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Items: 1 to 50 of 70

1.

EZHIP constrains Polycomb Repressive Complex 2 activity in germ cells.

Ragazzini R, Pérez-Palacios R, Baymaz IH, Diop S, Ancelin K, Zielinski D, Michaud A, Givelet M, Borsos M, Aflaki S, Legoix P, Jansen PWTC, Servant N, Torres-Padilla ME, Bourc'his D, Fouchet P, Vermeulen M, Margueron R.

Nat Commun. 2019 Aug 26;10(1):3858. doi: 10.1038/s41467-019-11800-x.

2.

Genome activation and architecture in the early mammalian embryo.

Jansz N, Torres-Padilla ME.

Curr Opin Genet Dev. 2019 May 22;55:52-58. doi: 10.1016/j.gde.2019.04.011. [Epub ahead of print] Review.

PMID:
31128483
3.

Genome-lamina interactions are established de novo in the early mouse embryo.

Borsos M, Perricone SM, Schauer T, Pontabry J, de Luca KL, de Vries SS, Ruiz-Morales ER, Torres-Padilla ME, Kind J.

Nature. 2019 May;569(7758):729-733. doi: 10.1038/s41586-019-1233-0. Epub 2019 May 22.

PMID:
31118510
4.

SUMO Safeguards Somatic and Pluripotent Cell Identities by Enforcing Distinct Chromatin States.

Cossec JC, Theurillat I, Chica C, Búa Aguín S, Gaume X, Andrieux A, Iturbide A, Jouvion G, Li H, Bossis G, Seeler JS, Torres-Padilla ME, Dejean A.

Cell Stem Cell. 2018 Nov 1;23(5):742-757.e8. doi: 10.1016/j.stem.2018.10.001. Epub 2018 Oct 25.

PMID:
30401455
5.

Challenges and guidelines toward 4D nucleome data and model standards.

Marti-Renom MA, Almouzni G, Bickmore WA, Bystricky K, Cavalli G, Fraser P, Gasser SM, Giorgetti L, Heard E, Nicodemi M, Nollmann M, Orozco M, Pombo A, Torres-Padilla ME.

Nat Genet. 2018 Oct;50(10):1352-1358. doi: 10.1038/s41588-018-0236-3. Epub 2018 Sep 27. Review.

PMID:
30262815
6.

Nimble and Ready to Mingle: Transposon Outbursts of Early Development.

Rodriguez-Terrones D, Torres-Padilla ME.

Trends Genet. 2018 Oct;34(10):806-820. doi: 10.1016/j.tig.2018.06.006. Epub 2018 Jul 26. Review.

PMID:
30057183
7.

Author Correction: H3K64 trimethylation marks heterochromatin and is dynamically remodeled during developmental reprogramming.

Daujat S, Weiss T, Mohn F, Lange UC, Ziegler-Birling C, Zeissler U, Lappe M, Schübeler D, Torres-Padilla ME, Schneider R.

Nat Struct Mol Biol. 2018 Aug;25(8):743. doi: 10.1038/s41594-018-0090-0.

PMID:
29995840
8.

A molecular roadmap for the emergence of early-embryonic-like cells in culture.

Rodriguez-Terrones D, Gaume X, Ishiuchi T, Weiss A, Kopp A, Kruse K, Penning A, Vaquerizas JM, Brino L, Torres-Padilla ME.

Nat Genet. 2018 Jan;50(1):106-119. doi: 10.1038/s41588-017-0016-5. Epub 2017 Dec 18.

9.

LINE-1 activation after fertilization regulates global chromatin accessibility in the early mouse embryo.

Jachowicz JW, Bing X, Pontabry J, Bošković A, Rando OJ, Torres-Padilla ME.

Nat Genet. 2017 Oct;49(10):1502-1510. doi: 10.1038/ng.3945. Epub 2017 Aug 28.

PMID:
28846101
10.

Dynamic changes in H1 subtype composition during epigenetic reprogramming.

