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The Generation of a Comprehensive Spectral Library for the Analysis of the Guinea Pig Proteome by SWATH-MS.

Palmowski P, Watson R, Europe-Finner GN, Karolczak-Bayatti M, Porter A, Treumann A, Taggart MJ.

Proteomics. 2019 Aug;19(15):e1900156. doi: 10.1002/pmic.201900156. Epub 2019 Jul 22.


Disrupted alternative splicing for genes implicated in splicing and ciliogenesis causes PRPF31 retinitis pigmentosa.

Buskin A, Zhu L, Chichagova V, Basu B, Mozaffari-Jovin S, Dolan D, Droop A, Collin J, Bronstein R, Mehrotra S, Farkas M, Hilgen G, White K, Pan KT, Treumann A, Hallam D, Bialas K, Chung G, Mellough C, Ding Y, Krasnogor N, Przyborski S, Zwolinski S, Al-Aama J, Alharthi S, Xu Y, Wheway G, Szymanska K, McKibbin M, Inglehearn CF, Elliott DJ, Lindsay S, Ali RR, Steel DH, Armstrong L, Sernagor E, Urlaub H, Pierce E, Lührmann R, Grellscheid SN, Johnson CA, Lako M.

Nat Commun. 2018 Oct 12;9(1):4234. doi: 10.1038/s41467-018-06448-y.


Author Correction: The identification of carbon dioxide mediated protein post-translational modifications.

Linthwaite VL, Janus JM, Brown AP, Wong-Pascua D, O'Donoghue AC, Porter A, Treumann A, Hodgson DRW, Cann MJ.

Nat Commun. 2018 Oct 3;9(1):4131. doi: 10.1038/s41467-018-06711-2.


TOP2B: The First Thirty Years.

Austin CA, Lee KC, Swan RL, Khazeem MM, Manville CM, Cridland P, Treumann A, Porter A, Morris NJ, Cowell IG.

Int J Mol Sci. 2018 Sep 14;19(9). pii: E2765. doi: 10.3390/ijms19092765. Review.


The identification of carbon dioxide mediated protein post-translational modifications.

Linthwaite VL, Janus JM, Brown AP, Wong-Pascua D, O'Donoghue AC, Porter A, Treumann A, Hodgson DRW, Cann MJ.

Nat Commun. 2018 Aug 6;9(1):3092. doi: 10.1038/s41467-018-05475-z. Erratum in: Nat Commun. 2018 Oct 3;9(1):4131.


Human-Induced Pluripotent Stem Cells Generate Light Responsive Retinal Organoids with Variable and Nutrient-Dependent Efficiency.

Hallam D, Hilgen G, Dorgau B, Zhu L, Yu M, Bojic S, Hewitt P, Schmitt M, Uteng M, Kustermann S, Steel D, Nicholds M, Thomas R, Treumann A, Porter A, Sernagor E, Armstrong L, Lako M.

Stem Cells. 2018 Oct;36(10):1535-1551. doi: 10.1002/stem.2883. Epub 2018 Aug 13.


Corrigendum: Physiological and Proteomic Analysis of the Rice Mutant cpm2 Suggests a Negative Regulatory Role of Jasmonic Acid in Drought Tolerance.

Dhakarey R, Raorane ML, Treumann A, Peethambaran PK, Schendel RR, Sahi VP, Hause B, Bunzel M, Henry A, Kohli A, Riemann M.

Front Plant Sci. 2018 Apr 10;9:465. doi: 10.3389/fpls.2018.00465. eCollection 2018.


Genetic variants in PPARGC1B and CNTN4 are associated with thromboxane A2 formation and with cardiovascular event free survival in the Anglo-Scandinavian Cardiac Outcomes Trial (ASCOT).

McCarthy NS, Vangjeli C, Surendran P, Treumann A, Rooney C, Ho E, Sever P, Thom S, Hughes AD, Munroe PB, Howard P, Johnson T, Caulfield M, Shields DC, O'Brien E, Fitzgerald DJ, Stanton AV.

