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Items: 1 to 50 of 163

1.

Transmitted HIV-1 Drug Resistance in a Treatment-Naive Cohort of Recently Infected Individuals from Chennai, India.

Nesakumar M, Haribabu H, Cheedarla N, Karunaianantham R, Kailasam N, Sathyamurthi P, Selvachithiram M, Tripathy SP, Hanna LE.

AIDS Res Hum Retroviruses. 2019 Aug;35(8):775-779. doi: 10.1089/AID.2019.0022. Epub 2019 May 29.

PMID:
31001987
2.

Genome Sequencing of Polydrug-, Multidrug-, and Extensively Drug-Resistant Mycobacterium tuberculosis Strains from South India.

Shanmugam S, Kumar N, Nair D, Natrajan M, Tripathy SP, Peacock SJ, Swaminathan S, Ranganathan UD.

Microbiol Resour Announc. 2019 Mar 21;8(12). pii: e01388-18. doi: 10.1128/MRA.01388-18.

3.

Burden of pulmonary tuberculosis in modern prison: A cross sectional prevalence survey from south India.

Dolla CK, Dhanraj B, Malaisamy M, Padma Priyadarshini C, Syeed Hissar S, Natrajan M, Krishnan R, Tripathy SP.

Indian J Tuberc. 2019 Jan;66(1):189-192. doi: 10.1016/j.ijtb.2018.10.007. Epub 2018 Nov 13.

PMID:
30878067
4.

Whole Genome Sequencing of Mycobacterium tuberculosis Clinical Isolates From India Reveals Genetic Heterogeneity and Region-Specific Variations That Might Affect Drug Susceptibility.

Advani J, Verma R, Chatterjee O, Pachouri PK, Upadhyay P, Singh R, Yadav J, Naaz F, Ravikumar R, Buggi S, Suar M, Gupta UD, Pandey A, Chauhan DS, Tripathy SP, Gowda H, Prasad TSK.

Front Microbiol. 2019 Feb 26;10:309. doi: 10.3389/fmicb.2019.00309. eCollection 2019.

5.

Current trends in tuberculosis vaccine.

Soundarya JSV, Ranganathan UD, Tripathy SP.

Med J Armed Forces India. 2019 Jan;75(1):18-24. doi: 10.1016/j.mjafi.2018.12.013. Epub 2019 Jan 18. Review.

PMID:
30705473
6.

Cross Type Neutralizing Antibodies Detected in a Unique HIV-2 Infected Individual From India.

Vidyavijayan KK, Cheedarala N, Babu H, Precilla LK, Sathyamurthi P, Chandrasekaran P, Murugavel KG, Swaminathan S, Tripathy SP, Hanna LE.

Front Immunol. 2018 Dec 17;9:2841. doi: 10.3389/fimmu.2018.02841. eCollection 2018.

7.

Tuberculosis preventive treatment: the next chapter of tuberculosis elimination in India.

Moonan PK, Nair SA, Agarwal R, Chadha VK, Dewan PK, Gupta UD, Ho CS, Holtz TH, Kumar AM, Kumar N, Kumar P, Maloney SA, Mase SR, Oeltmann JE, Paramasivan CN, Parmar MM, Rade KK, Ramachandran R, Rao R, Salhorta VS, Sarin R, Sarin S, Sachdeva KS, Selvaraju S, Singla R, Surie D, Tonsing J, Tripathy SP, Khaparde SD.

BMJ Glob Health. 2018 Oct 8;3(5):e001135. doi: 10.1136/bmjgh-2018-001135. eCollection 2018.

8.

Mapping of Neutralizing Antibody Epitopes on the Envelope of Viruses Obtained from Plasma Samples Exhibiting Broad Cross-Clade Neutralization Potential Against HIV-1.

Cheedarla N, Sundaramurthi JC, Hemalatha B, Anangi B, Nesakumar M, Ashokkumar M, Vidya Vijayan KK, Tripathy SP, Swaminathan S, Vaniambadi SK, Ramanathan DV, Hanna LE.

AIDS Res Hum Retroviruses. 2019 Feb;35(2):169-184. doi: 10.1089/AID.2018.0224. Epub 2018 Dec 20.

PMID:
30328700
9.

Sensory Memory Is Allocated Exclusively to the Current Event-Segment.

Tripathy SP, Öǧmen H.

Front Psychol. 2018 Sep 7;9:1435. doi: 10.3389/fpsyg.2018.01435. eCollection 2018.

10.

Rise of Clinical Microbial Proteogenomics: A Multiomics Approach to Nontuberculous Mycobacterium-The Case of Mycobacterium abscessus UC22.

