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User-controlled pipelines for feature integration and head and neck radiation therapy outcome predictions.

Welch ML, McIntosh C, McNiven A, Huang SH, Zhang BB, Wee L, Traverso A, O'Sullivan B, Hoebers F, Dekker A, Jaffray DA.

Phys Med. 2020 Feb 2;70:145-152. doi: 10.1016/j.ejmp.2020.01.027. [Epub ahead of print]


Sleep-Related Rhythmic Movements and Sleep Terrors: A Possible Common Neurophysiological Background in a Preschool Boy.

Merli E, Ferri R, DelRosso LM, Mignani F, Loddo G, Traverso A, Provini F.

J Clin Sleep Med. 2019 Dec 15;15(12):1849-1852. doi: 10.5664/jcsm.8098. Epub 2019 Nov 2.


External validation and transfer learning of convolutional neural networks for computed tomography dental artifact classification.

Welch ML, McIntosh C, Traverso A, Wee L, Purdie TG, Dekker A, Haibe-Kains B, Jaffray DA.

Phys Med Biol. 2020 Feb 5;65(3):035017. doi: 10.1088/1361-6560/ab63ba.


Automatic classification of dental artifact status for efficient image veracity checks: effects of image resolution and convolutional neural network depth.

Welch ML, McIntosh C, Purdie TG, Wee L, Traverso A, Dekker A, Haibe-Kains B, Jaffray DA.

Phys Med Biol. 2020 Jan 10;65(1):015005. doi: 10.1088/1361-6560/ab5427.


Distributed radiomics as a signature validation study using the Personal Health Train infrastructure.

Shi Z, Zhovannik I, Traverso A, Dankers FJWM, Deist TM, Kalendralis P, Monshouwer R, Bussink J, Fijten R, Aerts HJWL, Dekker A, Wee L.

Sci Data. 2019 Oct 22;6(1):218. doi: 10.1038/s41597-019-0241-0.


Technical Note: Ontology-guided radiomics analysis workflow (O-RAW).

Shi Z, Traverso A, van Soest J, Dekker A, Wee L.

Med Phys. 2019 Dec;46(12):5677-5684. doi: 10.1002/mp.13844. Epub 2019 Oct 25.


Sensitivity of radiomic features to inter-observer variability and image pre-processing in Apparent Diffusion Coefficient (ADC) maps of cervix cancer patients.

Traverso A, Kazmierski M, Welch ML, Weiss J, Fiset S, Foltz WD, Gladwish A, Dekker A, Jaffray D, Wee L, Han K.

Radiother Oncol. 2019 Aug 30. pii: S0167-8140(19)33047-6. doi: 10.1016/j.radonc.2019.08.008. [Epub ahead of print]


Learning from scanners: Bias reduction and feature correction in radiomics.

Zhovannik I, Bussink J, Traverso A, Shi Z, Kalendralis P, Wee L, Dekker A, Fijten R, Monshouwer R.

Clin Transl Radiat Oncol. 2019 Jul 16;19:33-38. doi: 10.1016/j.ctro.2019.07.003. eCollection 2019 Nov.


Emozioni, comportamenti e relazioni: uno studio caso-controllo sul self-cutting in adolescenza.

Gatta M, Spoto A, Miscioscia M, Valentini P, Donadel ME, Del Col L, Zanato S, Traverso A, Ferruzza E.

Riv Psichiatr. 2019 Jul-Aug;54(4):175-182. doi: 10.1708/3202.31800.


Prediction Modeling Methodology.

Dankers FJWM, Traverso A, Wee L, van Kuijk SMJ.

In: Kubben P, Dumontier M, Dekker A, editors. Fundamentals of Clinical Data Science [Internet]. Cham (CH): Springer; 2019. Chapter 8.
2018 Dec 22.


Reporting Standards and Critical Appraisal of Prediction Models.

Wee L, van Kuijk SMJ, Dankers FJWM, Traverso A, Welch M, Dekker A.

In: Kubben P, Dumontier M, Dekker A, editors. Fundamentals of Clinical Data Science [Internet]. Cham (CH): Springer; 2019. Chapter 10.
2018 Dec 22.


Data at Scale.

Traverso A, Dankers FJWM, Wee L, van Kuijk SMJ.

In: Kubben P, Dumontier M, Dekker A, editors. Fundamentals of Clinical Data Science [Internet]. Cham (CH): Springer; 2019. Chapter 2.
2018 Dec 22.


Preparing Data for Predictive Modelling.

van Kuijk SMJ, Dankers FJWM, Traverso A, Wee L.

