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Items: 29

1.

Identifying yeasts using surface enhanced Raman spectroscopy.

Lemma T, Wang J, Arstila K, Hytönen VP, Toppari JJ.

Spectrochim Acta A Mol Biomol Spectrosc. 2019 Jul 5;218:299-307. doi: 10.1016/j.saa.2019.04.010. Epub 2019 Apr 13.

PMID:
31005737
2.

Plasmonic Nanosensor Array for Multiplexed DNA-based Pathogen Detection.

Zopf D, Pittner A, Dathe A, Grosse N, Csáki A, Arstila K, Toppari JJ, Schott W, Dontsov D, Uhlrich G, Fritzsche W, Stranik O.

ACS Sens. 2019 Feb 22;4(2):335-343. doi: 10.1021/acssensors.8b01073. Epub 2019 Feb 4.

PMID:
30657315
3.

Surface Characteristics Control the Attachment and Functionality of (Chimeric) Avidin.

Shao D, Tapio K, Auer S, Toppari JJ, Hytönen VP, Ahlskog M.

Langmuir. 2018 Dec 18;34(50):15335-15342. doi: 10.1021/acs.langmuir.8b02855. Epub 2018 Nov 27.

PMID:
30398878
4.

A DNA-nanoparticle actuator enabling optical monitoring of nanoscale movements induced by an electric field.

Tapio K, Shao D, Auer S, Tuppurainen J, Ahlskog M, Hytönen VP, Toppari JJ.

Nanoscale. 2018 Nov 7;10(41):19297-19309. doi: 10.1039/c8nr05535a. Epub 2018 Sep 13.

PMID:
30209452
5.

Coherent Light Harvesting through Strong Coupling to Confined Light.

Groenhof G, Toppari JJ.

J Phys Chem Lett. 2018 Sep 6;9(17):4848-4851. doi: 10.1021/acs.jpclett.8b02032. Epub 2018 Aug 13.

6.

DNA-Assisted Molecular Lithography.

Shen B, Linko V, Toppari JJ.

Methods Mol Biol. 2018;1811:299-314. doi: 10.1007/978-1-4939-8582-1_20.

PMID:
29926461
7.

Plasmonic nanostructures through DNA-assisted lithography.

Shen B, Linko V, Tapio K, Pikker S, Lemma T, Gopinath A, Gothelf KV, Kostiainen MA, Toppari JJ.

Sci Adv. 2018 Feb 2;4(2):eaap8978. doi: 10.1126/sciadv.aap8978. eCollection 2018 Feb.

8.

Multiscale Molecular Dynamics Simulations of Polaritonic Chemistry.

Luk HL, Feist J, Toppari JJ, Groenhof G.

J Chem Theory Comput. 2017 Sep 12;13(9):4324-4335. doi: 10.1021/acs.jctc.7b00388. Epub 2017 Aug 17.

PMID:
28749690
9.

Toward Single Electron Nanoelectronics Using Self-Assembled DNA Structure.

Tapio K, Leppiniemi J, Shen B, Hytönen VP, Fritzsche W, Toppari JJ.

Nano Lett. 2016 Nov 9;16(11):6780-6786. Epub 2016 Oct 12.

PMID:
27700108
10.

Core-Shell Nanorod Columnar Array Combined with Gold Nanoplate-Nanosphere Assemblies Enable Powerful In Situ SERS Detection of Bacteria.

Qiu L, Wang W, Zhang A, Zhang N, Lemma T, Ge H, Toppari JJ, Hytönen VP, Wang J.

ACS Appl Mater Interfaces. 2016 Sep 21;8(37):24394-403. doi: 10.1021/acsami.6b06674. Epub 2016 Sep 7.

PMID:
27574829
11.

Improved antifouling properties and selective biofunctionalization of stainless steel by employing heterobifunctional silane-polyethylene glycol overlayers and avidin-biotin technology.

Hynninen V, Vuori L, Hannula M, Tapio K, Lahtonen K, Isoniemi T, Lehtonen E, Hirsimäki M, Toppari JJ, Valden M, Hytönen VP.

Sci Rep. 2016 Jul 6;6:29324. doi: 10.1038/srep29324.

12.

Metallic Nanostructures Based on DNA Nanoshapes.

Shen B, Tapio K, Linko V, Kostiainen MA, Toppari JJ.

Nanomaterials (Basel). 2016 Aug 10;6(8). pii: E146. doi: 10.3390/nano6080146. Review.

13.

DNA-Based Enzyme Reactors and Systems.

Linko V, Nummelin S, Aarnos L, Tapio K, Toppari JJ, Kostiainen MA.

Nanomaterials (Basel). 2016 Jul 27;6(8). pii: E139. doi: 10.3390/nano6080139. Review.

14.

One-step large-scale deposition of salt-free DNA origami nanostructures.

Linko V, Shen B, Tapio K, Toppari JJ, Kostiainen MA, Tuukkanen S.