Advani J, Verma R, Chatterjee O, Devasahayam Arokia Balaya R, Najar MA, Ravishankara N, Suresh S, Pachori PK, Gupta UD, Pinto SM, Chauhan DS, Tripathy SP, Gowda H, Prasad TSK.

OMICS. 2019 Jan;23(1):1-16. doi: 10.1089/omi.2018.0116. Epub 2018 Sep 12.

PMID:
30207826
11.

Evolution of Neutralization Response in HIV-1 Subtype C-Infected Individuals Exhibiting Broad Cross-Clade Neutralization of HIV-1 Strains.

Cheedarla N, Hemalatha B, Anangi B, Muthuramalingam K, Selvachithiram M, Sathyamurthi P, Kailasam N, Varadarajan R, Swaminathan S, Tripathy SP, Vaniambadi SK, Vadakkupattu DR, Hanna LE.

Front Immunol. 2018 Mar 27;9:618. doi: 10.3389/fimmu.2018.00618. eCollection 2018.

12.

Daily vs Intermittent Antituberculosis Therapy for Pulmonary Tuberculosis in Patients With HIV: A Randomized Clinical Trial.

Gopalan N, Santhanakrishnan RK, Palaniappan AN, Menon PA, Lakshman S, Chandrasekaran P, Sivaramakrishnan GN, Reddy D, Kannabiran BP, Agiboth HKK, Krishnamoorthy V, Rathinam S, Chockalingam C, Manoharan T, Ayyamperumal M, Jayanthi N, Satagopan K, Narayanan R, Krishnaraja R, Sathiyavelu S, Kesavamurthy B, Suresh C, Selvachitiram M, Arasan G, Susaimuthu S, Rathinam P, Angamuthu P, Jayabal L, Murali L, Ramachandran R, Tripathy SP, Swaminathan S.

JAMA Intern Med. 2018 Apr 1;178(4):485-493. doi: 10.1001/jamainternmed.2018.0141.

13.

Unique Phenotypic Characteristics of Recently Transmitted HIV-1 Subtype C Envelope Glycoprotein gp120: Use of CXCR6 Coreceptor by Transmitted Founder Viruses.

Ashokkumar M, Aralaguppe SG, Tripathy SP, Hanna LE, Neogi U.

J Virol. 2018 Apr 13;92(9). pii: e00063-18. doi: 10.1128/JVI.00063-18. Print 2018 May 1.

14.

Tuberculosis among the homeless in Chennai city, South India.

Dolla C, Padmapriyadarsini C, Pradeep Menon A, Muniyandi M, Adinarayanan S, Sekar G, Kavitha D, Tripathy SP, Swaminathan S.

Trans R Soc Trop Med Hyg. 2017 Oct 1;111(10):479-481. doi: 10.1093/trstmh/trx081.

PMID:
29346636
15.

Generation and application of LET calibration curve for neutron dosimetry using CR-39 detector and microwave induced chemical etching.

Tripathy SP, Sahoo GS, Paul S, Kumar P, Sharma SD, Santra S, Pal A, Kundu A, Bandyopadhyay T, Avasthi DK.

Rev Sci Instrum. 2017 Jun;88(6):063301. doi: 10.1063/1.4984621.

PMID:
28667951
16.

Molecular Characteristics of the Envelope of Vertically Transmitted HIV-1 Strains from Infants with HIV Infection.

Ashokkumar M, Nesakumar M, Cheedarla N, Vidyavijayan KK, Babu H, Tripathy SP, Hanna LE.

AIDS Res Hum Retroviruses. 2017 Aug;33(8):796-806. doi: 10.1089/AID.2016.0260. Epub 2017 Jun 19.

PMID:
28401776
17.

Quantitative Proteomic and Phosphoproteomic Analysis of H37Ra and H37Rv Strains of Mycobacterium tuberculosis.

Verma R, Pinto SM, Patil AH, Advani J, Subba P, Kumar M, Sharma J, Dey G, Ravikumar R, Buggi S, Satishchandra P, Sharma K, Suar M, Tripathy SP, Chauhan DS, Gowda H, Pandey A, Gandotra S, Prasad TS.

J Proteome Res. 2017 Apr 7;16(4):1632-1645. doi: 10.1021/acs.jproteome.6b00983. Epub 2017 Mar 20.

PMID:
28241730
18.

The reference frame for encoding and retention of motion depends on stimulus set size.

Huynh D, Tripathy SP, Bedell HE, Öğmen H.

Atten Percept Psychophys. 2017 Apr;79(3):888-910. doi: 10.3758/s13414-016-1258-5.

PMID:
28092077
19.