In: Kubben P, Dumontier M, Dekker A, editors. Fundamentals of Clinical Data Science [Internet]. Cham (CH): Springer; 2019. Chapter 6.
2018 Dec 22.


Diving Deeper into Models.

Traverso A, Dankers FJWM, Osong B, Wee L, van Kuijk SMJ.

In: Kubben P, Dumontier M, Dekker A, editors. Fundamentals of Clinical Data Science [Internet]. Cham (CH): Springer; 2019. Chapter 9.
2018 Dec 22.


Stability of radiomic features of apparent diffusion coefficient (ADC) maps for locally advanced rectal cancer in response to image pre-processing.

Traverso A, Kazmierski M, Shi Z, Kalendralis P, Welch M, Nissen HD, Jaffray D, Dekker A, Wee L.

Phys Med. 2019 May;61:44-51. doi: 10.1016/j.ejmp.2019.04.009. Epub 2019 Apr 28.


Repeatability and reproducibility of MRI-based radiomic features in cervical cancer.

Fiset S, Welch ML, Weiss J, Pintilie M, Conway JL, Milosevic M, Fyles A, Traverso A, Jaffray D, Metser U, Xie J, Han K.

Radiother Oncol. 2019 Jun;135:107-114. doi: 10.1016/j.radonc.2019.03.001. Epub 2019 Mar 19.


Shear Wave Elastography in the Diagnosis of Hand Tumours.

Schivo D, Gjika E, Traverso A, Durand S.

Case Rep Orthop. 2019 Feb 24;2019:2736529. doi: 10.1155/2019/2736529. eCollection 2019.


Multicenter CT phantoms public dataset for radiomics reproducibility tests.

Kalendralis P, Traverso A, Shi Z, Zhovannik I, Monshouwer R, Starmans MPA, Klein S, Pfaehler E, Boellaard R, Dekker A, Wee L.

Med Phys. 2019 Mar;46(3):1512-1518. doi: 10.1002/mp.13385. Epub 2019 Jan 29.


Repeatability and Reproducibility of Radiomic Features: A Systematic Review.

Traverso A, Wee L, Dekker A, Gillies R.

Int J Radiat Oncol Biol Phys. 2018 Nov 15;102(4):1143-1158. doi: 10.1016/j.ijrobp.2018.05.053. Epub 2018 Jun 5.


The radiation oncology ontology (ROO): Publishing linked data in radiation oncology using semantic web and ontology techniques.

Traverso A, van Soest J, Wee L, Dekker A.

Med Phys. 2018 Oct;45(10):e854-e862. doi: 10.1002/mp.12879. Epub 2018 Aug 24.


A cloud-based computer-aided detection system improves identification of lung nodules on computed tomography scans of patients with extra-thoracic malignancies.

Vassallo L, Traverso A, Agnello M, Bracco C, Campanella D, Chiara G, Fantacci ME, Lopez Torres E, Manca A, Saletta M, Giannini V, Mazzetti S, Stasi M, Cerello P, Regge D.

Eur Radiol. 2019 Jan;29(1):144-152. doi: 10.1007/s00330-018-5528-6. Epub 2018 Jun 15.


Two-Photon Infrared Resonance Can Enhance Coherent Raman Scattering.

Traverso AJ, Hokr B, Yi Z, Yuan L, Yamaguchi S, Scully MO, Yakovlev VV.

Phys Rev Lett. 2018 Feb 9;120(6):063602. doi: 10.1103/PhysRevLett.120.063602.


Assessing performance of modern Brillouin spectrometers.

Coker Z, Troyanova-Wood M, Traverso AJ, Yakupov T, Utegulov ZN, Yakovlev VV.

Opt Express. 2018 Feb 5;26(3):2400-2409. doi: 10.1364/OE.26.002400.


Revealing the glass transition in shape memory polymers using Brillouin spectroscopy.

Steelman ZA, Weems AC, Traverso AJ, Szafron JM, Maitland DJ, Yakovlev VV.

Appl Phys Lett. 2017 Dec 11;111(24):241904. doi: 10.1063/1.4999803. Epub 2017 Dec 13.


Multicomponent, fragment-based synthesis of polyphenol-containing peptidomimetics and their inhibiting activity on beta-amyloid oligomerization.

Lambruschini C, Galante D, Moni L, Ferraro F, Gancia G, Riva R, Traverso A, Banfi L, D'Arrigo C.

Org Biomol Chem. 2017 Nov 15;15(44):9331-9351. doi: 10.1039/c7ob02182h.


Quality of Life and Psychopathology in Adults Who Underwent Hematopoietic Stem Cell Transplantation (HSCT) in Childhood: A Qualitative and Quantitative Analysis.