Atherosclerosis. 2018 Feb;269:42-49. doi: 10.1016/j.atherosclerosis.2017.12.013. Epub 2017 Dec 8.


Physiological and Proteomic Analysis of the Rice Mutant cpm2 Suggests a Negative Regulatory Role of Jasmonic Acid in Drought Tolerance.

Dhakarey R, Raorane ML, Treumann A, Peethambaran PK, Schendel RR, Sahi VP, Hause B, Bunzel M, Henry A, Kohli A, Riemann M.

Front Plant Sci. 2017 Nov 10;8:1903. doi: 10.3389/fpls.2017.01903. eCollection 2017. Erratum in: Front Plant Sci. 2018 Apr 10;9:465.


Depletion of Myofibril-Associated Proteins Using Selective Protein Extraction as a Tool in Cardiac Proteomics.

Treumann A, Palmowski P, Tong WC, Taggart J, Morrice N, Nicholas Europe-Finner G, Taggart MJ.

Methods Mol Biol. 2018;1788:1-9. doi: 10.1007/7651_2017_73.


Bypass of Activation Loop Phosphorylation by Aspartate 836 in Activation of the Endoribonuclease Activity of Ire1.

Armstrong MC, Šestak S, Ali AA, Sagini HAM, Brown M, Baty K, Treumann A, Schröder M.

Mol Cell Biol. 2017 Jul 28;37(16). pii: e00655-16. doi: 10.1128/MCB.00655-16. Print 2017 Aug 15.


Identification of a novel K311 ubiquitination site critical for androgen receptor transcriptional activity.

McClurg UL, Cork DMW, Darby S, Ryan-Munden CA, Nakjang S, Mendes Côrtes L, Treumann A, Gaughan L, Robson CN.

Nucleic Acids Res. 2017 Feb 28;45(4):1793-1804. doi: 10.1093/nar/gkw1162.


Data from molecular dynamics simulations in support of the role of human CES1 in the hydrolysis of Amplex Red.

Vistoli G, Treumann A, Zglinicki Tv, Miwa S.

Data Brief. 2016 Jan 28;6:865-70. doi: 10.1016/j.dib.2016.01.031. eCollection 2016 Mar.


Carboxylesterase converts Amplex red to resorufin: Implications for mitochondrial H2O2 release assays.

Miwa S, Treumann A, Bell A, Vistoli G, Nelson G, Hay S, von Zglinicki T.

Free Radic Biol Med. 2016 Jan;90:173-83. doi: 10.1016/j.freeradbiomed.2015.11.011. Epub 2015 Nov 11.


Metabolomic and proteomic analysis of serum from preterm infants with necrotising entercolitis and late-onset sepsis.

Stewart CJ, Nelson A, Treumann A, Skeath T, Cummings SP, Embleton ND, Berrington JE.

Pediatr Res. 2016 Mar;79(3):425-31. doi: 10.1038/pr.2015.235. Epub 2015 Nov 16.


Low abundance of the matrix arm of complex I in mitochondria predicts longevity in mice.

Miwa S, Jow H, Baty K, Johnson A, Czapiewski R, Saretzki G, Treumann A, von Zglinicki T.

Nat Commun. 2014 May 12;5:3837. doi: 10.1038/ncomms4837.


Growth factor receptor/steroid receptor cross talk in trastuzumab-treated breast cancer.

Collins DC, Cocchiglia S, Tibbitts P, Solon G, Bane FT, McBryan J, Treumann A, Eustace A, Hennessy B, Hill AD, Young LS.

Oncogene. 2015 Jan 22;34(4):525-30. doi: 10.1038/onc.2013.586. Epub 2014 Jan 27.


Lysine deacetylase inhibition promotes relaxation of arterial tone and C-terminal acetylation of HSPB6 (Hsp20) in vascular smooth muscle cells.

Chen A, Karolczak-Bayatti M, Sweeney M, Treumann A, Morrissey K, Ulrich SM, Europe-Finner GN, Taggart MJ.

