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Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project.

Bastiani M, Andersson JLR, Cordero-Grande L, Murgasova M, Hutter J, Price AN, Makropoulos A, Fitzgibbon SP, Hughes E, Rueckert D, Victor S, Rutherford M, Edwards AD, Smith SM, Tournier JD, Hajnal JV, Jbabdi S, Sotiropoulos SN.

Neuroimage. 2018 May 28. pii: S1053-8119(18)30488-9. doi: 10.1016/j.neuroimage.2018.05.064. [Epub ahead of print] Review.


Reply: Cortical tau pathology: a major player in fibre-specific white matter reductions in Alzheimer's disease?

Mito R, Raffelt D, Dhollander T, Vaughan DN, Tournier JD, Salvado O, Brodtmann A, Rowe CC, Villemagne VL, Connelly A.

Brain. 2018 Jun 1;141(6):e45. doi: 10.1093/brain/awy086. No abstract available.


Voxel-wise comparisons of cellular microstructure and diffusion-MRI in mouse hippocampus using 3D Bridging of Optically-clear histology with Neuroimaging Data (3D-BOND).

Stolp HB, Ball G, So PW, Tournier JD, Jones M, Thornton C, Edwards AD.

Sci Rep. 2018 Mar 5;8(1):4011. doi: 10.1038/s41598-018-22295-9.


The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction.

Makropoulos A, Robinson EC, Schuh A, Wright R, Fitzgibbon S, Bozek J, Counsell SJ, Steinweg J, Vecchiato K, Passerat-Palmbach J, Lenz G, Mortari F, Tenev T, Duff EP, Bastiani M, Cordero-Grande L, Hughes E, Tusor N, Tournier JD, Hutter J, Price AN, Teixeira RPAG, Murgasova M, Victor S, Kelly C, Rutherford MA, Smith SM, Edwards AD, Hajnal JV, Jenkinson M, Rueckert D.

Neuroimage. 2018 Jun;173:88-112. doi: 10.1016/j.neuroimage.2018.01.054. Epub 2018 Jan 31.


Fibre-specific white matter reductions in Alzheimer's disease and mild cognitive impairment.

Mito R, Raffelt D, Dhollander T, Vaughan DN, Tournier JD, Salvado O, Brodtmann A, Rowe CC, Villemagne VL, Connelly A.

Brain. 2018 Jan 4. doi: 10.1093/brain/awx355. [Epub ahead of print]


Contralateral cortico-ponto-cerebellar pathways reconstruction in humans in vivo: implications for reciprocal cerebro-cerebellar structural connectivity in motor and non-motor areas.

Palesi F, De Rinaldis A, Castellazzi G, Calamante F, Muhlert N, Chard D, Tournier JD, Magenes G, D'Angelo E, Gandini Wheeler-Kingshott CAM.

Sci Rep. 2017 Oct 9;7(1):12841. doi: 10.1038/s41598-017-13079-8.


The role of whole-brain diffusion MRI as a tool for studying human in vivo cortical segregation based on a measure of neurite density.

Calamante F, Jeurissen B, Smith RE, Tournier JD, Connelly A.

Magn Reson Med. 2018 May;79(5):2738-2744. doi: 10.1002/mrm.26917. Epub 2017 Sep 16.


[iNKT cells: potential therapeutic targets to fight anthrax].

Le Gars M, Haustant M, Klezovich-Benard M, Paget C, Trottein F, Goossens PL, Tournier JN.

Med Sci (Paris). 2017 May;33(5):488-490. doi: 10.1051/medsci/20173305010. Epub 2017 Jun 14. French. No abstract available.


Time-efficient and flexible design of optimized multishell HARDI diffusion.

Hutter J, Tournier JD, Price AN, Cordero-Grande L, Hughes EJ, Malik S, Steinweg J, Bastiani M, Sotiropoulos SN, Jbabdi S, Andersson J, Edwards AD, Hajnal JV.

Magn Reson Med. 2018 Mar;79(3):1276-1292. doi: 10.1002/mrm.26765. Epub 2017 May 30.


Language ability in preterm children is associated with arcuate fasciculi microstructure at term.

Salvan P, Tournier JD, Batalle D, Falconer S, Chew A, Kennea N, Aljabar P, Dehaene-Lambertz G, Arichi T, Edwards AD, Counsell SJ.

Hum Brain Mapp. 2017 Aug;38(8):3836-3847. doi: 10.1002/hbm.23632. Epub 2017 May 4.


Guidelines on smoking management during the perioperative period.

