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Items: 1 to 50 of 217

1.

dStruct: identifying differentially reactive regions from RNA structurome profiling data.

Choudhary K, Lai YH, Tran EJ, Aviran S.

Genome Biol. 2019 Feb 21;20(1):40. doi: 10.1186/s13059-019-1641-3.

PMID:
30791935
2.

Neoantigen screening identifies broad TP53 mutant immunogenicity in patients with epithelial cancers.

Malekzadeh P, Pasetto A, Robbins PF, Parkhurst MR, Paria BC, Jia L, Gartner JJ, Hill V, Yu Z, Restifo NP, Sachs A, Tran E, Lo W, Somerville RP, Rosenberg SA, Deniger DC.

J Clin Invest. 2019 Feb 4. pii: 123791. doi: 10.1172/JCI123791. [Epub ahead of print] No abstract available.

3.

Immunologic recognition of a shared p53 mutated neoantigen in a patient with metastatic colorectal cancer.

Lo W, Parkhurst MR, Robbins PF, Tran E, Lu YC, Jia L, Gartner JJ, Pasetto A, Deniger DC, Malekzadeh P, Shelton T, Prickett TD, Ray S, Kivitz S, Paria BC, Kriley IR, Schrump DS, Rosenberg SA.

Cancer Immunol Res. 2019 Feb 1. pii: canimm.0686.2018. doi: 10.1158/2326-6066.CIR-18-0686. [Epub ahead of print]

PMID:
30709841
4.

Postoperative Adverse Events, Interventions, and the Utility of Routine Follow-Up After 23-, 25-, and 27-Gauge Pars Plana Vitrectomy.

Shields RA, Ludwig CA, Powers MA, Tran EMT, Smith SJ, Moshfeghi DM.

Asia Pac J Ophthalmol (Phila). 2019 Jan 10. doi: 10.22608/APO.2018398. [Epub ahead of print]

5.

Profiling grapevine trunk pathogens in planta: a case for community-targeted DNA metabarcoding.

Morales-Cruz A, Figueroa-Balderas R, GarcĂ­a JF, Tran E, Rolshausen PE, Baumgartner K, Cantu D.

BMC Microbiol. 2018 Dec 14;18(1):214. doi: 10.1186/s12866-018-1343-0.

6.

The DDX5/Dbp2 subfamily of DEAD-box RNA helicases.

Xing Z, Ma WK, Tran EJ.

Wiley Interdiscip Rev RNA. 2019 Mar;10(2):e1519. doi: 10.1002/wrna.1519. Epub 2018 Dec 2. Review.

PMID:
30506978
7.

Documentation and incidence of late effects and screening recommendations for adolescent and young adult head and neck cancer survivors treated with radiotherapy.

Hamilton SN, Arshad O, Kwok J, Tran E, Fuchsia Howard A, Serrano I, Goddard K.

Support Care Cancer. 2018 Nov 22. doi: 10.1007/s00520-018-4559-5. [Epub ahead of print]

PMID:
30467794
8.

Neutropenia in glycogen storage disease Ib: outcomes for patients treated with granulocyte colony-stimulating factor.

Dale DC, Bolyard AA, Marrero T, Kelley ML, Makaryan V, Tran E, Leung J, Boxer LA, Kishnani PS, Austin S, Wanner C, Ferrecchia IA, Khalaf D, Maze D, Kurtzberg J, Zeidler C, Welte K, Weinstein DA.

Curr Opin Hematol. 2019 Jan;26(1):16-21. doi: 10.1097/MOH.0000000000000474.

PMID:
30451720
9.

Comorbid cancer and use of thrombolysis in acute pulmonary embolism.

Weeda ER, Hakamiun KM, Leschorn HX, Tran E.

J Thromb Thrombolysis. 2018 Nov 17. doi: 10.1007/s11239-018-1772-5. [Epub ahead of print]

PMID:
30448999
10.

Magnetic Resonance Imaging Volumetry of Primary Nasopharyngeal Cancer in Patients Treated with Induction Gemcitabine and Cisplatin Followed by Concurrent Cisplatin and Volumetric Modulated Arc Therapy.

Giambattista J, McVicar N, Hamilton S, Martin M, Maas B, Ho C, Wu J, Tran E, Hay J, Berthelet E.

Cureus. 2018 Sep 13;10(9):e3296. doi: 10.7759/cureus.3296.

11.

Sclerosing Odontogenic Carcinoma with Local Recurrence: Case Report and Review of Literature.

Todorovic E, Berthelet E, O'Connor R, Durham JS, Tran E, Martin M, Hayes MM, Ng TL.

Head Neck Pathol. 2018 Oct 12. doi: 10.1007/s12105-018-0975-6. [Epub ahead of print]

PMID:
30315432
12.