Izzo A, Ziegler-Birling C, Hill PWS, Brondani L, Hajkova P, Torres-Padilla ME, Schneider R.

J Cell Biol. 2017 Aug 9. pii: jcb.201611012. doi: 10.1083/jcb.201611012. [Epub ahead of print]

11.

Starting embryonic transcription for the first time.

Iturbide A, Torres-Padilla ME.

Nat Genet. 2017 May 26;49(6):820-821. doi: 10.1038/ng.3880.

PMID:
28546569
12.

SUV4-20 activity in the preimplantation mouse embryo controls timely replication.

Eid A, Rodriguez-Terrones D, Burton A, Torres-Padilla ME.

Genes Dev. 2016 Nov 15;30(22):2513-2526. Epub 2016 Dec 5.

13.

Developmental biology: Panoramic views of the early epigenome.

Vaquerizas JM, Torres-Padilla ME.

Nature. 2016 Sep 22;537(7621):494-496. doi: 10.1038/nature19468. Epub 2016 Sep 14. No abstract available.

PMID:
27626372
14.

A Pluripotency Platform for Prdm14.

Burton A, Torres-Padilla ME.

Dev Cell. 2016 Jul 11;38(1):3-5. doi: 10.1016/j.devcel.2016.06.030.

15.

Characterization of non-canonical Polycomb Repressive Complex 1 subunits during early mouse embryogenesis.

Eid A, Torres-Padilla ME.

Epigenetics. 2016 Jun 2;11(6):389-97. doi: 10.1080/15592294.2016.1172160. Epub 2016 Apr 15.

16.

Building up the nucleus: nuclear organization in the establishment of totipotency and pluripotency during mammalian development.

Borsos M, Torres-Padilla ME.

Genes Dev. 2016 Mar 15;30(6):611-21. doi: 10.1101/gad.273805.115. Review.

17.

Voices of biotech.

Amit I, Baker D, Barker R, Berger B, Bertozzi C, Bhatia S, Biffi A, Demichelis F, Doudna J, Dowdy SF, Endy D, Helmstaedter M, Junca H, June C, Kamb S, Khvorova A, Kim DH, Kim JS, Krishnan Y, Lakadamyali M, Lappalainen T, Lewin S, Liao J, Loman N, Lundberg E, Lynd L, Martin C, Mellman I, Miyawaki A, Mummery C, Nelson K, Paz J, Peralta-Yahya P, Picotti P, Polyak K, Prather K, Qin J, Quake S, Regev A, Rogers JA, Shetty R, Sommer M, Stevens M, Stolovitzky G, Takahashi M, Tang F, Teichmann S, Torres-Padilla ME, Tripathi L, Vemula P, Verdine G, Vollmer F, Wang J, Ying JY, Zhang F, Zhang T.

Nat Biotechnol. 2016 Mar;34(3):270-5. doi: 10.1038/nbt.3502. No abstract available.

PMID:
26963549
18.

Regulation of Reprogramming and Cellular Plasticity through Histone Exchange and Histone Variant Incorporation.

Gaume X, Torres-Padilla ME.

Cold Spring Harb Symp Quant Biol. 2015;80:165-75. doi: 10.1101/sqb.2015.80.027458. Epub 2015 Nov 18. Review.

PMID:
26582788
19.

Dynamics of histone H3 acetylation in the nucleosome core during mouse pre-implantation development.

Ziegler-Birling C, Daujat S, Schneider R, Torres-Padilla ME.

Epigenetics. 2016 Aug 2;11(8):553-62. doi: 10.1080/15592294.2015.1103424. Epub 2015 Oct 19.

20.

Early embryonic-like cells are induced by downregulating replication-dependent chromatin assembly.

Ishiuchi T, Enriquez-Gasca R, Mizutani E, Bošković A, Ziegler-Birling C, Rodriguez-Terrones D, Wakayama T, Vaquerizas JM, Torres-Padilla ME.