Sinatora F, Traverso A, Zanato S, Di Florio N, Porreca A, Tremolada M, Boscolo V, Marzollo A, Mainardi C, Calore E, Pillon M, Cattelan C, Basso G, Messina C.

Front Psychol. 2017 Aug 8;8:1316. doi: 10.3389/fpsyg.2017.01316. eCollection 2017.


Validation, comparison, and combination of algorithms for automatic detection of pulmonary nodules in computed tomography images: The LUNA16 challenge.

Setio AAA, Traverso A, de Bel T, Berens MSN, Bogaard CVD, Cerello P, Chen H, Dou Q, Fantacci ME, Geurts B, Gugten RV, Heng PA, Jansen B, de Kaste MMJ, Kotov V, Lin JY, Manders JTMC, Sóñora-Mengana A, García-Naranjo JC, Papavasileiou E, Prokop M, Saletta M, Schaefer-Prokop CM, Scholten ET, Scholten L, Snoeren MM, Torres EL, Vandemeulebroucke J, Walasek N, Zuidhof GCA, Ginneken BV, Jacobs C.

Med Image Anal. 2017 Dec;42:1-13. doi: 10.1016/ Epub 2017 Jul 13.


Directional coherent light via intensity-induced sideband emission.

Traverso AJ, O'Brien C, Hokr BH, Thompson JV, Yuan L, Ballmann CW, Svidzinsky AA, Petrov GI, Scully MO, Yakovlev VV.

Light Sci Appl. 2017 May 19;6(5):e16262. doi: 10.1038/lsa.2016.262. eCollection 2017 May.


Psychopathological Aspects in Childhood Hematopoietic Stem Cell Transplantation (HSCT): The Perception of Parents and Adolescents.

Zanato S, Traverso A, Tremolada M, Sinatora F, Porreca A, Pozziani G, Di Florio N, Capello F, Marzollo A, Tumino M, Cattelan C, Basso G, Messina C.

Front Psychol. 2017 Apr 5;8:272. doi: 10.3389/fpsyg.2017.00272. eCollection 2017.


Amplitude concentration in a phase-modulated spectrum due to femtosecond filamentation.

Thompson JV, Zhokhov PA, Springer MM, Traverso AJ, Yakovlev VV, Zheltikov AM, Sokolov AV, Scully MO.

Sci Rep. 2017 Mar 7;7:43367. doi: 10.1038/srep43367.


Stimulated Brillouin Scattering Microscopic Imaging.

Ballmann CW, Thompson JV, Traverso AJ, Meng Z, Scully MO, Yakovlev VV.

Sci Rep. 2015 Dec 22;5:18139. doi: 10.1038/srep18139.


Intraparenchymal ventricular diverticula in chronic obstructive hydrocephalus: prevalence, imaging features and evolution.

Manara R, Citton V, Traverso A, Zanotti MC, Faggin R, Sartori S, Perini R, Milanese L, Briani C, Bona F, Rolma G, Rossetto M, Zerbo F, Di Salle F, d'Avella D.

Acta Neurochir (Wien). 2015 Oct;157(10):1721-30. doi: 10.1007/s00701-015-2540-3. Epub 2015 Aug 23.


Dual Raman-Brillouin Microscope for Chemical and Mechanical Characterization and Imaging.

Traverso AJ, Thompson JV, Steelman ZA, Meng Z, Scully MO, Yakovlev VV.

Anal Chem. 2015 Aug 4;87(15):7519-23. doi: 10.1021/acs.analchem.5b02104. Epub 2015 Jul 24.


Pediatric epilepsy following neonatal seizures symptomatic of stroke.

Suppiej A, Mastrangelo M, Mastella L, Accorsi P, Grazian L, Casara G, Peruzzi C, Carpanelli ML, Janes A, Traverso A, Dalla Bernardina B.

Brain Dev. 2016 Jan;38(1):27-31. doi: 10.1016/j.braindev.2015.05.010. Epub 2015 Jun 6.


Brillouin spectroscopy as a new method of screening for increased CSF total protein during bacterial meningitis.

Steelman Z, Meng Z, Traverso AJ, Yakovlev VV.

J Biophotonics. 2015 May;8(5):408-14. doi: 10.1002/jbio.201400047. Epub 2014 Jul 15.


Background clean-up in Brillouin microspectroscopy of scattering medium.

Meng Z, Traverso AJ, Yakovlev VV.

Opt Express. 2014 Mar 10;22(5):5410-5. doi: 10.1364/OE.22.005410.


Femtosecond-laser-induced shockwaves in water generated at an air-water interface.

Strycker BD, Springer MM, Traverso AJ, Kolomenskii AA, Kattawar GW, Sokolov AV.