Early (90-day) mortality after radical radiotherapy for head and neck squamous cell carcinoma: A population-based analysis.

Hamilton SN, Tran E, Berthelet E, Wu J, Olson R.

Head Neck. 2018 Nov;40(11):2432-2440. doi: 10.1002/hed.25352. Epub 2018 Oct 8.

PMID:
30295975
13.

Enhanced detection of neoantigen-reactive T cells targeting unique and shared oncogenes for personalized cancer immunotherapy.

Yossef R, Tran E, Deniger DC, Gros A, Pasetto A, Parkhurst MR, Gartner JJ, Prickett TD, Cafri G, Robbins PF, Rosenberg SA.

JCI Insight. 2018 Oct 4;3(19). pii: 122467. doi: 10.1172/jci.insight.122467. [Epub ahead of print]

14.

The DEAD-box protein Dbp2p is linked to noncoding RNAs, the helicase Sen1p, and R-loops.

Tedeschi FA, Cloutier SC, Tran EJ, Jankowsky E.

RNA. 2018 Dec;24(12):1693-1705. doi: 10.1261/rna.067249.118. Epub 2018 Sep 27.

PMID:
30262458
15.

Sepsis Increases Muscle Proteolysis in Severely Burned Adults, But Does Not Impact Whole-Body Lipid or Carbohydrate Kinetics.

Murton A, Bohanon FJ, Ogunbileje JO, Capek KD, Tran EA, Chao T, Sidossis LS, Porter C, Herndon DN.

Shock. 2018 Sep 19. doi: 10.1097/SHK.0000000000001263. [Epub ahead of print]

PMID:
30239418
16.

Engaging College-Level Baccalaureate-MD Students in Clinical Research.

Tran EM, Ip J, Greenberg PB.

R I Med J (2013). 2018 Sep 4;101(7):35-38.

PMID:
30189702
17.

High-throughput combinatorial screening reveals interactions between signaling molecules that regulate adult neural stem cell fate.

Muckom R, McFarland S, Yang C, Perea B, Gentes M, Murugappan A, Tran E, Dordick JS, Clark DS, Schaffer DV.

Biotechnol Bioeng. 2019 Jan;116(1):193-205. doi: 10.1002/bit.26815. Epub 2018 Nov 6.

PMID:
30102775
18.

Efficacy and outcomes of a summer-based pediatric vision screening program.

Hark LA, Shiuey E, Yu M, Tran E, Mayro EL, Zhan T, Pond M, Tran J, Siam L, Levin AV.

J AAPOS. 2018 Aug;22(4):309.e1-309.e7. doi: 10.1016/j.jaapos.2018.04.006. Epub 2018 Aug 8.

PMID:
30012459
19.

Avelumab: A Novel Anti-PD-L1 Agent in the Treatment of Merkel Cell Carcinoma and Urothelial Cell Carcinoma.

Teets A, Pham L, Tran EL, Hochmuth L, Deshmukh R.

Crit Rev Immunol. 2018;38(3):159-206. doi: 10.1615/CritRevImmunol.2018025204.

PMID:
30004857
20.

Gastrointestinal: Olmesartan-induced enteropathy.

Shahzad MA, Harding D, Ruszkiewicz A, Tran E, England G, Philpott H.

J Gastroenterol Hepatol. 2018 Oct;33(10):1691. doi: 10.1111/jgh.14317. Epub 2018 Jul 2. No abstract available.

PMID:
29968297
21.

Uranium and Cesium sorption to bentonite colloids under carbonate-rich environments: Implications for radionuclide transport.

Tran EL, Teutsch N, Klein-BenDavid O, Weisbrod N.

Sci Total Environ. 2018 Dec 1;643:260-269. doi: 10.1016/j.scitotenv.2018.06.162. Epub 2018 Jun 22.

PMID:
29936167
22.

Wild-type Kras expands and exhausts hematopoietic stem cells.

Sasine JP, Himburg HA, Termini CM, Roos M, Tran E, Zhao L, Kan J, Li M, Zhang Y, de Barros SC, Rao DS, Counter CM, Chute JP.

JCI Insight. 2018 Jun 7;3(11). pii: 98197. doi: 10.1172/jci.insight.98197. [Epub ahead of print]

23.

Resident Wellness in US Ophthalmic Graduate Medical Education: The Resident Perspective.

Tran EM, Scott IU, Clark MA, Greenberg PB.

JAMA Ophthalmol. 2018 Jun 1;136(6):695-701. doi: 10.1001/jamaophthalmol.2018.1383.

PMID:
29801087
24.

Detection and modulation of capsaicin perception in the human oral cavity.