Pierre S, Rivera C, Le Maître B, Ruppert AM, Bouaziz H, Wirth N, Saboye J, Sautet A, Masquelet AC, Tournier JJ, Martinet Y, Chaput B, Dureuil B.

Anaesth Crit Care Pain Med. 2017 Jun;36(3):195-200. doi: 10.1016/j.accpm.2017.02.002. Epub 2017 Feb 24.


Corrigendum: In vivo dynamics of active edema and lethal factors during anthrax.

Rougeaux C, Becher F, Ezan E, Tournier JN, Goossens PL.

Sci Rep. 2017 Feb 13;7:39579. doi: 10.1038/srep39579. No abstract available.


Early development of structural networks and the impact of prematurity on brain connectivity.

Batalle D, Hughes EJ, Zhang H, Tournier JD, Tusor N, Aljabar P, Wali L, Alexander DC, Hajnal JV, Nosarti C, Edwards AD, Counsell SJ.

Neuroimage. 2017 Apr 1;149:379-392. doi: 10.1016/j.neuroimage.2017.01.065. Epub 2017 Jan 30.


Reconstructing contralateral fiber tracts: methodological aspects of cerebello-thalamocortical pathway reconstruction.

Palesi F, Tournier JD, Calamante F, Muhlert N, Castellazzi G, Chard D, D'Angelo E, Wheeler-Kingshott CG.

Funct Neurol. 2016 Oct/Dec;31(4):229-238.


Tract-specific atrophy in focal epilepsy: Disease, genetics, or seizures?

Vaughan DN, Raffelt D, Curwood E, Tsai MH, Tournier JD, Connelly A, Jackson GD.

Ann Neurol. 2017 Feb;81(2):240-250. doi: 10.1002/ana.24848.


Investigating white matter fibre density and morphology using fixel-based analysis.

Raffelt DA, Tournier JD, Smith RE, Vaughan DN, Jackson G, Ridgway GR, Connelly A.

Neuroimage. 2017 Jan 1;144(Pt A):58-73. doi: 10.1016/j.neuroimage.2016.09.029. Epub 2016 Sep 14.


Mechanisms of Invariant NKT Cell Activity in Restraining Bacillus anthracis Systemic Dissemination.

Le Gars M, Haustant M, Klezovich-Bénard M, Paget C, Trottein F, Goossens PL, Tournier JN.

J Immunol. 2016 Oct 15;197(8):3225-3232. Epub 2016 Sep 7.


Cerebello-cerebral connectivity in the developing brain.

Pieterman K, Batalle D, Dudink J, Tournier JD, Hughes EJ, Barnett M, Benders MJ, Edwards AD, Hoebeek FE, Counsell SJ.

Brain Struct Funct. 2017 May;222(4):1625-1634. doi: 10.1007/s00429-016-1296-8. Epub 2016 Aug 29.


Predicting hand function after hemidisconnection.

Küpper H, Kudernatsch M, Pieper T, Groeschel S, Tournier JD, Raffelt D, Winkler P, Holthausen H, Staudt M.

Brain. 2016 Sep;139(Pt 9):2456-68. doi: 10.1093/brain/aww170. Epub 2016 Jul 6.


Periventricular Nodular Heterotopia: Detection of Abnormal Microanatomic Fiber Structures with Whole-Brain Diffusion MR Imaging Tractography.

Farquharson S, Tournier JD, Calamante F, Mandelstam S, Burgess R, Schneider ME, Berkovic SF, Scheffer IE, Jackson GD, Connelly A.

Radiology. 2016 Dec;281(3):896-906. Epub 2016 Jun 29.


In vivo dynamics of active edema and lethal factors during anthrax.

Rougeaux C, Becher F, Ezan E, Tournier JN, Goossens PL.

Sci Rep. 2016 Mar 21;6:23346. doi: 10.1038/srep23346. Erratum in: Sci Rep. 2017 Feb 13;7:39579.


Physical Sequestration of Bacillus anthracis in the Pulmonary Capillaries in Terminal Infection.

Jouvion G, Corre JP, Khun H, Moya-Nilges M, Roux P, Latroche C, Tournier JN, Huerre M, Chrétien F, Goossens PL.

J Infect Dis. 2016 Jul 15;214(2):281-7. doi: 10.1093/infdis/jiw098. Epub 2016 Mar 14.


Intravital microscopy of the lung: minimizing invasiveness.

Fiole D, Tournier JN.

J Biophotonics. 2016 Sep;9(9):868-78. doi: 10.1002/jbio.201500246. Epub 2016 Feb 5. Review.


Crossing of the epithelial barriers by Bacillus anthracis: the Known and the Unknown.

Goossens PL, Tournier JN.