Opt Express. 2013 Oct 7;21(20):23772-84. doi: 10.1364/OE.21.023772.


Durability of the response to peginterferon-α2b and ribavirin in patients with chronic hepatitis C: a cohort study in the routine clinical setting.

Giordanino C, Sacco M, Ceretto S, Smedile A, Ciancio A, Cariti G, De Blasi T, Picciotto A, Marenco S, Grasso A, Pirisi M, Smirne C, Colletta C, Traverso A, Mazzucco D, Ciccone G, Simondi D, Rizzetto M, Saracco G.

Eur J Gastroenterol Hepatol. 2014 Jan;26(1):52-8. doi: 10.1097/MEG.0b013e328362dc99.


PET in the clinical work-up of patients with spondylodiscitis: a new tool for the clinician?

Skanjeti A, Penna D, Douroukas A, Cistaro A, Arena V, Leo G, Longo G, Traverso A, Belloro S, Pelosi E.

Q J Nucl Med Mol Imaging. 2012 Dec;56(6):569-76.


Coherence brightened laser source for atmospheric remote sensing.

Traverso AJ, Sanchez-Gonzalez R, Yuan L, Wang K, Voronine DV, Zheltikov AM, Rostovtsev Y, Sautenkov VA, Sokolov AV, North SW, Scully MO.

Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):15185-90. Epub 2012 Sep 4.


The role of visual electrophysiology in mucopolysaccharidoses.

Suppiej A, Rampazzo A, Cappellari A, Traverso A, Tormene AP, Pinello L, Scarpa M.

J Child Neurol. 2013 Oct;28(10):1203-9. doi: 10.1177/0883073812453322. Epub 2012 Aug 21.


Possible clinical failure of artemether-lumefantrine in an italian traveler with uncomplicated falciparum malaria.

Repetto EC, Traverso A, Giacomazzi CG.

Mediterr J Hematol Infect Dis. 2011;3(1):e2011041. doi: 10.4084/MJHID.2011.041. Epub 2011 Oct 1.


A large outbreak of Opisthorchis felineus in Italy suggests that opisthorchiasis develops as a febrile eosinophilic syndrome with cholestasis rather than a hepatitis-like syndrome.

Traverso A, Repetto E, Magnani S, Meloni T, Natrella M, Marchisio P, Giacomazzi C, Bernardi P, Gatti S, Gomez Morales MA, Pozio E.

Eur J Clin Microbiol Infect Dis. 2012 Jun;31(6):1089-93. doi: 10.1007/s10096-011-1411-y. Epub 2011 Sep 22.


IGF-1 abuse in sport: clinical and medico-legal aspects.

Molinelli A, Bonsignore A, Cicconi M, Cioè A, Traverso A.

J Sports Med Phys Fitness. 2010 Dec;50(4):530-5.


Bilateral loss of cortical somatosensory evoked potential at birth predicts cerebral palsy in term and near-term newborns.

Suppiej A, Cappellari A, Franzoi M, Traverso A, Ermani M, Zanardo V.

Early Hum Dev. 2010 Feb;86(2):93-8. doi: 10.1016/j.earlhumdev.2010.01.024. Epub 2010 Feb 21.


Tethered cord in patients with anorectal malformation: preliminary results.

Suppiej A, Dal Zotto L, Cappellari A, Traverso A, Castagnetti M, Drigo P, Midrio P.

Pediatr Surg Int. 2009 Oct;25(10):851-5. doi: 10.1007/s00383-009-2435-6.


[Prevalence of hearing loss in elderly individuals over 65 years of age: a pilot study in Lombardia (Italy)].

Arpesella M, Ambrosetti U, De Martini G, Emanuele L, Lottaroli S, Redaelli T, Sarchi P, Segagni Lusignani L, Traverso A, Cesarani A.

Ig Sanita Pubbl. 2008 Sep-Oct;64(5):611-21. Italian.


Aggregation and inhibition of rat intestinal alkaline phosphatase by high concentrations of calcium. Reversibility of the processes.

Brun LR, Traverso A, Rigalli A.

J Enzyme Inhib Med Chem. 2009 Jun;24(3):691-6. doi: 10.1080/14756360802333182.


A short course of pegylated interferon-alpha in acute HCV hepatitis.

Calleri G, Cariti G, Gaiottino F, De Rosa FG, Bargiacchi O, Audagnotto S, Quaglia S, De Blasi T, Romano P, Traverso A, Leo G, Carbone R, Del Mastro B, Tinelli M, Caramello P, Di Perri G.

J Viral Hepat. 2007 Feb;14(2):116-21.


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