Smutzer G, Jacob JC, Tran JT, Shah DI, Gambhir S, Devassy RK, Tran EB, Hoang BT, McCune JF.

Physiol Behav. 2018 Oct 1;194:120-131. doi: 10.1016/j.physbeh.2018.05.004. Epub 2018 May 9.

PMID:
29751045
25.

Chemical Identity and Mechanism of Action and Formation of a Cell Growth Inhibitory Compound from Polycarbonate Flasks.

Peng J, Zhao Y, Hong Y, Burkhalter RS, Hogue CL, Tran E, Wei L, Romeo L, Dolley-Sonneville P, Melkoumian Z, Liang X, Fang Y.

Anal Chem. 2018 Apr 3;90(7):4603-4610. doi: 10.1021/acs.analchem.7b05102. Epub 2018 Mar 15.

PMID:
29516721
26.

A VCP inhibitor substrate trapping approach (VISTA) enables proteomic profiling of endogenous ERAD substrates.

Huang EY, To M, Tran E, Dionisio LTA, Cho HJ, Baney KLM, Pataki CI, Olzmann JA.

Mol Biol Cell. 2018 May 1;29(9):1021-1030. doi: 10.1091/mbc.E17-08-0514. Epub 2018 Mar 22.

27.

Determination of the low-abundant protein biomarker hCG from dried matrix spots using immunocapture and nano liquid chromatography mass spectrometry.

Rosting C, Tran EV, Gjelstad A, Halvorsen TG.

J Chromatogr B Analyt Technol Biomed Life Sci. 2018 Mar 1;1077-1078:44-51. doi: 10.1016/j.jchromb.2018.01.016. Epub 2018 Feb 3.

PMID:
29413576
28.

Antibiotics Dispensed to Privately Insured Pregnant Women with Urinary Tract Infections - United States, 2014.

Ailes EC, Summers AD, Tran EL, Gilboa SM, Arnold KE, Meaney-Delman D, Reefhuis J.

MMWR Morb Mortal Wkly Rep. 2018 Jan 12;67(1):18-22. doi: 10.15585/mmwr.mm6701a4.

29.

A Milestone for CAR T Cells.

Tran E, Longo DL, Urba WJ.

N Engl J Med. 2017 Dec 28;377(26):2593-2596. doi: 10.1056/NEJMe1714680. Epub 2017 Dec 10. No abstract available.

PMID:
29226781
30.

An Efficient Single-Cell RNA-Seq Approach to Identify Neoantigen-Specific T Cell Receptors.

Lu YC, Zheng Z, Robbins PF, Tran E, Prickett TD, Gartner JJ, Li YF, Ray S, Franco Z, Bliskovsky V, Fitzgerald PC, Rosenberg SA.

Mol Ther. 2018 Feb 7;26(2):379-389. doi: 10.1016/j.ymthe.2017.10.018. Epub 2017 Oct 28.

31.

Fixed-Ratio Combinations.

Tran E.

Clin Diabetes. 2017 Oct;35(4):242-246. doi: 10.2337/cd17-0037. No abstract available.

32.

Identification of essential genes for cancer immunotherapy.

Patel SJ, Sanjana NE, Kishton RJ, Eidizadeh A, Vodnala SK, Cam M, Gartner JJ, Jia L, Steinberg SM, Yamamoto TN, Merchant AS, Mehta GU, Chichura A, Shalem O, Tran E, Eil R, Sukumar M, Guijarro EP, Day CP, Robbins P, Feldman S, Merlino G, Zhang F, Restifo NP.

Nature. 2017 Aug 31;548(7669):537-542. doi: 10.1038/nature23477. Epub 2017 Aug 7.

33.

Prospective Evaluation of Multimodal Optical Imaging with Automated Image Analysis to Detect Oral Neoplasia In Vivo.

Quang T, Tran EQ, Schwarz RA, Williams MD, Vigneswaran N, Gillenwater AM, Richards-Kortum R.

Cancer Prev Res (Phila). 2017 Oct;10(10):563-570. doi: 10.1158/1940-6207.CAPR-17-0054. Epub 2017 Aug 1.

34.

Vitamin D in Orthopaedics.

Tran EY, Uhl RL, Rosenbaum AJ.

JBJS Rev. 2017 Aug;5(8):e1. doi: 10.2106/JBJS.RVW.16.00084. No abstract available.

PMID:
28763352
35.

The role of external beam radiation therapy in well-differentiated thyroid cancer.

Hamilton SN, Tran E, Berthelet E, Wu J.

Expert Rev Anticancer Ther. 2017 Oct;17(10):905-910. doi: 10.1080/14737140.2017.1361324. Epub 2017 Aug 2. Review.

PMID:
28750593
36.

Assessing and Promoting the Wellness of United States Ophthalmology Residents: A Survey of Program Directors.