Front Microbiol. 2015 Oct 9;6:1122. doi: 10.3389/fmicb.2015.01122. eCollection 2015. Review.


[Neonatal treatment of stage 3 Pierre Robin sequence by mean of a naso-pharyngeal tube].

Saboye J, Tournier JJ, Gerardin P, Elicegui M.

Rev Stomatol Chir Maxillofac Chir Orale. 2015 Sep;116(4):235-8. doi: 10.1016/j.revsto.2015.06.002. Epub 2015 Jul 13. French.


SIFT2: Enabling dense quantitative assessment of brain white matter connectivity using streamlines tractography.

Smith RE, Tournier JD, Calamante F, Connelly A.

Neuroimage. 2015 Oct 1;119:338-51. doi: 10.1016/j.neuroimage.2015.06.092. Epub 2015 Jul 8.


Fourier Tract Sampling (FouTS): A framework for improved inference of white matter tracts from diffusion MRI by explicitly modelling tract volume.

Close TG, Tournier JD, Johnston LA, Calamante F, Mareels I, Connelly A.

Neuroimage. 2015 Oct 15;120:412-27. doi: 10.1016/j.neuroimage.2015.05.090. Epub 2015 Jun 9.


Quantification of voxel-wise total fibre density: Investigating the problems associated with track-count mapping.

Calamante F, Smith RE, Tournier JD, Raffelt D, Connelly A.

Neuroimage. 2015 Aug 15;117:284-93. doi: 10.1016/j.neuroimage.2015.05.070. Epub 2015 May 30.


Micropatterned macrophage analysis reveals global cytoskeleton constraints induced by Bacillus anthracis edema toxin.

Trescos Y, Tessier E, Rougeaux C, Goossens PL, Tournier JN.

Infect Immun. 2015 Aug;83(8):3114-25. doi: 10.1128/IAI.00479-15. Epub 2015 May 26.


Connectivity-based fixel enhancement: Whole-brain statistical analysis of diffusion MRI measures in the presence of crossing fibres.

Raffelt DA, Smith RE, Ridgway GR, Tournier JD, Vaughan DN, Rose S, Henderson R, Connelly A.

Neuroimage. 2015 Aug 15;117:40-55. doi: 10.1016/j.neuroimage.2015.05.039. Epub 2015 May 22.


Role of nicotinic acetylcholine receptors in cell proliferation and tumour invasion in broncho-pulmonary carcinomas.

Medjber K, Freidja ML, Grelet S, Lorenzato M, Maouche K, Nawrocki-Raby B, Birembaut P, Polette M, Tournier JM.

Lung Cancer. 2015 Mar;87(3):258-64. doi: 10.1016/j.lungcan.2015.01.001. Epub 2015 Jan 12.


The effects of SIFT on the reproducibility and biological accuracy of the structural connectome.

Smith RE, Tournier JD, Calamante F, Connelly A.

Neuroimage. 2015 Jan 1;104:253-65. doi: 10.1016/j.neuroimage.2014.10.004. Epub 2014 Oct 12.


[Interest of ultrasound-guided lateral pectoral nerve block associated with paravertebral block for complete mastectomy pain management].

Bouzinac A, Tournier JJ, Delbos A, Bérot JE.

Ann Fr Anesth Reanim. 2014 Sep-Oct;33(9-10):548-50. doi: 10.1016/j.annfar.2014.06.011. Epub 2014 Oct 2. French. No abstract available.


[Sensory blockade and efficiency of the "pec block 2" for postoperative analgesia after breast cancer surgery].

Bouzinac A, Tournier JJ, Merouani M, Delbos A.

J Gynecol Obstet Biol Reprod (Paris). 2015 Jan;44(1):98-9. doi: 10.1016/j.jgyn.2014.09.004. Epub 2014 Oct 1. French. No abstract available.


A variable flip angle-based method for reducing blurring in 3D GRASE ASL.

Liang X, Connelly A, Tournier JD, Calamante F.

Phys Med Biol. 2014 Sep 21;59(18):5559-73. doi: 10.1088/0031-9155/59/18/5559. Epub 2014 Aug 29.


Advanced fiber tracking in early acquired brain injury causing cerebral palsy.

Lennartsson F, Holmström L, Eliasson AC, Flodmark O, Forssberg H, Tournier JD, Vollmer B.

AJNR Am J Neuroradiol. 2015 Jan;36(1):181-7. doi: 10.3174/ajnr.A4072. Epub 2014 Aug 28.


Contralateral cerebello-thalamo-cortical pathways with prominent involvement of associative areas in humans in vivo.

