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Items: 22

1.

Resonances in the response of fluidic networks inherent to the cooperation between elasticity and bifurcations.

Yáñez D, Travasso RDM, Corvera Poiré E.

R Soc Open Sci. 2019 Sep 25;6(9):190661. doi: 10.1098/rsos.190661. eCollection 2019 Sep.

2.

Soft culture substrates favor stem-like cellular phenotype and facilitate reprogramming of human mesenchymal stem/stromal cells (hMSCs) through mechanotransduction.

Gerardo H, Lima A, Carvalho J, Ramos JRD, Couceiro S, Travasso RDM, Pires das Neves R, Grãos M.

Sci Rep. 2019 Jun 24;9(1):9086. doi: 10.1038/s41598-019-45352-3.

3.

Localized redox relays as a privileged mode of cytoplasmic hydrogen peroxide signaling.

Travasso RDM, Sampaio Dos Aidos F, Bayani A, Abranches P, Salvador A.

Redox Biol. 2017 Aug;12:233-245. doi: 10.1016/j.redox.2017.01.003. Epub 2017 Jan 6.

4.

Correction: Tumor Angiogenesis and Vascular Patterning: A Mathematical Model.

Travasso RD, Poiré EC, Castro M, Rodrguez-Manzaneque JC, Hernández-Machado A.

PLoS One. 2016 Jan 5;11(1):e0146650. doi: 10.1371/journal.pone.0146650. eCollection 2016. No abstract available.

5.

The Force at the Tip--Modelling Tension and Proliferation in Sprouting Angiogenesis.

Santos-Oliveira P, Correia A, Rodrigues T, Ribeiro-Rodrigues TM, Matafome P, Rodríguez-Manzaneque JC, Seiça R, Girão H, Travasso RD.

PLoS Comput Biol. 2015 Aug 6;11(8):e1004436. doi: 10.1371/journal.pcbi.1004436. eCollection 2015 Aug. Erratum in: PLoS Comput Biol. 2015 Nov;11(11):e1004616.

6.

Obstructions in Vascular Networks: Relation Between Network Morphology and Blood Supply.

Torres Rojas AM, Meza Romero A, Pagonabarraga I, Travasso RD, Corvera Poiré E.

PLoS One. 2015 Jun 18;10(6):e0128111. doi: 10.1371/journal.pone.0128111. eCollection 2015.

7.

Hypoxia in vascular networks: a complex system approach to unravel the diabetic paradox.

Gandica Y, Schwarz T, Oliveira O, Travasso RD.

PLoS One. 2014 Nov 19;9(11):e113165. doi: 10.1371/journal.pone.0113165. eCollection 2014.

8.

Flow and anastomosis in vascular networks.

Flores J, Meza Romero A, Travasso RD, Corvera Poiré E.

J Theor Biol. 2013 Jan 21;317:257-70. doi: 10.1016/j.jtbi.2012.10.005. Epub 2012 Oct 17.

PMID:
23084892
9.

Why do protein folding rates correlate with metrics of native topology?

Faísca PF, Travasso RD, Parisi A, Rey A.

PLoS One. 2012;7(4):e35599. doi: 10.1371/journal.pone.0035599. Epub 2012 Apr 27.

10.

Tumor angiogenesis and vascular patterning: a mathematical model.

Travasso RD, Corvera Poiré E, Castro M, Rodríguez-Manzaneque JC, Hernández-Machado A.

PLoS One. 2011;6(5):e19989. doi: 10.1371/journal.pone.0019989. Epub 2011 May 27. Erratum in: PLoS One. 2011;6(6). doi:10.1371/annotation/53aa27c5-0c32-4904-9278-4a68c39963d2.. Rodrguez-Manzaneque, Juan Carlos [corrected to Rodríguez-Manzaneque, Juan Carlos]. PLoS One. 2016;11(1):e0146650.

11.

The protein folding transition state: insights from kinetics and thermodynamics.

Travasso RD, Faísca PF, Rey A.

J Chem Phys. 2010 Sep 28;133(12):125102. doi: 10.1063/1.3485286.

PMID:
20886966
12.

Non-native interactions play an effective role in protein folding dynamics.

Faísca PF, Nunes A, Travasso RD, Shakhnovich EI.

Protein Sci. 2010 Nov;19(11):2196-209. doi: 10.1002/pro.498.

13.

The folding of knotted proteins: insights from lattice simulations.

Faísca PF, Travasso RD, Charters T, Nunes A, Cieplak M.

Phys Biol. 2010 Feb 3;7(1):16009. doi: 10.1088/1478-3975/7/1/016009.

PMID:
20130340
14.

Identifying critical residues in protein folding: Insights from phi-value and P(fold) analysis.

Faísca PF, Travasso RD, Ball RC, Shakhnovich EI.

J Chem Phys. 2008 Sep 7;129(9):095108. doi: 10.1063/1.2973624.

15.

Pathways to folding, nucleation events, and native geometry.

Travasso RD, Telo da Gama MM, Faísca PF.

J Chem Phys. 2007 Oct 14;127(14):145106.

PMID:
17935450
16.

Dynamics of ternary mixtures with photosensitive chemical reactions: creating three-dimensionally ordered blends.

Kuksenok O, Travasso RD, Balazs AC.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Jul;74(1 Pt 1):011502. Epub 2006 Jul 11.

PMID:
16907095
17.

Exploiting photoinduced reactions in polymer blends to create hierarchically ordered, defect-free materials.

Travasso RD, Kuksenok O, Balazs AC.

Langmuir. 2006 Mar 14;22(6):2620-8.

PMID:
16519462
18.

Harnessing light to create defect-free, hierarchically structured polymeric materials.

Travasso RD, Kuksenok O, Balazs AC.

Langmuir. 2005 Nov 22;21(24):10912-5.

PMID:
16285752
19.

Modeling the morphology and mechanical properties of sheared ternary mixtures.

Travasso RD, Buxton GA, Kuksenok O, Good K, Balazs AC.

J Chem Phys. 2005 May 15;122(19):194906.

PMID:
16161616
20.

Interface fluctuations, Burgers equations, and coarsening under shear.

Bray AJ, Cavagna A, Travasso RD.

Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Jan;65(1 Pt 2):016104. Epub 2001 Dec 5.

PMID:
11800733
21.

Interface fluctuations under shear.

Bray AJ, Cavagna A, Travasso RD.

Phys Rev E Stat Nonlin Soft Matter Phys. 2001 Jul;64(1 Pt 1):012102. Epub 2001 Jun 13.

PMID:
11461303
22.

Ohta-jasnow-kawasaki approximation for nonconserved coarsening under shear

Cavagna A, Bray AJ, Travasso RD.

Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 2000 Oct;62(4 Pt A):4702-19.

PMID:
11089010

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