Tran EM, Scott IU, Clark MA, Greenberg PB.

J Surg Educ. 2018 Jan - Feb;75(1):95-103. doi: 10.1016/j.jsurg.2017.06.012. Epub 2017 Jul 8.

PMID:
28693982
37.

The impact of comorbidities on the benefits of prolonged androgen ablation in patients with T3-4 prostate cancer treated with external beam radiation therapy.

Tran E, Paquette M, Jay J, Hamm J, Liu M, Duncan G, Pickles T, Tyldesley S.

Radiother Oncol. 2017 Aug;124(2):291-295. doi: 10.1016/j.radonc.2017.04.028. Epub 2017 Jul 4.

PMID:
28687398
38.

Population-based assessment of relationship between volume of practice and outcomes in head and neck cancer patients treated in a provincially coordinated radiotherapy program.

McLay M, Stedford A, Yurkowski E, Matlock S, Cheung W, Tran E, Berthelet E, Wu J, Olson R.

Radiother Oncol. 2017 Jul;124(1):174-181. doi: 10.1016/j.radonc.2017.06.001. Epub 2017 Jun 16.

PMID:
28625605
39.
40.

Self-reported Receipt of Dilated Fundus Examinations Among Patients With Diabetes: Medicare Expenditure Panel Survey, 2002-2013.

Tran EMT, Bhattacharya J, Pershing S.

Am J Ophthalmol. 2017 Jul;179:18-24. doi: 10.1016/j.ajo.2017.04.009. Epub 2017 Apr 25.

PMID:
28455116
41.
42.

Appropriateness of direct oral anticoagulant dosing for venous thromboembolism treatment.

Tran E, Duckett A, Fisher S, Bohm N.

J Thromb Thrombolysis. 2017 May;43(4):505-513. doi: 10.1007/s11239-017-1487-z.

PMID:
28271315
43.

T-Cell Transfer Therapy Targeting Mutant KRAS.

Rosenberg SA, Tran E, Robbins PF.

N Engl J Med. 2017 Feb 16;376(7):e11. doi: 10.1056/NEJMc1616637. No abstract available.

PMID:
28199803
44.

'Final common pathway' of human cancer immunotherapy: targeting random somatic mutations.

Tran E, Robbins PF, Rosenberg SA.

Nat Immunol. 2017 Feb 15;18(3):255-262. doi: 10.1038/ni.3682. Review.

45.

T-Cell Transfer Therapy Targeting Mutant KRAS in Cancer.

Tran E, Robbins PF, Lu YC, Prickett TD, Gartner JJ, Jia L, Pasetto A, Zheng Z, Ray S, Groh EM, Kriley IR, Rosenberg SA.

N Engl J Med. 2016 Dec 8;375(23):2255-2262.

46.

Dickkopf-1 promotes hematopoietic regeneration via direct and niche-mediated mechanisms.

Himburg HA, Doan PL, Quarmyne M, Yan X, Sasine J, Zhao L, Hancock GV, Kan J, Pohl KA, Tran E, Chao NJ, Harris JR, Chute JP.

Nat Med. 2017 Jan;23(1):91-99. doi: 10.1038/nm.4251. Epub 2016 Dec 5.

47.

Deletion of the Imprinted Gene Grb10 Promotes Hematopoietic Stem Cell Self-Renewal and Regeneration.

Yan X, Himburg HA, Pohl K, Quarmyne M, Tran E, Zhang Y, Fang T, Kan J, Chao NJ, Zhao L, Doan PL, Chute JP.

Cell Rep. 2016 Nov 1;17(6):1584-1594. doi: 10.1016/j.celrep.2016.10.025.

48.

LncRNAs: Bridging environmental sensing and gene expression.

Beck ZT, Xing Z, Tran EJ.

RNA Biol. 2016 Dec;13(12):1189-1196. Epub 2016 Oct 4.

49.

Cross-Species Transcriptome Profiling Identifies New Alveolar Epithelial Type I Cell-Specific Genes.

Marconett CN, Zhou B, Sunohara M, Pouldar TM, Wang H, Liu Y, Rieger ME, Tran E, Flodby P, Siegmund KD, Crandall ED, Laird-Offringa IA, Borok Z.

Am J Respir Cell Mol Biol. 2017 Mar;56(3):310-321. doi: 10.1165/rcmb.2016-0071OC.

50.

SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis.

Yang Y, La H, Tang K, Miki D, Yang L, Wang B, Duan CG, Nie W, Wang X, Wang S, Pan Y, Tran EJ, An L, Zhang H, Zhu JK.

Nucleic Acids Res. 2017 Jan 9;45(1):181-197. doi: 10.1093/nar/gkw850. Epub 2016 Sep 26.

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