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Items: 1 to 50 of 102

1.

Properties of Malic Enzyme from the Aerobic Methanotroph Methylosinus trichosporium.

Rozova ON, Khmelenina VN, Mustakhimov II, But SY, Trotsenko YA.

Biochemistry (Mosc). 2019 Apr;84(4):390-397. doi: 10.1134/S0006297919040060.

PMID:
31228930
2.

Metabolic Features of Aerobic Methanotrophs: News and Views.

Khmelenina VN, But SY, Rozova ON, Trotsenko YA.

Curr Issues Mol Biol. 2019 Jun 5;33:85-100. doi: 10.21775/cimb.033.085. [Epub ahead of print]

PMID:
31166186
3.

Methylopila carotae sp. nov., a facultative methylotroph, isolated from a root of Daucus carota L.

Kaparullina EN, Chemodurova AA, Agafonova NV, Karataeva TA, Detkova EN, Trotsenko YA, Doronina NV.

Antonie Van Leeuwenhoek. 2019 Sep;112(9):1307-1316. doi: 10.1007/s10482-019-01263-x. Epub 2019 Apr 10.

PMID:
30972598
4.

ATP- and Polyphosphate-Dependent Glucokinases from Aerobic Methanotrophs.

Reshetnikov AS, Solntseva NP, Rozova ON, Mustakhimov II, Trotsenko YA, Khmelenina VN.

Microorganisms. 2019 Feb 14;7(2). pii: E52. doi: 10.3390/microorganisms7020052.

5.

Individual stages of bacterial dichloromethane degradation mapped by carbon and chlorine stable isotope analysis.

Torgonskaya ML, Zyakun AM, Trotsenko YA, Laurinavichius KS, Kümmel S, Vuilleumier S, Richnow HH.

J Environ Sci (China). 2019 Apr;78:147-160. doi: 10.1016/j.jes.2018.09.008. Epub 2018 Sep 26.

PMID:
30665634
6.

Serine-glyoxylate aminotranferases from methanotrophs using different C1-assimilation pathways.

But SY, Egorova SV, Khmelenina VN, Trotsenko YA.

Antonie Van Leeuwenhoek. 2019 May;112(5):741-751. doi: 10.1007/s10482-018-1208-4. Epub 2018 Dec 3.

PMID:
30511326
7.

Distribution of 1-aminocyclopropane-1-carboxylate deaminase and D-cysteine desulfhydrase genes among type species of the genus Methylobacterium.

Ekimova GA, Fedorov DN, Tani A, Doronina NV, Trotsenko YA.

Antonie Van Leeuwenhoek. 2018 Oct;111(10):1723-1734. doi: 10.1007/s10482-018-1061-5. Epub 2018 Mar 8.

PMID:
29520528
8.

The genes and enzymes of sucrose metabolism in moderately thermophilic methanotroph Methylocaldum szegediense O12.

But SY, Solntseva NP, Egorova SV, Mustakhimov II, Khmelenina VN, Reshetnikov A, Trotsenko YA.

Extremophiles. 2018 May;22(3):433-445. doi: 10.1007/s00792-018-1006-y. Epub 2018 Feb 13.

PMID:
29442248
9.

Biochemical Properties and Phylogeny of Hydroxypyruvate Reductases from Methanotrophic Bacteria with Different C1-Assimilation Pathways.

But SY, Egorova SV, Khmelenina VN, Trotsenko YA.

Biochemistry (Mosc). 2017 Nov;82(11):1295-1303. doi: 10.1134/S0006297917110074.

10.

Ancylobacter sonchi sp. nov., a novel methylotrophic bacterium frоm roots of Sonchus arvensis L.

Agafonova NV, Kaparullina EN, Trotsenko YA, Doronina NV.

Int J Syst Evol Microbiol. 2017 Nov;67(11):4552-4558. doi: 10.1099/ijsem.0.002330. Epub 2017 Oct 6.

PMID:
28984222
11.

Draft Genome Sequences of Two Gammaproteobacterial Methanotrophs Isolated from Rice Ecosystems.

