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Items: 1 to 50 of 64

1.

NIN acts as a Network Hub Controlling a Growth Module Required for Rhizobial Infection.

Liu CW, Breakspear A, Guan D, Cerri MR, Abbs K, Jiang S, Robson FC, Radhakrishnan G, Roy S, Bone C, Stacey N, Rogers C, Trick M, Niebel A, Oldroyd GE, de Carvalho-Niebel F, Murray JD.

Plant Physiol. 2019 Feb 1. pii: pp.01572.2018. doi: 10.1104/pp.18.01572. [Epub ahead of print]

2.

Spatio-temporal expression dynamics differ between homologues of flowering time genes in the allopolyploid Brassica napus.

Jones DM, Wells R, Pullen N, Trick M, Irwin JA, Morris RJ.

Plant J. 2018 Oct;96(1):103-118. doi: 10.1111/tpj.14020. Epub 2018 Aug 24.

3.

Dissecting the complex regulation of lodging resistance in Brassica napus.

Miller CN, Harper AL, Trick M, Wellner N, Werner P, Waldron KW, Bancroft I.

Mol Breed. 2018;38(3):30. doi: 10.1007/s11032-018-0781-6. Epub 2018 Feb 21.

4.

Discovery and Biosynthesis of the Antibiotic Bicyclomycin in Distantly Related Bacterial Classes.

Vior NM, Lacret R, Chandra G, Dorai-Raj S, Trick M, Truman AW.

Appl Environ Microbiol. 2018 Apr 16;84(9). pii: e02828-17. doi: 10.1128/AEM.02828-17. Print 2018 May 1.

5.

Auxin-Induced Modulation of ETTIN Activity Orchestrates Gene Expression in Arabidopsis.

Simonini S, Bencivenga S, Trick M, Østergaard L.

Plant Cell. 2017 Aug;29(8):1864-1882. doi: 10.1105/tpc.17.00389. Epub 2017 Aug 13.

6.

Awake1, an ABC-Type Transporter, Reveals an Essential Role for Suberin in the Control of Seed Dormancy.

Fedi F, O'Neill CM, Menard G, Trick M, Dechirico S, Corbineau F, Bailly C, Eastmond PJ, Penfield S.

Plant Physiol. 2017 May;174(1):276-283. doi: 10.1104/pp.16.01556. Epub 2017 Mar 14.

7.

Elucidation of the genetic basis of variation for stem strength characteristics in bread wheat by Associative Transcriptomics.

Miller CN, Harper AL, Trick M, Werner P, Waldron K, Bancroft I.

BMC Genomics. 2016 Jul 16;17:500. doi: 10.1186/s12864-016-2775-2.

8.

The Starch Granule-Associated Protein EARLY STARVATION1 Is Required for the Control of Starch Degradation in Arabidopsis thaliana Leaves.

Feike D, Seung D, Graf A, Bischof S, Ellick T, Coiro M, Soyk S, Eicke S, Mettler-Altmann T, Lu KJ, Trick M, Zeeman SC, Smith AM.

Plant Cell. 2016 Jun;28(6):1472-89. doi: 10.1105/tpc.16.00011. Epub 2016 May 20.

9.

Delineation of metabolic gene clusters in plant genomes by chromatin signatures.

Yu N, Nützmann HW, MacDonald JT, Moore B, Field B, Berriri S, Trick M, Rosser SJ, Kumar SV, Freemont PS, Osbourn A.

Nucleic Acids Res. 2016 Mar 18;44(5):2255-65. doi: 10.1093/nar/gkw100. Epub 2016 Feb 18.

10.

Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics.

Harper AL, McKinney LV, Nielsen LR, Havlickova L, Li Y, Trick M, Fraser F, Wang L, Fellgett A, Sollars ES, Janacek SH, Downie JA, Buggs RJ, Kjær ED, Bancroft I.

Sci Rep. 2016 Jan 13;6:19335. doi: 10.1038/srep19335.

11.

Genome distribution of differential homoeologue contributions to leaf gene expression in bread wheat.

Harper AL, Trick M, He Z, Clissold L, Fellgett A, Griffiths S, Bancroft I.

Plant Biotechnol J. 2016 May;14(5):1207-14. doi: 10.1111/pbi.12486. Epub 2015 Oct 7.

12.

The transcriptome of Euglena gracilis reveals unexpected metabolic capabilities for carbohydrate and natural product biochemistry.

O'Neill EC, Trick M, Hill L, Rejzek M, Dusi RG, Hamilton CJ, Zimba PV, Henrissat B, Field RA.

Mol Biosyst. 2015 Oct;11(10):2808-20. doi: 10.1039/c5mb00319a.

PMID:
26289754
13.

Collinearity analysis of Brassica A and C genomes based on an updated inferred unigene order.