Nat Struct Mol Biol. 2015 Sep;22(9):662-71. doi: 10.1038/nsmb.3066. Epub 2015 Aug 3.

PMID:
26237512
21.

LINEs in mice: features, families, and potential roles in early development.

Jachowicz JW, Torres-Padilla ME.

Chromosoma. 2016 Mar;125(1):29-39. doi: 10.1007/s00412-015-0520-2. Epub 2015 May 16. Review.

PMID:
25975894
22.

How cells build totipotency and pluripotency: nuclear, chromatin and transcriptional architecture.

Dang-Nguyen TQ, Torres-Padilla ME.

Curr Opin Cell Biol. 2015 Jun;34:9-15. doi: 10.1016/j.ceb.2015.04.006. Epub 2015 May 15. Review.

PMID:
25935759
23.

Redundant mechanisms to form silent chromatin at pericentromeric regions rely on BEND3 and DNA methylation.

Saksouk N, Barth TK, Ziegler-Birling C, Olova N, Nowak A, Rey E, Mateos-Langerak J, Urbach S, Reik W, Torres-Padilla ME, Imhof A, Déjardin J, Simboeck E.

Mol Cell. 2014 Nov 20;56(4):580-94. doi: 10.1016/j.molcel.2014.10.001. Epub 2014 Nov 6. Erratum in: Mol Cell. 2015 Jan 8;57(1):202. Simboeck, Elisabeth [Added].

24.

Chromatin dynamics in the regulation of cell fate allocation during early embryogenesis.

Burton A, Torres-Padilla ME.

Nat Rev Mol Cell Biol. 2014 Nov;15(11):723-34. doi: 10.1038/nrm3885. Epub 2014 Oct 10. Review.

PMID:
25303116
25.

LINEing germ and embryonic stem cells' silencing of retrotransposons.

Ishiuchi T, Torres-Padilla ME.

Genes Dev. 2014 Jul 1;28(13):1381-3. doi: 10.1101/gad.246462.114.

26.

Relationship between genome and epigenome--challenges and requirements for future research.

Almouzni G, Altucci L, Amati B, Ashley N, Baulcombe D, Beaujean N, Bock C, Bongcam-Rudloff E, Bousquet J, Braun S, Bressac-de Paillerets B, Bussemakers M, Clarke L, Conesa A, Estivill X, Fazeli A, Grgurević N, Gut I, Heijmans BT, Hermouet S, Houwing-Duistermaat J, Iacobucci I, Ilaš J, Kandimalla R, Krauss-Etschmann S, Lasko P, Lehmann S, Lindroth A, Majdič G, Marcotte E, Martinelli G, Martinet N, Meyer E, Miceli C, Mills K, Moreno-Villanueva M, Morvan G, Nickel D, Niesler B, Nowacki M, Nowak J, Ossowski S, Pelizzola M, Pochet R, Potočnik U, Radwanska M, Raes J, Rattray M, Robinson MD, Roelen B, Sauer S, Schinzer D, Slagboom E, Spector T, Stunnenberg HG, Tiligada E, Torres-Padilla ME, Tsonaka R, Van Soom A, Vidaković M, Widschwendter M.

BMC Genomics. 2014 Jun 18;15:487. doi: 10.1186/1471-2164-15-487.

27.

Transcription factor heterogeneity in pluripotent stem cells: a stochastic advantage.

Torres-Padilla ME, Chambers I.

Development. 2014 Jun;141(11):2173-81. doi: 10.1242/dev.102624. Review.

28.

Higher chromatin mobility supports totipotency and precedes pluripotency in vivo.

Bošković A, Eid A, Pontabry J, Ishiuchi T, Spiegelhalter C, Raghu Ram EV, Meshorer E, Torres-Padilla ME.

Genes Dev. 2014 May 15;28(10):1042-7. doi: 10.1101/gad.238881.114.

29.

Heterochromatin establishment at pericentromeres depends on nuclear position.