Frindte K, Kalyuzhnaya MG, Bringel F, Dunfield PF, Jetten MSM, Khmelenina VN, Klotz MG, Murrell JC, Op den Camp HJM, Sakai Y, Semrau JD, Shapiro N, DiSpirito AA, Stein LY, Svenning MM, Trotsenko YA, Vuilleumier S, Woyke T, Knief C.

Genome Announc. 2017 Aug 17;5(33). pii: e00526-17. doi: 10.1128/genomeA.00526-17.

12.

Characterization of Two Recombinant 3-Hexulose-6-Phosphate Synthases from the Halotolerant Obligate Methanotroph Methylomicrobium alcaliphilum 20Z.

Rozova ON, But SY, Khmelenina VN, Reshetnikov AS, Mustakhimov II, Trotsenko YA.

Biochemistry (Mosc). 2017 Feb;82(2):176-185. doi: 10.1134/S0006297917020092.

13.

[Functionality of Metdi5511gene in Methylobacterium dichloromethanicum DM4].

Firsova YE, Torgonskaya ML, Trotsenko YA.

Prikl Biokhim Mikrobiol. 2017 Mar-Apr;53(2):196-203. Russian.

PMID:
29508981
14.

Biodiversity of aerobic methylobacteria associated with the phyllosphere of the southern Moscow Oblast.

Mikrobiologiia EN, Doronina NV, Mustakhimov II, Agafonova NV, Trotsenko YA.

Mikrobiologiia. 2017 Jan-Feb;86(1):107-13. Chinese.

PMID:
30207149
15.

A novel Delftia plant symbiont capable of autotrophic methylotrophy.

Agafonova NV, Doronina NV, Kaparullina EN, Fedorov DN, Gafarov AB, Sazonova OI, Sokolov SL, Trotsenko YA.

Mikrobiologiia. 2017 Jan-Feb;86(1):88-98. Chinese.

PMID:
30207147
16.

The properties and potential metabolic role of glucokinase in halotolerant obligate methanotroph Methylomicrobium alcaliphilum 20Z.

Mustakhimov II, Rozova ON, Solntseva NP, Khmelenina VN, Reshetnikov AS, Trotsenko YA.

Antonie Van Leeuwenhoek. 2017 Mar;110(3):375-386. doi: 10.1007/s10482-016-0809-z. Epub 2016 Dec 3.

PMID:
27915410
17.

Methylobacillus methanolivorans sp. nov., a novel non-pigmented obligately methylotrophic bacterium.

Kaparullina EN, Trotsenko YA, Doronina NV.

Int J Syst Evol Microbiol. 2017 Feb;67(2):425-431. doi: 10.1099/ijsem.0.001646. Epub 2017 Feb 24.

PMID:
27902271
18.

Draft Genome Sequence of Methylophaga muralis Bur 1, a Haloalkaliphilic (Non-Methane-Utilizing) Methylotroph Isolated from a Soda Lake.

Trotsenko YA, Shmareva MN, Doronina NV, Tarlachkov SV, Mustakhimov II, Vasilenko OV.

Genome Announc. 2016 Nov 3;4(6). pii: e01227-16. doi: 10.1128/genomeA.01227-16.

19.

Draft Genome Sequence of Methyloligella halotolerans С2T, a New Halotolerant Methylotroph, Accumulating Poly-3-Hydroxybutyrate and Ectoine.

Vasilenko OV, Doronina NV, Shmareva MN, Tarlachkov SV, Trotsenko YA.

Genome Announc. 2016 Oct 27;4(5). pii: e01189-16. doi: 10.1128/genomeA.01189-16.

20.

Emended Description of Methylovorus glucosotrophus Govorukhina and Trotsenko 1991.

Doronina NV, Kaparulina EN, Trotsenko YA.

Mikrobiologiia. 2016 Sep;85(5):506-511.

PMID:
29364598
21.

[Enhanced Resistance of Pea Plants to Oxidative: Stress Caused by Paraquat during Colonization by Aerobic Methylobacteria].