Bancroft I, Fraser F, Morgan C, Trick M.

Data Brief. 2015 Feb 10;3:51-5. doi: 10.1016/j.dib.2015.01.004. eCollection 2015 Jun.

14.

The root hair "infectome" of Medicago truncatula uncovers changes in cell cycle genes and reveals a requirement for Auxin signaling in rhizobial infection.

Breakspear A, Liu C, Roy S, Stacey N, Rogers C, Trick M, Morieri G, Mysore KS, Wen J, Oldroyd GE, Downie JA, Murray JD.

Plant Cell. 2014 Dec;26(12):4680-701. doi: 10.1105/tpc.114.133496. Epub 2014 Dec 19.

15.

A novel and fast approach for population structure inference using kernel-PCA and optimization.

Popescu AA, Harper AL, Trick M, Bancroft I, Huber KT.

Genetics. 2014 Dec;198(4):1421-31. doi: 10.1534/genetics.114.171314. Epub 2014 Oct 16.

16.

Epigenetic reprogramming that prevents transgenerational inheritance of the vernalized state.

Crevillén P, Yang H, Cui X, Greeff C, Trick M, Qiu Q, Cao X, Dean C.

Nature. 2014 Nov 27;515(7528):587-90. doi: 10.1038/nature13722. Epub 2014 Sep 14.

17.

Dissection of the control of anion homeostasis by associative transcriptomics in Brassica napus.

Koprivova A, Harper AL, Trick M, Bancroft I, Kopriva S.

Plant Physiol. 2014 Sep;166(1):442-50. doi: 10.1104/pp.114.239947. Epub 2014 Jul 21.

18.

Associative transcriptomics study dissects the genetic architecture of seed glucosinolate content in Brassica napus.

Lu G, Harper AL, Trick M, Morgan C, Fraser F, O'Neill C, Bancroft I.

DNA Res. 2014 Dec;21(6):613-25. doi: 10.1093/dnares/dsu024. Epub 2014 Jul 15.

19.

Genome-wide association study dissects the genetic architecture of seed weight and seed quality in rapeseed (Brassica napus L.).

Li F, Chen B, Xu K, Wu J, Song W, Bancroft I, Harper AL, Trick M, Liu S, Gao G, Wang N, Yan G, Qiao J, Li J, Li H, Xiao X, Zhang T, Wu X.

DNA Res. 2014 Aug;21(4):355-67. doi: 10.1093/dnares/dsu002. Epub 2014 Feb 7.

20.

The control of seed oil polyunsaturate content in the polyploid crop species Brassica napus.

Wells R, Trick M, Soumpourou E, Clissold L, Morgan C, Werner P, Gibbard C, Clarke M, Jennaway R, Bancroft I.

Mol Breed. 2014;33:349-362. Epub 2013 Sep 21.

21.

Methods to study PAMP-triggered immunity in Brassica species.

Lloyd SR, Schoonbeek HJ, Trick M, Zipfel C, Ridout CJ.

Mol Plant Microbe Interact. 2014 Mar;27(3):286-95. doi: 10.1094/MPMI-05-13-0154-FI.

22.

Sequencing-based variant detection in the polyploid crop oilseed rape.

Wells R, Trick M, Fraser F, Soumpourou E, Clissold L, Morgan C, Pauquet J, Bancroft I.

BMC Plant Biol. 2013 Aug 6;13:111. doi: 10.1186/1471-2229-13-111.

23.

Analysis of the bread wheat genome using whole-genome shotgun sequencing.

Brenchley R, Spannagl M, Pfeifer M, Barker GL, D'Amore R, Allen AM, McKenzie N, Kramer M, Kerhornou A, Bolser D, Kay S, Waite D, Trick M, Bancroft I, Gu Y, Huo N, Luo MC, Sehgal S, Gill B, Kianian S, Anderson O, Kersey P, Dvorak J, McCombie WR, Hall A, Mayer KF, Edwards KJ, Bevan MW, Hall N.

Nature. 2012 Nov 29;491(7426):705-10. doi: 10.1038/nature11650.

24.

Associative transcriptomics of traits in the polyploid crop species Brassica napus.

Harper AL, Trick M, Higgins J, Fraser F, Clissold L, Wells R, Hattori C, Werner P, Bancroft I.

Nat Biotechnol. 2012 Aug;30(8):798-802. No abstract available.

PMID:
22820317
25.

Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus.

Higgins J, Magusin A, Trick M, Fraser F, Bancroft I.

BMC Genomics. 2012 Jun 15;13:247. doi: 10.1186/1471-2164-13-247.

26.

Combining SNP discovery from next-generation sequencing data with bulked segregant analysis (BSA) to fine-map genes in polyploid wheat.

Trick M, Adamski NM, Mugford SG, Jiang CC, Febrer M, Uauy C.

