-8005.

7.

Biphenyl and benzoate metabolism in a genomic context: outlining genome-wide metabolic networks in Burkholderia xenovorans LB400.

Denef VJ, Park J, Tsoi TV, Rouillard JM, Zhang H, Wibbenmeyer JA, Verstraete W, Gulari E, Hashsham SA, Tiedje JM.

Appl Environ Microbiol. 2004 Aug;70(8):4961-70.

8.

Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities.

Denef VJ, Park J, Rodrigues JL, Tsoi TV, Hashsham SA, Tiedje JM.

Environ Microbiol. 2003 Oct;5(10):933-43.

PMID:
14510847
9.

Use of both 16S rRNA and engineered functional genes with real-time PCR to quantify an engineered, PCB-degrading Rhodococcus in soil.

Rodrigues JL, Aiello MR, Urbance JW, Tsoi TV, Tiedje JM.

J Microbiol Methods. 2002 Oct;51(2):181-9.

PMID:
12133610
10.

Development of a Rhodococcus recombinant strain for degradation of products from anaerobic dechlorination of PCBs.

Rodrigues JL, Maltseva OV, Tsoi TV, Helton RR, Quensen JF 3rd, Fukuda M, Tiedje JM.

Environ Sci Technol. 2001 Feb 15;35(4):663-8.

PMID:
11349275
11.

Degradation of anaerobic reductive dechlorination products of Aroclor 1242 by four aerobic bacteria.

Maltseva OV, Tsoi TV, Quensen JF 3rd, Fukuda M, Tiedje JM.

Biodegradation. 1999;10(5):363-71.

PMID:
10870552
12.

Construction and characterization of two recombinant bacteria that grow on ortho- and para-substituted chlorobiphenyls.

Hrywna Y, Tsoi TV, Maltseva OV, Quensen JF 3rd, Tiedje JM.

Appl Environ Microbiol. 1999 May;65(5):2163-9.

13.

Cloning, expression, and nucleotide sequence of the Pseudomonas aeruginosa 142 ohb genes coding for oxygenolytic ortho dehalogenation of halobenzoates.

Tsoi TV, Plotnikova EG, Cole JR, Guerin WF, Bagdasarian M, Tiedje JM.

Appl Environ Microbiol. 1999 May;65(5):2151-62.

14.

[Cloning and expression of the Arthrobacter globiformis fcb genes in Bacillus subtilis].

Mikhaĭliuk NV, Bukhtiiarova MG, Tsoĭ TV, Boronin AM.

Mol Gen Mikrobiol Virusol. 1992 Nov-Dec;(11-12):23-5. Russian.

PMID:
1301499
15.

Genetic control of degradation of chlorinated benzoic acids in Arthrobacter globiformis, Corynebacterium sepedonicum and Pseudomonas cepacia strains.

Zaitsev GM, Tsoi TV, Grishenkov VG, Plotnikova EG, Boronin AM.

FEMS Microbiol Lett. 1991 Jun 15;65(2):171-6.

PMID:
1884993
16.

Cloning and expression of the Arthrobacter globiformis KZT1 fcbA gene encoding dehalogenase (4-chlorobenzoate-4-hydroxylase) in Escherichia coli.

Tsoi TV, Zaitsev GM, Plotnikova EG, Kosheleva IA, Boronin AM.

FEMS Microbiol Lett. 1991 Jun 15;65(2):165-9.

PMID:
1884992
17.

[Cloning of the Arthrobacter globiformis fcbA gene for dehalogenase and construction of a hybrid pathway of 4-chlorobenzoic acid degradation in Pseudomonas putida].

Plotnkova EG, Tsoĭ TV, Grishchenkov VG, Zaĭtsev GM, Nagaeva MV, Boronin AM.

Genetika. 1991 Apr;27(4):589-97. Russian.

PMID:
1879677
18.

[Isolation and certain properties of the thermostable endoglucanase from E. coli C600 (pKNE-102) coded by a Clostridium thermocellum gene].

Golovchenko NP, Kataeva IA, Bukhtiiarova MG, Aminov RI, Tsoĭ TV, Akimenko VK, Boronin AM.

Biokhimiia. 1991 Jan;56(1):49-54. Russian.

PMID:
1863671
19.

[Cloning and expression of Clostridium thermocellum F7 endoglucanase gene in gram-negative bacteria].

Aminov RI, Gribanova LK, Kataeva IA, Golovchenko NP, Tsoĭ TV, Akimenko VK.

Genetika. 1990 Aug;26(8):1391-8. Russian.

PMID:
2258032
20.

[Cloning and expression of Clostridium thermocellum F7 cellulase genes in Escherichia coli and Bacillus subtilis cells].

Tsoĭ TV, Bukhtiiarova MG, Aminov RI, Golovchenko NP, Kataeva IA, Kosheleva IA, Akimenko VK, Boronin AM.