Agafonova NV, Doronina NY, Trotsenko YA.

Prikl Biokhim Mikrobiol. 2016 Mar-Apr;52(2):210-6. Russian.

PMID:
27266250
22.

[Homo- and heterologous reporter proteins for evaluation of promoter activity in Methylomicrobium alcaliphilum 20Z].

Mustakhimov II, But SY, Reshetnikov AS, Khmelenina VN, Trotsenko YA.

Prikl Biokhim Mikrobiol. 2016 May-Jun;52(3):279-86. Russian.

PMID:
29509383
23.

[Functionality of the xoxF Gene in Methylobacterium dichloromethanicum DM4].

Firsova YE, Torgonskaya ML, Trotsenko YA.

Mikrobiologiia. 2015 Nov-Dec;84(6):697-704. Russian.

PMID:
26964359
24.

Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems.

Flynn JD, Hirayama H, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Khmelenina VN, Trotsenko YA, Murrell JC, Semrau JD, Svenning MM, Stein LY, Kyrpides N, Shapiro N, Woyke T, Bringel F, Vuilleumier S, DiSpirito AA, Kalyuzhnaya MG.

Genome Announc. 2016 Jan 21;4(1). pii: e01629-15. doi: 10.1128/genomeA.01629-15.

25.

Acetate kinase-an enzyme of the postulated phosphoketolase pathway in Methylomicrobium alcaliphilum 20Z.

Rozova ON, Khmelenina VN, Gavletdinova JZ, Mustakhimov II, Trotsenko YA.

Antonie Van Leeuwenhoek. 2015 Oct;108(4):965-74. doi: 10.1007/s10482-015-0549-5. Epub 2015 Aug 15.

PMID:
26275877
26.

Draft Genome Sequence of the Moderately Halophilic Methanotroph Methylohalobius crimeensis Strain 10Ki.

Sharp CE, Smirnova AV, Kalyuzhnaya MG, Bringel F, Hirayama H, Jetten MS, Khmelenina VN, Klotz MG, Knief C, Kyrpides N, Op den Camp HJ, Reshetnikov AS, Sakai Y, Shapiro N, Trotsenko YA, Vuilleumier S, Woyke T, Dunfield PF.

Genome Announc. 2015 Jun 11;3(3). pii: e00644-15. doi: 10.1128/genomeA.00644-15.

27.

Draft genomes of gammaproteobacterial methanotrophs isolated from terrestrial ecosystems.

Hamilton R, Kits KD, Ramonovskaya VA, Rozova ON, Yurimoto H, Iguchi H, Khmelenina VN, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Bringel F, Vuilleumier S, Svenning MM, Shapiro N, Woyke T, Trotsenko YA, Stein LY, Kalyuzhnaya MG.

Genome Announc. 2015 Jun 4;3(3). pii: e00515-15. doi: 10.1128/genomeA.00515-15.

28.

[Biosynthesis of secondary metabolites in methanotrophs: biochemical and genetic aspects (review)].

Khmelenina VN, Rozova N, But CY, Mustakhimov II, Reshetnikov AS, Beschastnyi AP, Trotsenko YA.

Prikl Biokhim Mikrobiol. 2015 Mar-Apr;51(2):140-50. Review. Russian.

PMID:
26027349
29.

[Aerobic methylobacteria as promising objects of modern biotechnology].

Doronina NV, Toronskava L, Fedorov DN, Trotsenko YA.

Prikl Biokhim Mikrobiol. 2015 Mar-Apr;51(2):111-21. Review. Russian.

PMID:
26027346
30.

[Functional activity of the modA, gene in Methylobacterium dichloromethanicum DM4].

Firsova YE, Trotsenko YA.

Mikrobiologiia. 2014 May-Jun;83(3):295-301. Russian.

PMID:
25844439
31.

Methylobrevis pamukkalensis gen. nov., sp. nov., a halotolerant restricted facultative methylotroph isolated from saline water.

Poroshina MN, Trotsenko YA, Doronina NV.