Jachowicz JW, Santenard A, Bender A, Muller J, Torres-Padilla ME.

Genes Dev. 2013 Nov 15;27(22):2427-32. doi: 10.1101/gad.224550.113.

30.

Single-cell profiling of epigenetic modifiers identifies PRDM14 as an inducer of cell fate in the mammalian embryo.

Burton A, Muller J, Tu S, Padilla-Longoria P, Guccione E, Torres-Padilla ME.

Cell Rep. 2013 Nov 14;5(3):687-701. doi: 10.1016/j.celrep.2013.09.044. Epub 2013 Oct 31.

31.

Live visualization of chromatin dynamics with fluorescent TALEs.

Miyanari Y, Ziegler-Birling C, Torres-Padilla ME.

Nat Struct Mol Biol. 2013 Nov;20(11):1321-4. doi: 10.1038/nsmb.2680. Epub 2013 Oct 6.

PMID:
24096363
32.

Generating different epigenotypes.

Torres-Padilla ME.

Reprod Biomed Online. 2013 Dec;27(6):624-8. doi: 10.1016/j.rbmo.2013.07.016. Epub 2013 Aug 29. Review.

PMID:
24080098
33.

Towards an understanding of the regulatory mechanisms of totipotency.

Ishiuchi T, Torres-Padilla ME.

Curr Opin Genet Dev. 2013 Oct;23(5):512-8. doi: 10.1016/j.gde.2013.06.006. Epub 2013 Aug 10. Review.

PMID:
23942314
34.

How mammals pack their sperm: a variant matter.

Boskovic A, Torres-Padilla ME.

Genes Dev. 2013 Aug 1;27(15):1635-9. doi: 10.1101/gad.226167.113.

35.

Dissecting the role of H3K64me3 in mouse pericentromeric heterochromatin.

Lange UC, Siebert S, Wossidlo M, Weiss T, Ziegler-Birling C, Walter J, Torres-Padilla ME, Daujat S, Schneider R.

Nat Commun. 2013;4:2233. doi: 10.1038/ncomms3233.

PMID:
23903902
36.

Mechanisms and dynamics of heterochromatin formation during mammalian development: closed paths and open questions.

Fadloun A, Eid A, Torres-Padilla ME.

Curr Top Dev Biol. 2013;104:1-45. doi: 10.1016/B978-0-12-416027-9.00001-2. Review.

PMID:
23587237
37.

Chromatin signatures and retrotransposon profiling in mouse embryos reveal regulation of LINE-1 by RNA.

Fadloun A, Le Gras S, Jost B, Ziegler-Birling C, Takahashi H, Gorab E, Carninci P, Torres-Padilla ME.

Nat Struct Mol Biol. 2013 Mar;20(3):332-8. doi: 10.1038/nsmb.2495. Epub 2013 Jan 27.

PMID:
23353788
38.

A germline-centric view of cell fate commitment, reprogramming and immortality.

Torres-Padilla ME, Ciosk R.

Development. 2013 Feb 1;140(3):487-91. doi: 10.1242/dev.087577.

39.

The role of PR-Set7 in replication licensing depends on Suv4-20h.

Beck DB, Burton A, Oda H, Ziegler-Birling C, Torres-Padilla ME, Reinberg D.

Genes Dev. 2012 Dec 1;26(23):2580-9. doi: 10.1101/gad.195636.112. Epub 2012 Nov 14.

40.

A unified phylogeny-based nomenclature for histone variants.

Talbert PB, Ahmad K, Almouzni G, Ausió J, Berger F, Bhalla PL, Bonner WM, Cande WZ, Chadwick BP, Chan SW, Cross GA, Cui L, Dimitrov SI, Doenecke D, Eirin-López JM, Gorovsky MA, Hake SB, Hamkalo BA, Holec S, Jacobsen SE, Kamieniarz K, Khochbin S, Ladurner AG, Landsman D, Latham JA, Loppin B, Malik HS, Marzluff WF, Pehrson JR, Postberg J, Schneider R, Singh MB, Smith MM, Thompson E, Torres-Padilla ME, Tremethick DJ, Turner BM, Waterborg JH, Wollmann H, Yelagandula R, Zhu B, Henikoff S.