Sci Rep. 2015 Oct 23;5:15634. doi: 10.1038/srep15634.

15.

Custom-shaped metal nanostructures based on DNA origami silhouettes.

Shen B, Linko V, Tapio K, Kostiainen MA, Toppari JJ.

Nanoscale. 2015 Jul 14;7(26):11267-72. doi: 10.1039/c5nr02300a.

PMID:
26066528
16.

Dielectrophoretic trapping of multilayer DNA origami nanostructures and DNA origami-induced local destruction of silicon dioxide.

Shen B, Linko V, Dietz H, Toppari JJ.

Electrophoresis. 2015 Jan;36(2):255-62. doi: 10.1002/elps.201400323. Epub 2014 Oct 27.

PMID:
25225147
17.

Direct optical measurement of light coupling into planar waveguide by plasmonic nanoparticles.

Pennanen AM, Toppari JJ.

Opt Express. 2013 Jan 14;21 Suppl 1:A23-35. doi: 10.1364/OE.21.000A23.

PMID:
23389272
18.

Strong coupling between surface plasmon polaritons and β-carotene in nanolayered system.

Baieva S, Ihalainen JA, Toppari JJ.

J Chem Phys. 2013 Jan 28;138(4):044707. doi: 10.1063/1.4776233.

PMID:
23387615
19.

Plasmonic coupling and long-range transfer of an excitation along a DNA nanowire.

Toppari JJ, Wirth J, Garwe F, Stranik O, Csaki A, Bergmann J, Paa W, Fritzsche W.

ACS Nano. 2013 Feb 26;7(2):1291-8. doi: 10.1021/nn304789w. Epub 2013 Jan 23.

PMID:
23305550
20.

Strong coupling between surface plasmon polaritons and Sulforhodamine 101 dye.

Baieva SV, Hakala TK, Toppari JJ.

Nanoscale Res Lett. 2012 Mar 19;7:191. doi: 10.1186/1556-276X-7-191.

21.

Growth of immobilized DNA by polymerase: bridging nanoelectrodes with individual dsDNA molecules.

Linko V, Leppiniemi J, Shen B, Niskanen E, Hytönen VP, Toppari JJ.

Nanoscale. 2011 Sep 1;3(9):3788-92. doi: 10.1039/c1nr10518c. Epub 2011 Aug 3.

PMID:
21811739
22.

Trapping and immobilization of DNA molecules between nanoelectrodes.

Kuzyk A, Toppari JJ, Törmä P.

Methods Mol Biol. 2011;749:223-34. doi: 10.1007/978-1-61779-142-0_16.

PMID:
21674376
23.

Defined-size DNA triple crossover construct for molecular electronics: modification, positioning and conductance properties.

Linko V, Leppiniemi J, Paasonen ST, Hytönen VP, Toppari JJ.

Nanotechnology. 2011 Jul 8;22(27):275610. doi: 10.1088/0957-4484/22/27/275610. Epub 2011 May 25.

PMID:
21613681
24.

Field-induced nanolithography for high-throughput pattern transfer.

Hakala TK, Linko V, Eskelinen AP, Toppari JJ, Kuzyk A, Törmä P.

Small. 2009 Dec;5(23):2683-6. doi: 10.1002/smll.200901326. No abstract available.

PMID:
19856328
25.

Vacuum Rabi splitting and strong-coupling dynamics for surface-plasmon polaritons and rhodamine 6G molecules.

Hakala TK, Toppari JJ, Kuzyk A, Pettersson M, Tikkanen H, Kunttu H, Törmä P.

Phys Rev Lett. 2009 Jul 31;103(5):053602. Epub 2009 Jul 31.

PMID:
19792498
26.

Characterization of the conductance mechanisms of DNA origami by AC impedance spectroscopy.

Linko V, Paasonen ST, Kuzyk A, Törmä P, Toppari JJ.

Small. 2009 Nov;5(21):2382-6. doi: 10.1002/smll.200900683. No abstract available.

PMID:
19637269
27.

Dielectrophoretic trapping of DNA origami.

Kuzyk A, Yurke B, Toppari JJ, Linko V, Törmä P.

Small. 2008 Apr;4(4):447-50. doi: 10.1002/smll.200701320. No abstract available.

PMID:
18350556
28.

Molecular coupling of light with plasmonic waveguides.

Kuzyk A, Pettersson M, Toppari JJ, Hakala TK, Tikkanen H, Kunttu H, Törmä P.

Opt Express. 2007 Aug 6;15(16):9908-17.

PMID:
19547341
29.

Carbon nanotubes as electrodes for dielectrophoresis of DNA.

Tuukkanen S, Toppari JJ, Kuzyk A, Hirviniemi L, Hytönen VP, Ihalainen T, Törmä P.

Nano Lett. 2006 Jul;6(7):1339-43.

PMID:
16834407

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