Int J Syst Evol Microbiol. 2015 Apr;65(Pt 4):1321-7. doi: 10.1099/ijs.0.000105. Epub 2015 Feb 9.

PMID:
25667389
32.

Sucrose metabolism in halotolerant methanotroph Methylomicrobium alcaliphilum 20Z.

But SY, Khmelenina VN, Reshetnikov AS, Mustakhimov II, Kalyuzhnaya MG, Trotsenko YA.

Arch Microbiol. 2015 Apr;197(3):471-80. doi: 10.1007/s00203-015-1080-9. Epub 2015 Jan 11.

PMID:
25577257
33.

Role of NAD⁺-Dependent Malate Dehydrogenase in the Metabolism of Methylomicrobium alcaliphilum 20Z and Methylosinus trichosporium OB3b.

Rozova ON, Khmelenina VN, Bocharova KA, Mustakhimov II, Trotsenko YA.

Microorganisms. 2015 Feb 27;3(1):47-59. doi: 10.3390/microorganisms3010047.

34.

Highly efficient methane biocatalysis revealed in a methanotrophic bacterium.

Kalyuzhnaya MG, Yang S, Rozova ON, Smalley NE, Clubb J, Lamb A, Gowda GA, Raftery D, Fu Y, Bringel F, Vuilleumier S, Beck DA, Trotsenko YA, Khmelenina VN, Lidstrom ME.

Nat Commun. 2013;4:2785. doi: 10.1038/ncomms3785.

PMID:
24302011
35.

Methyloversatilis thermotolerans sp. nov., a novel thermotolerant facultative methylotroph isolated from a hot spring.

Doronina NV, Kaparullina EN, Trotsenko YA.

Int J Syst Evol Microbiol. 2014 Jan;64(Pt 1):158-64. doi: 10.1099/ijs.0.055046-0. Epub 2013 Sep 18.

PMID:
24048869
36.

Bifunctional sucrose phosphate synthase/phosphatase is involved in the sucrose biosynthesis by Methylobacillus flagellatus KT.

But SY, Khmelenina VN, Reshetnikov AS, Trotsenko YA.

FEMS Microbiol Lett. 2013 Oct;347(1):43-51. doi: 10.1111/1574-6968.12219. Epub 2013 Aug 12.

37.

Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium.

Khmelenina VN, Beck DA, Munk C, Davenport K, Daligault H, Erkkila T, Goodwin L, Gu W, Lo CC, Scholz M, Teshima H, Xu Y, Chain P, Bringel F, Vuilleumier S, Dispirito A, Dunfield P, Jetten MS, Klotz MG, Knief C, Murrell JC, Op den Camp HJ, Sakai Y, Semrau J, Svenning M, Stein LY, Trotsenko YA, Kalyuzhnaya MG.

Genome Announc. 2013 Jun 27;1(4). pii: e00053-13. doi: 10.1128/genomeA.00053-13.

38.

1-Aminocyclopropane-1-carboxylate (ACC) deaminases from Methylobacterium radiotolerans and Methylobacterium nodulans with higher specificity for ACC.

Fedorov DN, Ekimova GA, Doronina NV, Trotsenko YA.

FEMS Microbiol Lett. 2013 Jun;343(1):70-6. doi: 10.1111/1574-6968.12133. Epub 2013 Apr 11.

39.

Methyloligella halotolerans gen. nov., sp. nov. and Methyloligella solikamskensis sp. nov., two non-pigmented halotolerant obligately methylotrophic bacteria isolated from the Ural saline environments.

Doronina NV, Poroshina MN, Kaparullina EN, Ezhov VA, Trotsenko YA.

Syst Appl Microbiol. 2013 May;36(3):148-54. doi: 10.1016/j.syapm.2012.12.001. Epub 2013 Jan 23.

PMID:
23351489
40.

Methylomonas paludis sp. nov., the first acid-tolerant member of the genus Methylomonas, from an acidic wetland.

Danilova OV, Kulichevskaya IS, Rozova ON, Detkova EN, Bodelier PL, Trotsenko YA, Dedysh SN.

Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):2282-9. doi: 10.1099/ijs.0.045658-0. Epub 2012 Nov 16.