Physiol Rep. 2013 Nov;1(6):e00127. doi: 10.1002/phy2.127. Epub 2013 Nov 7.


Mechanisms of platelet-stimulated colon cancer invasion: role of clusterin and thrombospondin 1 in regulation of the P38MAPK-MMP-9 pathway.

Radziwon-Balicka A, Santos-Martinez MJ, Corbalan JJ, O'Sullivan S, Treumann A, Gilmer JF, Radomski MW, Medina C.

Carcinogenesis. 2014 Feb;35(2):324-32. doi: 10.1093/carcin/bgt332. Epub 2013 Oct 1.


High resolution quantitative proteomics of HeLa cells protein species using stable isotope labeling with amino acids in cell culture(SILAC), two-dimensional gel electrophoresis(2DE) and nano-liquid chromatograpohy coupled to an LTQ-OrbitrapMass spectrometer.

Thiede B, Koehler CJ, Strozynski M, Treumann A, Stein R, Zimny-Arndt U, Schmid M, Jungblut PR.

Mol Cell Proteomics. 2013 Feb;12(2):529-38. doi: 10.1074/mcp.M112.019372. Epub 2012 Oct 1. Erratum in: Mol Cell Proteomics. 2014 Jul;13(7):1900.


Proteomic analysis of 14-3-3 zeta binding proteins in the mouse hippocampus.

Heverin M, Brennan GP, Koehler CJ, Treumann A, Henshall DC.

Int J Physiol Pathophysiol Pharmacol. 2012;4(2):74-83. Epub 2012 Jun 23.


A rapid approach for isobaric peptide termini labeling.

Koehler CJ, Arntzen MO, Treumann A, Thiede B.

Methods Mol Biol. 2012;893:129-41. doi: 10.1007/978-1-61779-885-6_10.


Platelets increase survival of adenocarcinoma cells challenged with anticancer drugs: mechanisms and implications for chemoresistance.

Radziwon-Balicka A, Medina C, O'Driscoll L, Treumann A, Bazou D, Inkielewicz-Stepniak I, Radomski A, Jow H, Radomski MW.

Br J Pharmacol. 2012 Oct;167(4):787-804. doi: 10.1111/j.1476-5381.2012.01991.x.


Comparison of data analysis parameters and MS/MS fragmentation techniques for quantitative proteome analysis using isobaric peptide termini labeling (IPTL).

Koehler CJ, Arntzen MØ, Treumann A, Thiede B.

Anal Bioanal Chem. 2012 Sep;404(4):1103-14. doi: 10.1007/s00216-012-5949-z. Epub 2012 Mar 31.


The effect of diabetes and poor left ventricular function on bone marrow cell-induced myocardial protection.

Lai VK, Linares-Palomino J, Treumann A, Saeed M, Nadal-Ginard B, Galiñanes M.

J Surg Res. 2012 May 1;174(1):e1-e10. doi: 10.1016/j.jss.2011.09.050. Epub 2011 Oct 18.


Acetylation of heat shock protein 20 (Hsp20) regulates human myometrial activity.

Karolczak-Bayatti M, Sweeney M, Cheng J, Edey L, Robson SC, Ulrich SM, Treumann A, Taggart MJ, Europe-Finner GN.

J Biol Chem. 2011 Sep 30;286(39):34346-55. doi: 10.1074/jbc.M111.278549. Epub 2011 Jul 29.


RuvBl2 cooperates with Ets2 to transcriptionally regulate hTERT in colon cancer.

Flavin P, Redmond A, McBryan J, Cocchiglia S, Tibbitts P, Fahy-Browne P, Kay E, Treumann A, Perrem K, McIlroy M, Hill AD, Young LS.

FEBS Lett. 2011 Aug 4;585(15):2537-44. doi: 10.1016/j.febslet.2011.07.005. Epub 2011 Jul 13.


Perturbations of amino acid metabolism associated with glyphosate-dependent inhibition of shikimic acid metabolism affect cellular redox homeostasis and alter the abundance of proteins involved in photosynthesis and photorespiration.