Variability in V1V2 and PNGs in Pediatric HIV-1 Viral Variants Transmitted Through Vertical Route.

Ashokkumar M, Tripathy SP, Hanna LE.

AIDS Res Hum Retroviruses. 2016 Oct/Nov;32(10-11):942-943. Epub 2016 Jun 16. No abstract available.

PMID:
27309849
20.

Viability of Mycobacterium leprae in the environment and its role in leprosy dissemination.

Mohanty PS, Naaz F, Katara D, Misba L, Kumar D, Dwivedi DK, Tiwari AK, Chauhan DS, Bansal AK, Tripathy SP, Katoch K.

Indian J Dermatol Venereol Leprol. 2016 Jan-Feb;82(1):23-7. doi: 10.4103/0378-6323.168935.

21.

Outcome of patients on second line antiretroviral therapy under programmatic condition in India.

Chakravarty J, Sundar S, Chourasia A, Singh PN, Kurle S, Tripathy SP, Chaturbhuj DN, Rai M, Agarwal AK, Mishra RN, Paranjape RS.

BMC Infect Dis. 2015 Nov 14;15:517. doi: 10.1186/s12879-015-1270-8.

22.

Stream specificity and asymmetries in feature binding and content-addressable access in visual encoding and memory.

Huynh DL, Tripathy SP, Bedell HE, Ögmen H.

J Vis. 2015;15(13):14. doi: 10.1167/15.13.14.

PMID:
26382005
23.

A network map of Interleukin-10 signaling pathway.

Verma R, Balakrishnan L, Sharma K, Khan AA, Advani J, Gowda H, Tripathy SP, Suar M, Pandey A, Gandotra S, Prasad TS, Shankar S.

J Cell Commun Signal. 2016 Mar;10(1):61-7. doi: 10.1007/s12079-015-0302-x. Epub 2015 Aug 8.

24.

Effects of high neutron doses and duration of the chemical etching on the optical properties of CR-39.

Sahoo GS, Tripathy SP, Paul S, Sharma SC, Joshi DS, Gupta AK, Bandyopadhyay T.

Appl Radiat Isot. 2015 Jul;101:114-121. doi: 10.1016/j.apradiso.2015.04.002. Epub 2015 Apr 9.

PMID:
25889876
25.

Large crowding zones in peripheral vision for briefly presented stimuli.

Tripathy SP, Cavanagh P, Bedell HE.

J Vis. 2014 Dec 30;14(6):11. doi: 10.1167/14.6.11.

PMID:
25550071
26.

Neutron dose estimation via LET spectrometry using CR-39 detector for the reaction (9)Be (p, n).

Sahoo GS, Tripathy SP, Paul S, Sharma SD, Sharma SC, Joshi DS, Bandyopadhyay T.

J Med Phys. 2014 Oct;39(4):225-30. doi: 10.4103/0971-6203.144487.

27.

Effects of neutron irradiation on optical and chemical properties of CR-39: Potential application in neutron dosimetry.

Sahoo GS, Paul S, Tripathy SP, Sharma SC, Jena S, Rout S, Joshi DS, Bandyopadhyay T.

Appl Radiat Isot. 2014 Dec;94:200-205. doi: 10.1016/j.apradiso.2014.08.012. Epub 2014 Aug 28.

PMID:
25218462
28.

Emergence of drug resistance in human immunodeficiency virus type 1 infected patients from pune, India, at the end of 12 months of first line antiretroviral therapy initiation.

Patil RT, Gupta RM, Sen S, Tripathy SP, Chaturbhuj DN, Hingankar NK, Paranjape RS.

ISRN AIDS. 2014 Apr 10;2014:674906. doi: 10.1155/2014/674906. eCollection 2014.

29.

Measurement of neutron spectra generated from bombardment of 4 to 24 MeV protons on a thick ⁹Be target and estimation of neutron yields.

Paul S, Sahoo GS, Tripathy SP, Sharma SC, Ramjilal, Ninawe NG, Sunil C, Gupta AK, Bandyopadhyay T.

Rev Sci Instrum. 2014 Jun;85(6):063501. doi: 10.1063/1.4880202.

PMID:
24985813
30.

Selection of neutron-absorbing materials to improve the low-energy response of a Zr-based extended neutron monitor using Monte Carlo simulations.

Biju K, Sunil C, Tripathy SP, Joshi DS, Bandyopadhyay T, Sarkar PK.

Radiat Prot Dosimetry. 2015 Feb;163(2):160-5. doi: 10.1093/rpd/ncu176. Epub 2014 Jun 2.

PMID:
24891404
31.

Evaluation of a cost effective in-house method for HIV-1 drug resistance genotyping using plasma samples.