PMID:
23159751
41.

Methylopila musalis sp. nov., an aerobic, facultatively methylotrophic bacterium isolated from banana fruit.

Doronina NV, Kaparullina EN, Bykova TV, Trotsenko YA.

Int J Syst Evol Microbiol. 2013 May;63(Pt 5):1847-52. doi: 10.1099/ijs.0.042028-0. Epub 2012 Sep 14.

PMID:
22984139
42.

Role of EctR as transcriptional regulator of ectoine biosynthesis genes in Methylophaga thalassica.

Mustakhimov II, Reshetnikov AS, Fedorov DN, Khmelenina VN, Trotsenko YA.

Biochemistry (Mosc). 2012 Aug;77(8):857-63. doi: 10.1134/S0006297912080068.

PMID:
22860907
43.

Properties of recombinant ATP-dependent fructokinase from the halotolerant methanotroph Methylomicrobium alcaliphilum 20Z.

But SY, Rozova ON, Khmelenina VN, Reshetnikov AS, Trotsenko YA.

Biochemistry (Mosc). 2012 Apr;77(4):372-7. doi: 10.1134/S0006297912040086.

PMID:
22809156
44.

Characterization of recombinant PPi-dependent 6-phosphofructokinases from Methylosinus trichosporium OB3b and Methylobacterium nodulans ORS 2060.

Rozova ON, Khmelenina VN, Trotsenko YA.

Biochemistry (Mosc). 2012 Mar;77(3):288-95. doi: 10.1134/S0006297912030078.

PMID:
22803946
45.

Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z.

Vuilleumier S, Khmelenina VN, Bringel F, Reshetnikov AS, Lajus A, Mangenot S, Rouy Z, Op den Camp HJ, Jetten MS, Dispirito AA, Dunfield P, Klotz MG, Semrau JD, Stein LY, Barbe V, Médigue C, Trotsenko YA, Kalyuzhnaya MG.

J Bacteriol. 2012 Jan;194(2):551-2. doi: 10.1128/JB.06392-11.

46.

Diversity and phylogeny of the ectoine biosynthesis genes in aerobic, moderately halophilic methylotrophic bacteria.

Reshetnikov AS, Khmelenina VN, Mustakhimov II, Kalyuzhnaya M, Lidstrom M, Trotsenko YA.

Extremophiles. 2011 Nov;15(6):653-63. doi: 10.1007/s00792-011-0396-x. Epub 2011 Oct 5.

PMID:
21971967
47.

Methylophaga lonarensis sp. nov., a moderately haloalkaliphilic methylotroph isolated from the soda lake sediments of a meteorite impact crater.

Antony CP, Doronina NV, Boden R, Trotsenko YA, Shouche YS, Murrell JC.

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1613-8. doi: 10.1099/ijs.0.035089-0. Epub 2011 Sep 2.

PMID:
21890731
48.

Methylobacillus arboreus sp. nov., and Methylobacillus gramineus sp. nov., novel non-pigmented obligately methylotrophic bacteria associated with plants.

Gogleva AA, Kaparullina EN, Doronina NV, Trotsenko YA.

Syst Appl Microbiol. 2011 Nov;34(7):477-81. doi: 10.1016/j.syapm.2011.03.005. Epub 2011 Jun 2.

PMID:
21640537
49.

Genes and enzymes of ectoine biosynthesis in halotolerant methanotrophs.

Reshetnikov AS, Khmelenina VN, Mustakhimov II, Trotsenko YA.

Methods Enzymol. 2011;495:15-30. doi: 10.1016/B978-0-12-386905-0.00002-4. Review.

PMID:
21419912
50.

Characterization of the recombinant pyrophosphate-dependent 6-phosphofructokinases from Methylomicrobium alcaliphilum 20Z and Methylococcus capsulatus Bath.

Khmelenina VN, Rozova ON, Trotsenko YA.

Methods Enzymol. 2011;495:1-14. doi: 10.1016/B978-0-12-386905-0.00001-2.

PMID:
21419911

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