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Items: 18

1.

Individuality and convergence of the infant gut microbiota during the first year of life.

de Muinck EJ, Trosvik P.

Nat Commun. 2018 Jun 8;9(1):2233. doi: 10.1038/s41467-018-04641-7.

2.

Multilevel social structure and diet shape the gut microbiota of the gelada monkey, the only grazing primate.

Trosvik P, de Muinck EJ, Rueness EK, Fashing PJ, Beierschmitt EC, Callingham KR, Kraus JB, Trew TH, Moges A, Mekonnen A, Venkataraman VV, Nguyen N.

Microbiome. 2018 May 5;6(1):84. doi: 10.1186/s40168-018-0468-6.

3.

Ecological plasticity in the gastrointestinal microbiomes of Ethiopian Chlorocebus monkeys.

Trosvik P, Rueness EK, de Muinck EJ, Moges A, Mekonnen A.

Sci Rep. 2018 Jan 8;8(1):20. doi: 10.1038/s41598-017-18435-2.

4.

Linking Spatial Structure and Community-Level Biotic Interactions through Cooccurrence and Time Series Modeling of the Human Intestinal Microbiota.

de Muinck EJ, Lundin KEA, Trosvik P.

mSystems. 2017 Sep 5;2(5). pii: e00086-17. doi: 10.1128/mSystems.00086-17. eCollection 2017 Sep-Oct.

5.

A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform.

de Muinck EJ, Trosvik P, Gilfillan GD, Hov JR, Sundaram AYM.

Microbiome. 2017 Jul 6;5(1):68. doi: 10.1186/s40168-017-0279-1.

6.

Microsatellite Length Scoring by Single Molecule Real Time Sequencing - Effects of Sequence Structure and PCR Regime.

Liljegren MM, de Muinck EJ, Trosvik P.

PLoS One. 2016 Jul 14;11(7):e0159232. doi: 10.1371/journal.pone.0159232. eCollection 2016.

7.

Ecology of bacteria in the human gastrointestinal tract--identification of keystone and foundation taxa.

Trosvik P, de Muinck EJ.

Microbiome. 2015 Oct 12;3:44. doi: 10.1186/s40168-015-0107-4.

8.

Biotic interactions and temporal dynamics of the human gastrointestinal microbiota.

Trosvik P, de Muinck EJ, Stenseth NC.

ISME J. 2015 Mar;9(3):533-41. doi: 10.1038/ismej.2014.147. Epub 2014 Aug 22.

9.

Large-scale genetic structuring of a widely distributed carnivore--the Eurasian lynx (Lynx lynx).

Rueness EK, Naidenko S, Trosvik P, Stenseth NC.

PLoS One. 2014 Apr 2;9(4):e93675. doi: 10.1371/journal.pone.0093675. eCollection 2014.

10.

Context-dependent competition in a model gut bacterial community.

de Muinck EJ, Stenseth NC, Sachse D, Vander Roost J, Rønningen KS, Rudi K, Trosvik P.

PLoS One. 2013 Jun 14;8(6):e67210. doi: 10.1371/journal.pone.0067210. Print 2013.

11.

Comparisons of infant Escherichia coli isolates link genomic profiles with adaptation to the ecological niche.

de Muinck EJ, Lagesen K, Afset JE, Didelot X, Rønningen KS, Rudi K, Stenseth NC, Trosvik P.

BMC Genomics. 2013 Feb 5;14:81. doi: 10.1186/1471-2164-14-81.

12.

Prevention of intestinal Campylobacter jejuni colonization in broilers by combinations of in-feed organic acids.

Skånseng B, Kaldhusdal M, Moen B, Gjevre AG, Johannessen GS, Sekelja M, Trosvik P, Rudi K.

J Appl Microbiol. 2010 Oct;109(4):1265-73. doi: 10.1111/j.1365-2672.2010.04766.x. Epub 2010 Aug 19.

13.

Web of ecological interactions in an experimental gut microbiota.

Trosvik P, Rudi K, Straetkvern KO, Jakobsen KS, Naes T, Stenseth NC.

Environ Microbiol. 2010 Oct;12(10):2677-87. doi: 10.1111/j.1462-2920.2010.02236.x. Review.

PMID:
20482738
14.

Convergent temporal dynamics of the human infant gut microbiota.

Trosvik P, Stenseth NC, Rudi K.

ISME J. 2010 Feb;4(2):151-8. doi: 10.1038/ismej.2009.96. Epub 2009 Aug 27.

PMID:
19710708
15.

Characterizing mixed microbial population dynamics using time-series analysis.

Trosvik P, Rudi K, Naes T, Kohler A, Chan KS, Jakobsen KS, Stenseth NC.

ISME J. 2008 Jul;2(7):707-15. doi: 10.1038/ismej.2008.36. Epub 2008 Apr 3.

PMID:
18385770
16.

Co-infection dynamics of a major food-borne zoonotic pathogen in chicken.

Skånseng B, Trosvik P, Zimonja M, Johnsen G, Bjerrum L, Pedersen K, Wallin N, Rudi K.

PLoS Pathog. 2007 Nov;3(11):e175.

17.

Use of multivariate statistics for 16S rRNA gene analysis of microbial communities.

Rudi K, Zimonja M, Trosvik P, Naes T.

Int J Food Microbiol. 2007 Nov 30;120(1-2):95-9. Epub 2007 Jun 12. Review.

PMID:
17602772
18.

Multivariate analysis of complex DNA sequence electropherograms for high-throughput quantitative analysis of mixed microbial populations.

Trosvik P, Skånseng B, Jakobsen KS, Stenseth NC, Naes T, Rudi K.

Appl Environ Microbiol. 2007 Aug;73(15):4975-83. Epub 2007 Jun 15.

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