BMC Plant Biol. 2012 Jan 26;12:14. doi: 10.1186/1471-2229-12-14.

27.

The genome of the mesopolyploid crop species Brassica rapa.

Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun JH, Bancroft I, Cheng F, Huang S, Li X, Hua W, Wang J, Wang X, Freeling M, Pires JC, Paterson AH, Chalhoub B, Wang B, Hayward A, Sharpe AG, Park BS, Weisshaar B, Liu B, Li B, Liu B, Tong C, Song C, Duran C, Peng C, Geng C, Koh C, Lin C, Edwards D, Mu D, Shen D, Soumpourou E, Li F, Fraser F, Conant G, Lassalle G, King GJ, Bonnema G, Tang H, Wang H, Belcram H, Zhou H, Hirakawa H, Abe H, Guo H, Wang H, Jin H, Parkin IA, Batley J, Kim JS, Just J, Li J, Xu J, Deng J, Kim JA, Li J, Yu J, Meng J, Wang J, Min J, Poulain J, Wang J, Hatakeyama K, Wu K, Wang L, Fang L, Trick M, Links MG, Zhao M, Jin M, Ramchiary N, Drou N, Berkman PJ, Cai Q, Huang Q, Li R, Tabata S, Cheng S, Zhang S, Zhang S, Huang S, Sato S, Sun S, Kwon SJ, Choi SR, Lee TH, Fan W, Zhao X, Tan X, Xu X, Wang Y, Qiu Y, Yin Y, Li Y, Du Y, Liao Y, Lim Y, Narusaka Y, Wang Y, Wang Z, Li Z, Wang Z, Xiong Z, Zhang Z; Brassica rapa Genome Sequencing Project Consortium.

Nat Genet. 2011 Aug 28;43(10):1035-9. doi: 10.1038/ng.919.

PMID:
21873998
28.

Dissecting the genome of the polyploid crop oilseed rape by transcriptome sequencing.

Bancroft I, Morgan C, Fraser F, Higgins J, Wells R, Clissold L, Baker D, Long Y, Meng J, Wang X, Liu S, Trick M.

Nat Biotechnol. 2011 Jul 31;29(8):762-6. doi: 10.1038/nbt.1926.

PMID:
21804563
29.

Sequence and structure of Brassica rapa chromosome A3.

Mun JH, Kwon SJ, Seol YJ, Kim JA, Jin M, Kim JS, Lim MH, Lee SI, Hong JK, Park TH, Lee SC, Kim BJ, Seo MS, Baek S, Lee MJ, Shin JY, Hahn JH, Hwang YJ, Lim KB, Park JY, Lee J, Yang TJ, Yu HJ, Choi IY, Choi BS, Choi SR, Ramchiary N, Lim YP, Fraser F, Drou N, Soumpourou E, Trick M, Bancroft I, Sharpe AG, Parkin IA, Batley J, Edwards D, Park BS.

Genome Biol. 2010;11(9):R94. doi: 10.1186/gb-2010-11-9-r94. Epub 2010 Sep 27.

30.

An SSR-based genetic linkage map of the model grass Brachypodium distachyon.

Garvin DF, McKenzie N, Vogel JP, Mockler TC, Blankenheim ZJ, Wright J, Cheema JJ, Dicks J, Huo N, Hayden DM, Gu Y, Tobias C, Chang JH, Chu A, Trick M, Michael TP, Bevan MW, Snape JW.

Genome. 2010 Jan;53(1):1-13. doi: 10.1139/g09-079.

PMID:
20130744
31.

Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis.

Trick M, Kwon SJ, Choi SR, Fraser F, Soumpourou E, Drou N, Wang Z, Lee SY, Yang TJ, Mun JH, Paterson AH, Town CD, Pires JC, Pyo Lim Y, Park BS, Bancroft I.

BMC Genomics. 2009 Nov 18;10:539. doi: 10.1186/1471-2164-10-539.

32.

Comparative analysis between homoeologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence.

Cheung F, Trick M, Drou N, Lim YP, Park JY, Kwon SJ, Kim JA, Scott R, Pires JC, Paterson AH, Town C, Bancroft I.

Plant Cell. 2009 Jul;21(7):1912-28. doi: 10.1105/tpc.108.060376. Epub 2009 Jul 14.

33.

A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences.

Trick M, Cheung F, Drou N, Fraser F, Lobenhofer EK, Hurban P, Magusin A, Town CD, Bancroft I.

BMC Plant Biol. 2009 May 8;9:50. doi: 10.1186/1471-2229-9-50.

34.

Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing.

Trick M, Long Y, Meng J, Bancroft I.

Plant Biotechnol J. 2009 May;7(4):334-46. doi: 10.1111/j.1467-7652.2008.00396.x. Epub 2009 Jan 21.