Vivancos PD, Driscoll SP, Bulman CA, Ying L, Emami K, Treumann A, Mauve C, Noctor G, Foyer CH.

Plant Physiol. 2011 Sep;157(1):256-68. doi: 10.1104/pp.111.181024. Epub 2011 Jul 14.


High-resolution separations of protein isoforms with liquid chromatography time-of-flight mass spectrometry using polymer monolithic capillary columns.

Eeltink S, Wouters B, Desmet G, Ursem M, Blinco D, Kemp GD, Treumann A.

J Chromatogr A. 2011 Aug 12;1218(32):5504-11. doi: 10.1016/j.chroma.2011.06.049. Epub 2011 Jun 21.


The role of thromboxane A(2) in the pathogenesis of intrauterine growth restriction associated with maternal smoking in pregnancy.

Lynch CM, O'Kelly R, Stuart B, Treumann A, Conroy R, Regan CL.

Prostaglandins Other Lipid Mediat. 2011 Aug;95(1-4):63-7. doi: 10.1016/j.prostaglandins.2011.06.007. Epub 2011 Jun 23.


Quantitative proteome analysis using isobaric peptide termini labeling (IPTL).

Arntzen MO, Koehler CJ, Treumann A, Thiede B.

Methods Mol Biol. 2011;753:65-76. doi: 10.1007/978-1-61779-148-2_5.


Isobaric peptide termini labeling utilizing site-specific N-terminal succinylation.

Koehler CJ, Arntzen MØ, Strozynski M, Treumann A, Thiede B.

Anal Chem. 2011 Jun 15;83(12):4775-81. doi: 10.1021/ac200229w. Epub 2011 May 16.


IsobariQ: software for isobaric quantitative proteomics using IPTL, iTRAQ, and TMT.

Arntzen MØ, Koehler CJ, Barsnes H, Berven FS, Treumann A, Thiede B.

J Proteome Res. 2011 Feb 4;10(2):913-20. doi: 10.1021/pr1009977. Epub 2010 Nov 29.


Acclimation to high CO2 in maize is related to water status and dependent on leaf rank.

Prins A, Mukubi JM, Pellny TK, Verrier PJ, Beyene G, Lopes MS, Emami K, Treumann A, Lelarge-Trouverie C, Noctor G, Kunert KJ, Kerchev P, Foyer CH.

Plant Cell Environ. 2011 Feb;34(2):314-31. doi: 10.1111/j.1365-3040.2010.02245.x. Epub 2010 Dec 15.


Isobaric protein and peptide quantification: perspectives and issues.

Treumann A, Thiede B.

Expert Rev Proteomics. 2010 Oct;7(5):647-53. doi: 10.1586/epr.10.29. Review.


Regulation of the androgen receptor by SET9-mediated methylation.

Gaughan L, Stockley J, Wang N, McCracken SR, Treumann A, Armstrong K, Shaheen F, Watt K, McEwan IJ, Wang C, Pestell RG, Robson CN.

Nucleic Acids Res. 2011 Mar;39(4):1266-79. doi: 10.1093/nar/gkq861. Epub 2010 Oct 19. Erratum in: Nucleic Acids Res. 2013 Jul;41(13):6783.


Protein interactions with the platelet integrin alpha(IIb) regulatory motif.

Raab M, Daxecker H, Edwards RJ, Treumann A, Murphy D, Moran N.

Proteomics. 2010 Aug;10(15):2790-800. doi: 10.1002/pmic.200900621.


Differential binding of ICln in platelets to integrin-derived activating and inhibitory peptides.

Raab M, Parthasarathi L, Treumann A, Moran N, Daxecker H.

Biochem Biophys Res Commun. 2010 Feb 12;392(3):258-63. doi: 10.1016/j.bbrc.2009.12.088. Epub 2009 Dec 23.


Isobaric peptide termini labeling for MS/MS-based quantitative proteomics.

Koehler CJ, Strozynski M, Kozielski F, Treumann A, Thiede B.