Chaturbhuj DN, Nirmalkar AP, Paranjape RS, Tripathy SP.

PLoS One. 2014 Feb 12;9(2):e87441. doi: 10.1371/journal.pone.0087441. eCollection 2014.

32.

Bottlenecks of motion processing during a visual glance: the leaky flask model.

Öğmen H, Ekiz O, Huynh D, Bedell HE, Tripathy SP.

PLoS One. 2013 Dec 31;8(12):e83671. doi: 10.1371/journal.pone.0083671. eCollection 2013.

33.

Prevalence of drug resistance in human immunodeficiency virus type 1-infected treatment-naive children in Pune, India.

Kumar M, Sen S, Gupta RK, Chaturbhuj D, Tripathy SP, Paranjape RS.

AIDS Res Hum Retroviruses. 2014 Mar;30(3):294-8. doi: 10.1089/AID.2013.0222. Epub 2014 Feb 7.

34.

Contribution of medical colleges to tuberculosis control in India under the Revised National Tuberculosis Control Programme (RNTCP): lessons learnt & challenges ahead.

Sharma SK, Mohan A, Chauhan LS, Narain JP, Kumar P, Behera D, Sachdeva KS, Kumar A; Task Force for Involvement of Medical Colleges in Revised National Tuberculosis Control Programme, Agarwal P, Awadh NT, Bansal A, Baruah S, Baruwa P, Balasangameshwara VH, Balasubramanian R, Bhardwaj AK, Bhargav S, Chadha S, Chaddha VK, Chhatwal M, Da Costa AL, Dash DP, Dep J, Dhingra S, Dhooria Harmeet S, Frieden TR, Garg A, Granich R, Gulati V, Gupta D, Gupta D, Gupta KB, Gupta KN, Jaikishan, Janmeja AK, Jawahar MS, Jethani SL, Jindal SK, John KR, Kalra OP, Kalra VP, Kannan AT, Kayshap S, Keshav Chander G, Khushwa SS, Kushwaha RS, Kumar V, Laskar B, Leela Itty Amma KR, Leuva AT, Maitra Malay K, Mesquita AM, Mathew T, Mundade Y, Munje R, Nagpal S, Nagaraja C, Nair S, Narayanan OR, Paramasivan CN, Parmar M, Prasad R, Phukan AC, Prasanna R, Purty A, Ramachandran R, Ramachandran R, Ravindran C, Reddy Raveendra HR, Sahu S, Santosha, Sarin R, Sarkar S, Sarma KC, Saxena P, Sehgal S, Sharath N, Sharma G, Sharma N, Shridhar PK, Shukla RS, Singh O, Singh NT, Singh V, Singla R, Sinha N, Sinha P, Sinha S, Solanki R, Sreenivas A, Srinath S, Subhakar K, Suri JC, Talukdar P, Tonsing J, Tripathy SP, Vaidyanathan P, Vashist RP, Venu K.

Indian J Med Res. 2013 Feb;137(2):283-94.

35.

Evaluations of an in-house drug resistance method for HIV-1 drug resistance using ViroSeq™ 2.0 genotyping system as a gold standard.

Chaturbhuj DN, Deshmukh PS, Hingankar NK, Siddhaarth K, Deshpande SN, Sen S, Kabra S, Paranjape RS, Tripathy SP.

J Virol Methods. 2013 Apr;189(1):87-92. doi: 10.1016/j.jviromet.2013.01.001. Epub 2013 Jan 23.

PMID:
23353551
36.

Influence of correspondence noise and spatial scaling on the upper limit for spatial displacement in fully-coherent random-dot kinematogram stimuli.

Tripathy SP, Shafiullah SN, Cox MJ.

PLoS One. 2012;7(10):e42995. doi: 10.1371/journal.pone.0042995. Epub 2012 Oct 9.

37.

HIV testing in India.

Tripathy S, Pereira M, Tripathy SP.

Clin Lab Med. 2012 Jun;32(2):175-91. doi: 10.1016/j.cll.2012.04.014. Review.

PMID:
22726998
38.

Misperceptions in the trajectories of objects undergoing curvilinear motion.

Yilmaz O, Tripathy SP, Ogmen H.

PLoS One. 2012;7(5):e36511. doi: 10.1371/journal.pone.0036511. Epub 2012 May 17.

39.

Initial virologic response and HIV drug resistance among HIV-infected individuals initiating first-line antiretroviral therapy at 2 clinics in Chennai and Mumbai, India.