Genetika. 1990 Aug;26(8):1349-60. Russian.

PMID:
2124195
21.

[Genetic systems of biodegradation: organization and regulation of expression].

Boronin AM, Tsoĭ TV.

Genetika. 1989 Apr;25(4):581-94. Review. Russian.

PMID:
2668123
22.

[Cloning of Pseudomonas putida genes responsible for the primary stages of oxidation of naphthalene in Escherichia coli cells].

Boronin AM, Tsoĭ TV, Kosheleva IA, Arinbasarov MU, Adanin VM.

Genetika. 1989 Feb;25(2):226-37. Russian.

PMID:
2661326
23.

[Cloning and expression of Pseudomonas putida gene controlling the catechol-2,3-oxygenase activity in Escherichia coli cells].

Tsoĭ TV, Kosheleva IA, Zamaraev VS, Trelina OV, Selifonov SA.

Genetika. 1988 Sep;24(9):1550-61. Russian.

PMID:
3058550
24.
25.

[Silent genes of the catechol oxidation meta-pathway in naphthalene biodegradation plasmids].

Boronin AM, Kulakova AN, Tsoĭ TV, Kosheleva IA, Kochetkov VV.

Dokl Akad Nauk SSSR. 1988 Mar-Apr;299(1):237-40. Russian. No abstract available.

PMID:
3378500
26.

[Mapping of the regions participating in the replication, maintenance and mobilization of the R-plasmid pBS222 with a wide circle of bacterial hosts].

Polevoda BV, Gribanova LK, Ugarov VI, Lebedev AN, Tsoĭ TV.

Genetika. 1988 Mar;24(3):405-13. Russian.

PMID:
2837421
27.

[Mutations of plasmid pBS286 blocking the initial stages of naphthalene oxidation induced by Tn5].

Kosheleva IA, Tsoĭ TV, Ivashina TV, Selifonov SA, Starovoĭtov II.

Genetika. 1988 Mar;24(3):396-404. Russian.

PMID:
2837420
28.

[Clostridium thermocellum--a new object of genetic studies].

Tsoĭ TV, Chuvil'skaia NA, Atakishieva IaIu, Dzhavakhishvili TsTs, Akimenko VK.

Mol Gen Mikrobiol Virusol. 1987 Nov;(11):18-23. Russian.

PMID:
3444439
29.

[Molecular genetic organization and origin of plasmid pBS52 with a broad range of bacterial hosts].

Polevoda BV, Tsoĭ TV, Boronin AM.

Genetika. 1987 Oct;23(10):1823-31. Russian.

PMID:
3319772
30.

[Structural-functional organization of R-plasmid pBS222 with a broad range of bacterial hosts].

Polevoda BV, Tsoĭ TV, Boronin AM.

Mol Gen Mikrobiol Virusol. 1986 Dec;(12):3-10. Russian.

PMID:
3027554
31.

[Genetic characteristics and physical organization of the R-plasmid pBS52 with a broad range of bacterial hosts].

Polevoda BV, Tsoĭ TV, Boronin AM.

Mol Gen Mikrobiol Virusol. 1986 Nov;(11):18-23. Russian.

PMID:
3029577
32.

[Nah-genes of Pseudomonas putida: molecular genetic analysis of the plasmid pBS286].

Tsoĭ TV, Kosheleva IA, Boronin AM.

Genetika. 1986 Nov;22(11):2702-12. Russian.

PMID:
3026897
33.

[Comparative analysis of the organization of the NPL-1 plasmid controlling naphthalene oxidation in Pseudomonas putida and its derivatives].

Kosheleva IA, Tsoĭ TV, Kulakova AN, Boronin AM.

Genetika. 1986 Oct;22(10):2389-97. Russian.

PMID:
3025060
34.

[Molecular genetic studies of the DNA promotor regions in Bacillus thuringiensis subsp. galleriae 69-6. I. Structural and functional analysis].

Tsoĭ TV, Sorokin AV, Krupenko MA, Sezonov GV, Rebentish BA.

Genetika. 1984 Sep;20(9):1419-27. Russian.

PMID:
6389259
35.
36.
37.

[Cloning and the expression of the DNA promotor fragments of Bacillus thuringiensis in Escherichia coli cells].

Tsoĭ TV, Sakanian VA, Lebedev AN, Alikhanian SI.

Genetika. 1981;17(12):2100-4. Russian.

PMID:
7033045
39.

Regulation of mitochondrial biogenesis: further evidence for proteinase involvement.

Galkin AV, Tsoi TV, Luzikov VN.

FEBS Lett. 1979 Sep 15;105(2):373-5. No abstract available.

40.

Abnormalities in mitochondrial respiratory chain assembly and their proteolytic elimination.

Galkin AV, Tsoi TV, Luzikov VN.

FEBS Lett. 1979 Jul 1;103(1):111-3. No abstract available.

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