Palesi F, Tournier JD, Calamante F, Muhlert N, Castellazzi G, Chard D, D'Angelo E, Wheeler-Kingshott CA.

Brain Struct Funct. 2015 Nov;220(6):3369-84. doi: 10.1007/s00429-014-0861-2. Epub 2014 Aug 19.


Scorpions: a presentation.

Goyffon M, Tournier JN.

Toxins (Basel). 2014 Jul 21;6(7):2137-48. doi: 10.3390/toxins6072137.


Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data.

Jeurissen B, Tournier JD, Dhollander T, Connelly A, Sijbers J.

Neuroimage. 2014 Dec;103:411-426. doi: 10.1016/j.neuroimage.2014.07.061. Epub 2014 Aug 7.


Mapping somatosensory connectivity in adult mice using diffusion MRI tractography and super-resolution track density imaging.

Richards K, Calamante F, Tournier JD, Kurniawan ND, Sadeghian F, Retchford AR, Jones GD, Reid CA, Reutens DC, Ordidge R, Connelly A, Petrou S.

Neuroimage. 2014 Nov 15;102 Pt 2:381-92. doi: 10.1016/j.neuroimage.2014.07.048. Epub 2014 Aug 1.


Two-photon intravital imaging of lungs during anthrax infection reveals long-lasting macrophage-dendritic cell contacts.

Fiole D, Deman P, Trescos Y, Mayol JF, Mathieu J, Vial JC, Douady J, Tournier JN.

Infect Immun. 2014 Feb;82(2):864-72. doi: 10.1128/IAI.01184-13. Epub 2013 Dec 9.


Ultrasound-guided maxillary nerve block in adults: feasibility and efficiency for postoperative analgesia after maxillary osteotomy.

Bouzinac A, Tournier JJ, Dao M, Delbos A.

Minerva Anestesiol. 2014 Jul;80(7):860-1. Epub 2014 Jan 29. No abstract available.


Alterations in the optic radiations of very preterm children-Perinatal predictors and relationships with visual outcomes.

Thompson DK, Thai D, Kelly CE, Leemans A, Tournier JD, Kean MJ, Lee KJ, Inder TE, Doyle LW, Anderson PJ, Hunt RW.

Neuroimage Clin. 2013 Nov 28;4:145-53. doi: 10.1016/j.nicl.2013.11.007. eCollection 2014.


Quantification of track-weighted imaging (TWI): characterisation of within-subject reproducibility and between-subject variability.

Willats L, Raffelt D, Smith RE, Tournier JD, Connelly A, Calamante F.

Neuroimage. 2014 Feb 15;87:18-31. doi: 10.1016/j.neuroimage.2013.11.016. Epub 2013 Nov 16.


Identification and interpretation of microstructural abnormalities in motor pathways in adolescents born preterm.

Groeschel S, Tournier JD, Northam GB, Baldeweg T, Wyatt J, Vollmer B, Connelly A.

Neuroimage. 2014 Feb 15;87:209-19. doi: 10.1016/j.neuroimage.2013.10.034. Epub 2013 Oct 31.


Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging.

Tournier JD, Calamante F, Connelly A.

NMR Biomed. 2013 Dec;26(12):1775-86. doi: 10.1002/nbm.3017. Epub 2013 Aug 29.


Pediatric traumatic brain injury: language outcomes and their relationship to the arcuate fasciculus.

Liégeois FJ, Mahony K, Connelly A, Pigdon L, Tournier JD, Morgan AT.

Brain Lang. 2013 Dec;127(3):388-98. doi: 10.1016/j.bandl.2013.05.003. Epub 2013 Jun 10.


White matter fiber tractography: why we need to move beyond DTI.

Farquharson S, Tournier JD, Calamante F, Fabinyi G, Schneider-Kolsky M, Jackson GD, Connelly A.

J Neurosurg. 2013 Jun;118(6):1367-77. doi: 10.3171/2013.2.JNS121294. Epub 2013 Mar 29.


Contribution of α7 nicotinic receptor to airway epithelium dysfunction under nicotine exposure.

Maouche K, Medjber K, Zahm JM, Delavoie F, Terryn C, Coraux C, Pons S, Cloëz-Tayarani I, Maskos U, Birembaut P, Tournier JM.

Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4099-104. doi: 10.1073/pnas.1216939110. Epub 2013 Feb 19.


Corticobulbar tract changes as predictors of dysarthria in childhood brain injury.

Liégeois F, Tournier JD, Pigdon L, Connelly A, Morgan AT.

Neurology. 2013 Mar 5;80(10):926-32. doi: 10.1212/WNL.0b013e3182840c6d. Epub 2013 Feb 6.


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