Hingankar NK, Thorat SR, Deshpande A, Rajasekaran S, Chandrasekar C, Kumar S, Srikantiah P, Chaturbhuj DN, Datkar SR, Deshmukh PS, Kulkarni SS, Sane S, Reddy DC, Garg R, Jordan MR, Kabra S, Tripathy SP, Paranjape RS.

Clin Infect Dis. 2012 May;54 Suppl 4:S348-54. doi: 10.1093/cid/cis005.

40.

T-cell Epitopes Identified by BALB/c Mice Immunized with Vaccinia Expressing HIV-1 Gag lie within immunodominant Regions Recognized by HIV-infected Indian Patients.

Shete AV, Thakar MR, Tripathy SP, Raut C, Chakrabarti S, Paranjape RS.

J Glob Infect Dis. 2011 Jul;3(3):246-53. doi: 10.4103/0974-777X.83530.

41.

Surveillance of transmitted HIV type 1 drug resistance among HIV type 1-positive women attending an antenatal clinic in Kakinada, India.

Thorat SR, Chaturbhuj DN, Hingankar NK, Chandrasekhar V, Koppada R, Datkar SR, Srikantiah P, Garg R, Kabra S, Haldar P, Reddy DC, Bachani D, Tripathy SP, Paranjape RS.

AIDS Res Hum Retroviruses. 2011 Dec;27(12):1291-7. doi: 10.1089/aid.2011.0036. Epub 2011 Jun 28.

PMID:
21568760
42.

Directional distribution of the ambient neutron dose equivalent from 145-MeV ¹⁹F projectiles incident on thick Al target.

Sunil C, Shanbhag AA, Nandy M, Bandyopadhyay T, Tripathy SP, Lahiri C, Joshi DS, Sarkar PK.

Radiat Prot Dosimetry. 2011 Jan;143(1):4-11. doi: 10.1093/rpd/ncq285. Epub 2010 Oct 28.

PMID:
21030399
43.

High-capacity, transient retention of direction-of-motion information for multiple moving objects.

Shooner C, Tripathy SP, Bedell HE, Ogmen H.

J Vis. 2010 Jun 1;10(6):8. doi: 10.1167/10.6.8.

44.

Transmitted HIV drug resistance among HIV-infected voluntary counseling and testing centers (VCTC) clients in Mumbai, India.

Chaturbhuj DN, Hingankar NK, Srikantiah P, Garg R, Kabra S, Deshmukh PS, Jadhav SD, Thorat SR, Datkar SR, Mehta P, Ingole N, Mathur M, Ramachandran A, Haldar P, Reddy DC, Bachani D, Rao S, Tripathy SP, Paranjape RS.

AIDS Res Hum Retroviruses. 2010 Aug;26(8):927-32. doi: 10.1089/aid.2010.0032.

PMID:
20704495
45.

Human immunodeficiency virus type 1 gp 41 mutations in proviral DNA among antiretroviral treatment-naive individuals from India.

Sen S, Tripathy SP, Sahni AK, Gupta RM, Kapila K, Chopra GS, Chimanpure VM, Patil AA, Paranjape RS.

AIDS Res Hum Retroviruses. 2009 May;25(5):521-3. doi: 10.1089/aid.2008.0244.

PMID:
19400735
46.

Early age-related decline in the effective number of trajectories tracked in adult human vision.

Kennedy GJ, Tripathy SP, Barrett BT.

J Vis. 2009 Feb 25;9(2):21.1-10. doi: 10.1167/9.2.21.

PMID:
19271931
47.

High replication fitness and transmission efficiency of HIV-1 subtype C from India: Implications for subtype C predominance.

Rodriguez MA, Ding M, Ratner D, Chen Y, Tripathy SP, Kulkarni SS, Chatterjee R, Tarwater PM, Gupta P.

Virology. 2009 Mar 15;385(2):416-24. doi: 10.1016/j.virol.2008.12.025. Epub 2009 Jan 20.

48.

Loss of positional information when tracking multiple moving dots: the role of visual memory.

Narasimhan S, Tripathy SP, Barrett BT.

Vision Res. 2009 Jan;49(1):10-27. doi: 10.1016/j.visres.2008.09.023. Epub 2008 Nov 11.

49.

Profile of primary resistance in HIV-1-infected treatment-naive individuals from Western India.

Lall M, Gupta RM, Sen S, Kapila K, Tripathy SP, Paranjape RS.

AIDS Res Hum Retroviruses. 2008 Jul;24(7):987-90. doi: 10.1089/aid.2008.0079.

PMID:
18593351
50.

On the effective number of tracked trajectories in amblyopic human vision.

Tripathy SP, Levi DM.

J Vis. 2008 Apr 15;8(4):8.1-22. doi: 10.1167/8.4.8.

PMID:
18484847

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