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Items: 42

1.

Nomenclature for endogenous retrovirus (ERV) loci.

Gifford RJ, Blomberg J, Coffin JM, Fan H, Heidmann T, Mayer J, Stoye J, Tristem M, Johnson WE.

Retrovirology. 2018 Aug 28;15(1):59. doi: 10.1186/s12977-018-0442-1. Review.

2.

Ortervirales: New Virus Order Unifying Five Families of Reverse-Transcribing Viruses.

Krupovic M, Blomberg J, Coffin JM, Dasgupta I, Fan H, Geering AD, Gifford R, Harrach B, Hull R, Johnson W, Kreuze JF, Lindemann D, Llorens C, Lockhart B, Mayer J, Muller E, Olszewski NE, Pappu HR, Pooggin MM, Richert-Pöggeler KR, Sabanadzovic S, Sanfaçon H, Schoelz JE, Seal S, Stavolone L, Stoye JP, Teycheney PY, Tristem M, Koonin EV, Kuhn JH.

J Virol. 2018 May 29;92(12). pii: e00515-18. doi: 10.1128/JVI.00515-18. Print 2018 Jun 15. No abstract available.

3.

Novel Denisovan and Neanderthal retroviruses.

Lee A, Huntley D, Aiewsakun P, Kanda RK, Lynn C, Tristem M.

J Virol. 2014 Nov;88(21):12907-9. doi: 10.1128/JVI.01825-14. Epub 2014 Aug 20.

4.

Exploring the effects of immunity and life history on the dynamics of an endogenous retrovirus.

Kanda RK, Tristem M, Coulson T.

Philos Trans R Soc Lond B Biol Sci. 2013 Aug 12;368(1626):20120505. doi: 10.1098/rstb.2012.0505. Print 2013 Sep 19.

5.

Identification of an ancient endogenous retrovirus, predating the divergence of the placental mammals.

Lee A, Nolan A, Watson J, Tristem M.

Philos Trans R Soc Lond B Biol Sci. 2013 Aug 12;368(1626):20120503. doi: 10.1098/rstb.2012.0503. Print 2013 Sep 19.

6.

Evolution of endogenous retroviruses in the Suidae: evidence for different viral subpopulations in African and Eurasian host species.

Nascimento FF, Gongora J, Charleston M, Tristem M, Lowden S, Moran C.

BMC Evol Biol. 2011 May 24;11:139. doi: 10.1186/1471-2148-11-139.

7.

Distinctive differences in long terminal repeat sequences between γ1 endogenous retroviruses of African and Eurasian suid species.

do Nascimento FF, Gongora J, Tristem M, Lowden S, Moran C.

Infect Genet Evol. 2011 Apr;11(3):686-93. doi: 10.1016/j.meegid.2011.01.010. Epub 2011 Jan 21.

PMID:
21256982
8.

Macroevolution of complex retroviruses.

Katzourakis A, Gifford RJ, Tristem M, Gilbert MT, Pybus OG.

Science. 2009 Sep 18;325(5947):1512. doi: 10.1126/science.1174149.

9.

A transitional endogenous lentivirus from the genome of a basal primate and implications for lentivirus evolution.

Gifford RJ, Katzourakis A, Tristem M, Pybus OG, Winters M, Shafer RW.

Proc Natl Acad Sci U S A. 2008 Dec 23;105(51):20362-7. doi: 10.1073/pnas.0807873105. Epub 2008 Dec 15.

10.

Effects of recombination rate on human endogenous retrovirus fixation and persistence.

Katzourakis A, Pereira V, Tristem M.

J Virol. 2007 Oct;81(19):10712-7. Epub 2007 Jul 18.

11.

Rate of recombinational deletion among human endogenous retroviruses.

Belshaw R, Watson J, Katzourakis A, Howe A, Woolven-Allen J, Burt A, Tristem M.

J Virol. 2007 Sep;81(17):9437-42. Epub 2007 Jun 20.

12.

Discovery and analysis of the first endogenous lentivirus.

Katzourakis A, Tristem M, Pybus OG, Gifford RJ.

Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6261-5. Epub 2007 Mar 23.

13.
14.

Evolution and distribution of class II-related endogenous retroviruses.

Gifford R, Kabat P, Martin J, Lynch C, Tristem M.

J Virol. 2005 May;79(10):6478-86.

15.

High copy number in human endogenous retrovirus families is associated with copying mechanisms in addition to reinfection.

Belshaw R, Katzourakis A, Paces J, Burt A, Tristem M.

Mol Biol Evol. 2005 Apr;22(4):814-7. Epub 2005 Jan 19.

PMID:
15659556
16.

Long-term reinfection of the human genome by endogenous retroviruses.

Belshaw R, Pereira V, Katzourakis A, Talbot G, Paces J, Burt A, Tristem M.

Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4894-9. Epub 2004 Mar 25.

17.
18.

The evolution, distribution and diversity of endogenous retroviruses.

Gifford R, Tristem M.

Virus Genes. 2003 May;26(3):291-315. Review.

PMID:
12876457
19.
20.
22.

Systematic screening of Anopheles mosquito genomes yields evidence for a major clade of Pao-like retrotransposons.

Cook JM, Martin J, Lewin A, Sinden RE, Tristem M.

Insect Mol Biol. 2000 Feb;9(1):109-17.

PMID:
10672078
23.

Identification of multiple Gypsy LTR-retrotransposon lineages in vertebrate genomes.

Miller K, Lynch C, Martin J, Herniou E, Tristem M.

J Mol Evol. 1999 Sep;49(3):358-66.

PMID:
10473777
24.

Identification and expression of two baculovirus gp37 genes.

Phanis CG, Miller DP, Cassar SC, Tristem M, Thiem SM, O'Reilly DR.

J Gen Virol. 1999 Jul;80 ( Pt 7):1823-31.

PMID:
10423152
25.

Interclass transmission and phyletic host tracking in murine leukemia virus-related retroviruses.

Martin J, Herniou E, Cook J, O'Neill RW, Tristem M.

J Virol. 1999 Mar;73(3):2442-9.

26.

Identification and characterization of the Cydia pomonella granulovirus cathepsin and chitinase genes.

Kang W, Tristem M, Maeda S, Crook NE, O'Reilly DR.

J Gen Virol. 1998 Sep;79 ( Pt 9):2283-92.

PMID:
9747739
27.

Retroviral diversity and distribution in vertebrates.

Herniou E, Martin J, Miller K, Cook J, Wilkinson M, Tristem M.

J Virol. 1998 Jul;72(7):5955-66.

28.

Complex evolutionary history of primate lentiviral vpr genes.

Tristem M, Purvis A, Quicke DL.

Virology. 1998 Jan 20;240(2):232-7.

29.

'SINEs of the times' - transposable elements as clade markers for their hosts.

Cook JM, Tristem M.

Trends Ecol Evol. 1997 Aug;12(8):295-7. doi: 10.1016/S0169-5347(97)01121-X. No abstract available.

PMID:
21238081
30.

Human endogenous retrovirus type I-related viruses have an apparently widespread distribution within vertebrates.

Martin J, Herniou E, Cook J, Waugh O'Neill R, Tristem M.

J Virol. 1997 Jan;71(1):437-43.

31.

Human endogenous retrovirus HC2 is a new member of the S71 retroviral subgroup with a full-length pol gene.

Kabát P, Tristem M, Opavský R, Pastorek J.

Virology. 1996 Dec 1;226(1):83-94.

32.

Characterization of the ecdysteroid UDP-glucosyltransferase gene from Mamestra brassicae nucleopolyhedrovirus.

Clarke EE, Tristem M, Cory JS, O'Reilly DR.

J Gen Virol. 1996 Nov;77 ( Pt 11):2865-71.

PMID:
8922482
33.

Characterization of a novel murine leukemia virus-related subgroup within mammals.

Tristem M, Kabat P, Lieberman L, Linde S, Karpas A, Hill F.

J Virol. 1996 Nov;70(11):8241-6.

34.

Three retroviral sequences in amphibians are distinct from those in mammals and birds.

Tristem M, Herniou E, Summers K, Cook J.

J Virol. 1996 Jul;70(7):4864-70.

35.

Amplification of divergent retroelements by PCR.

Tristem M.

Biotechniques. 1996 Apr;20(4):608-12. No abstract available.

36.

Easel, a gypsy LTR-retrotransposon in the Salmonidae.

Tristem M, Kabat P, Herniou E, Karpas A, Hill F.

Mol Gen Genet. 1995 Nov 15;249(2):229-36.

PMID:
7500945
37.

A highly divergent retroviral sequence in the tuatara (Sphenodon).

Tristem M, Myles T, Hill F.

Virology. 1995 Jun 20;210(1):206-11.

38.

Evolution of the primate lentiviruses: evidence from vpx and vpr.

Tristem M, Marshall C, Karpas A, Hill F.

EMBO J. 1992 Sep;11(9):3405-12.

40.
41.

Origin of vpx in lentiviruses.

Tristem M, Marshall C, Karpas A, Petrik J, Hill F.

Nature. 1990 Sep 27;347(6291):341-2. No abstract available.

PMID:
2145513
42.

Six new isolates of human immunodeficiency virus type 2 (HIV-2) and the molecular characterization of one (HIV-2CAM2).

Tristem M, Mansinho K, Champalimaud JL, Ayres L, Karpas A.

J Gen Virol. 1989 Feb;70 ( Pt 2):479-84.

PMID:
2732697

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