J Proteome Res. 2009 Sep;8(9):4333-41. doi: 10.1021/pr900425n.


The glycosylphosphatidylinositol-PLC in Trypanosoma brucei forms a linear array on the exterior of the flagellar membrane before and after activation.

Hanrahan O, Webb H, O'Byrne R, Brabazon E, Treumann A, Sunter JD, Carrington M, Voorheis HP.

PLoS Pathog. 2009 Jun;5(6):e1000468. doi: 10.1371/journal.ppat.1000468. Epub 2009 Jun 5.


Neoplasms escape selective COX-2 inhibition in an animal model of breast cancer.

Barry M, Cahill RA, Roche-Nagle G, Neilan TG, Treumann A, Harmey JH, Bouchier-Hayes DJ.

Ir J Med Sci. 2009 Jun;178(2):201-8. doi: 10.1007/s11845-009-0335-3. Epub 2009 Apr 2.


Compartmentalization regulates the interaction between the platelet integrin alpha IIb beta 3 and ICln.

Larkin D, Treumann A, Murphy D, DeChaumont C, Kiernan A, Moran N.

Br J Haematol. 2009 Feb;144(4):580-90. doi: 10.1111/j.1365-2141.2008.07483.x. Epub 2008 Nov 13.


RN181, a novel ubiquitin E3 ligase that interacts with the KVGFFKR motif of platelet integrin alpha(IIb)beta3.

Brophy TM, Raab M, Daxecker H, Culligan KG, Lehmann I, Chubb AJ, Treumann A, Moran N.

Biochem Biophys Res Commun. 2008 May 16;369(4):1088-93. doi: 10.1016/j.bbrc.2008.02.142. Epub 2008 Mar 10.


A peptide affinity column for the identification of integrin alpha IIb-binding proteins.

Daxecker H, Raab M, Bernard E, Devocelle M, Treumann A, Moran N.

Anal Biochem. 2008 Mar 1;374(1):203-12. Epub 2007 Dec 4.


Renin gene polymorphisms and haplotypes, blood pressure, and responses to renin-angiotensin system inhibition.

Moore N, Dicker P, O'Brien JK, Stojanovic M, Conroy RM, Treumann A, O'Brien ET, Fitzgerald D, Shields D, Stanton AV.

Hypertension. 2007 Aug;50(2):340-7. Epub 2007 Jun 11.


An improved strategy for selective and efficient enrichment of integral plasma membrane proteins of mycobacteria.

Mattow J, Siejak F, Hagens K, Schmidt F, Koehler C, Treumann A, Schaible UE, Kaufmann SH.

Proteomics. 2007 May;7(10):1687-701.


Correlation of probiotic Lactobacillus salivarius growth phase with its cell wall-associated proteome.

Kelly P, Maguire PB, Bennett M, Fitzgerald DJ, Edwards RJ, Thiede B, Treumann A, Collins JK, O'Sullivan GC, Shanahan F, Dunne C.

FEMS Microbiol Lett. 2005 Nov 1;252(1):153-9. Epub 2005 Sep 19.


Shotgun proteome analysis of protein cleavage in apoptotic cells.

Thiede B, Treumann A, Kretschmer A, Söhlke J, Rudel T.

Proteomics. 2005 May;5(8):2123-30.


Identification of the 5-methylthiopentosyl substituent in Mycobacterium tuberculosis lipoarabinomannan.

Turnbull WB, Shimizu KH, Chatterjee D, Homans SW, Treumann A.

Angew Chem Int Ed Engl. 2004 Jul 26;43(30):3918-22. No abstract available.


Truncated structural variants of lipoarabinomannan in Mycobacterium leprae and an ethambutol-resistant strain of Mycobacterium tuberculosis.

Torrelles JB, Khoo KH, Sieling PA, Modlin RL, Zhang N, Marques AM, Treumann A, Rithner CD, Brennan PJ, Chatterjee D.

J Biol Chem. 2004 Sep 24;279(39):41227-39. Epub 2004 Jul 19.

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