35.

Computational tools for Brassica-Arabidopsis comparative genomics.

Beckett P, Bancroft I, Trick M.

Comp Funct Genomics. 2005;6(3):147-52. doi: 10.1002/cfg.463.

36.

A comparative linkage map of oilseed rape and its use for QTL analysis of seed oil and erucic acid content.

Qiu D, Morgan C, Shi J, Long Y, Liu J, Li R, Zhuang X, Wang Y, Tan X, Dietrich E, Weihmann T, Everett C, Vanstraelen S, Beckett P, Fraser F, Trick M, Barnes S, Wilmer J, Schmidt R, Li J, Li D, Meng J, Bancroft I.

Theor Appl Genet. 2006 Dec;114(1):67-80. Epub 2006 Oct 11.

PMID:
17033785
37.

Does the efficacy of supplemental oxygen for the prevention of postoperative nausea and vomiting depend on the measured outcome, observational period or site of surgery?

Turan A, Apfel CC, Kumpch M, Danzeisen O, Eberhart LH, Forst H, Heringhaus C, Isselhorst C, Trenkler S, Trick M, Vedder I, Kerger H.

Anaesthesia. 2006 Jul;61(7):628-33.

38.

Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy.

Town CD, Cheung F, Maiti R, Crabtree J, Haas BJ, Wortman JR, Hine EE, Althoff R, Arbogast TS, Tallon LJ, Vigouroux M, Trick M, Bancroft I.

Plant Cell. 2006 Jun;18(6):1348-59. Epub 2006 Apr 21.

39.

Intraoperative metamizol as cause for acute anaphylactic collapse.

Eckle T, Ghanayim N, Trick M, Unertl K, Eltzschig HK.

Eur J Anaesthesiol. 2005 Oct;22(10):810-12. No abstract available.

PMID:
16211791
40.

Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana.

Parkin IA, Gulden SM, Sharpe AG, Lukens L, Trick M, Osborn TC, Lydiate DJ.

Genetics. 2005 Oct;171(2):765-81. Epub 2005 Jul 14.

41.

Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species.

Lowe AJ, Moule C, Trick M, Edwards KJ.

Theor Appl Genet. 2004 Apr;108(6):1103-12. Epub 2003 Dec 5.

PMID:
15067397
42.

[Calibration of a room air gas monitor with certified reference gases].

Krueger WA, Trick M, Schroeder TH, Unertl KE.

Anaesthesist. 2003 Dec;52(12):1139-42. German.

PMID:
14691626
43.

The development of multiplex simple sequence repeat (SSR) markers to complement distinctness, uniformity and stability testing of rape (Brassica napus L.) varieties.

Tommasini L, Batley J, Arnold GM, Cooke RJ, Donini P, Lee D, Law JR, Lowe C, Moule C, Trick M, Edwards KJ.

Theor Appl Genet. 2003 Apr;106(6):1091-101. Epub 2002 Oct 22.

PMID:
12671758
44.

CATMA: a complete Arabidopsis GST database.

Crowe ML, Serizet C, Thareau V, Aubourg S, Rouzé P, Hilson P, Beynon J, Weisbeek P, van Hummelen P, Reymond P, Paz-Ares J, Nietfeld W, Trick M.

Nucleic Acids Res. 2003 Jan 1;31(1):156-8.

45.

BACFinder: genomic localisation of large insert genomic clones based on restriction fingerprinting.

Crowe ML, Rana D, Fraser F, Bancroft I, Trick M.

Nucleic Acids Res. 2002 Nov 1;30(21):e118.

46.
47.

GARNet, the Genomic Arabidopsis Resource Network.

Beale M, Dupree P, Lilley K, Beynon J, Trick M, Clarke J, Bevan M, Bancroft I, Jones J, May S, van de Sande K, Leyser O.

Trends Plant Sci. 2002 Apr;7(4):145-7.

PMID:
11950604
48.

UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics.

Dicks J, Anderson M, Cardle L, Cartinhour S, Couchman M, Davenport G, Dickson J, Gale M, Marshall D, May S, McWilliam H, O'Malia A, Ougham H, Trick M, Walsh S, Waugh R.

Nucleic Acids Res. 2000 Jan 1;28(1):104-7.

49.

Pollen-stigma adhesion in Brassica spp involves SLG and SLR1 glycoproteins.

Luu DT, Marty-Mazars D, Trick M, Dumas C, Heizmann P.

Plant Cell. 1999 Feb;11(2):251-62.

50.

Visualization of the Brassica self-incompatibility S-locus on identified oilseed rape chromosomes.

Kamisugi Y, Nakayama S, O'Neil CM, Mathias RJ, Trick M, Fukui K.

Plant Mol Biol. 1998 Dec;38(6):1081-7.

PMID:
9869414

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