Epigenetics Chromatin. 2012 Jun 21;5:7. doi: 10.1186/1756-8935-5-7.

41.

Analysis of active chromatin modifications in early mammalian embryos reveals uncoupling of H2A.Z acetylation and H3K36 trimethylation from embryonic genome activation.

Bošković A, Bender A, Gall L, Ziegler-Birling C, Beaujean N, Torres-Padilla ME.

Epigenetics. 2012 Jul;7(7):747-57. doi: 10.4161/epi.20584. Epub 2012 Jul 1.

PMID:
22647320
42.

Control of ground-state pluripotency by allelic regulation of Nanog.

Miyanari Y, Torres-Padilla ME.

Nature. 2012 Feb 12;483(7390):470-3. doi: 10.1038/nature10807.

PMID:
22327294
43.

Epigenetic reprogramming and development: a unique heterochromatin organization in the preimplantation mouse embryo.

Burton A, Torres-Padilla ME.

Brief Funct Genomics. 2010 Dec;9(5-6):444-54. doi: 10.1093/bfgp/elq027. Epub 2010 Dec 23.

44.

Epigenetic regulation of reprogramming factors towards pluripotency in mouse preimplantation development.

Miyanari Y, Torres-Padilla ME.

Curr Opin Endocrinol Diabetes Obes. 2010 Dec;17(6):500-6. doi: 10.1097/MED.0b013e3283405325. Review.

PMID:
20962633
45.

Heterochromatin formation in the mouse embryo requires critical residues of the histone variant H3.3.

Santenard A, Ziegler-Birling C, Koch M, Tora L, Bannister AJ, Torres-Padilla ME.

Nat Cell Biol. 2010 Sep;12(9):853-62. doi: 10.1038/ncb2089. Epub 2010 Aug 1.

46.

TBP2 is essential for germ cell development by regulating transcription and chromatin condensation in the oocyte.

Gazdag E, Santenard A, Ziegler-Birling C, Altobelli G, Poch O, Tora L, Torres-Padilla ME.

Genes Dev. 2009 Sep 15;23(18):2210-23. doi: 10.1101/gad.535209.

47.

Distribution of p53 binding protein 1 (53BP1) and phosphorylated H2A.X during mouse preimplantation development in the absence of DNA damage.

Ziegler-Birling C, Helmrich A, Tora L, Torres-Padilla ME.

Int J Dev Biol. 2009;53(7):1003-11. doi: 10.1387/ijdb.082707cz.

48.

H3K64 trimethylation marks heterochromatin and is dynamically remodeled during developmental reprogramming.

Daujat S, Weiss T, Mohn F, Lange UC, Ziegler-Birling C, Zeissler U, Lappe M, Schübeler D, Torres-Padilla ME, Schneider R.

Nat Struct Mol Biol. 2009 Jul;16(7):777-81. doi: 10.1038/nsmb.1629. Epub 2009 Jun 28. Erratum in: Nat Struct Mol Biol. 2018 Aug;25(8):743.

PMID:
19561610
49.

Epigenetic reprogramming in mammalian reproduction: contribution from histone variants.

Santenard A, Torres-Padilla ME.

Epigenetics. 2009 Feb 16;4(2):80-4. Epub 2009 Feb 14. Review.

PMID:
19242119
50.

Monomethylation of histone H4-lysine 20 is involved in chromosome structure and stability and is essential for mouse development.

Oda H, Okamoto I, Murphy N, Chu J, Price SM, Shen MM, Torres-Padilla ME, Heard E, Reinberg D.

Mol Cell Biol. 2009 Apr;29(8):2278-95. doi: 10.1128/MCB.01768-08. Epub 2009 Feb 17.

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