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Items: 46

1.

The Quantitative Genetic Control of Root Architecture in Maize.

Bray AL, Topp CN.

Plant Cell Physiol. 2018 Oct 1;59(10):1919-1930. doi: 10.1093/pcp/pcy141.

2.

Improving model prediction of soil N2O emissions through Bayesian calibration.

Myrgiotis V, Williams M, Topp CFE, Rees RM.

Sci Total Environ. 2018 May 15;624:1467-1477. doi: 10.1016/j.scitotenv.2017.12.202. Epub 2017 Dec 27.

PMID:
29929257
3.

Topological Data Analysis as a Morphometric Method: Using Persistent Homology to Demarcate a Leaf Morphospace.

Li M, An H, Angelovici R, Bagaza C, Batushansky A, Clark L, Coneva V, Donoghue MJ, Edwards E, Fajardo D, Fang H, Frank MH, Gallaher T, Gebken S, Hill T, Jansky S, Kaur B, Klahs PC, Klein LL, Kuraparthy V, Londo J, Migicovsky Z, Miller A, Mohn R, Myles S, Otoni WC, Pires JC, Rieffer E, Schmerler S, Spriggs E, Topp CN, Van Deynze A, Zhang K, Zhu L, Zink BM, Chitwood DH.

Front Plant Sci. 2018 Apr 25;9:553. doi: 10.3389/fpls.2018.00553. eCollection 2018.

4.

The Persistent Homology Mathematical Framework Provides Enhanced Genotype-to-Phenotype Associations for Plant Morphology.

Li M, Frank MH, Coneva V, Mio W, Chitwood DH, Topp CN.

Plant Physiol. 2018 Aug;177(4):1382-1395. doi: 10.1104/pp.18.00104. Epub 2018 Jun 5.

5.

Spatially explicit estimation of heat stress-related impacts of climate change on the milk production of dairy cows in the United Kingdom.

Fodor N, Foskolos A, Topp CFE, Moorby JM, Pásztor L, Foyer CH.

PLoS One. 2018 May 8;13(5):e0197076. doi: 10.1371/journal.pone.0197076. eCollection 2018.

6.

archiDART v3.0: A new data analysis pipeline allowing the topological analysis of plant root systems.

Delory BM, Li M, Topp CN, Lobet G.

F1000Res. 2018 Jan 8;7:22. doi: 10.12688/f1000research.13541.1. eCollection 2018.

7.

Husk to caryopsis adhesion in barley is influenced by pre- and post-anthesis temperatures through changes in a cuticular cementing layer on the caryopsis.

Brennan M, Shepherd T, Mitchell S, Topp CFE, Hoad SP.

BMC Plant Biol. 2017 Oct 23;17(1):169. doi: 10.1186/s12870-017-1113-4.

8.

Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences.

Bucksch A, Atta-Boateng A, Azihou AF, Battogtokh D, Baumgartner A, Binder BM, Braybrook SA, Chang C, Coneva V, DeWitt TJ, Fletcher AG, Gehan MA, Diaz-Martinez DH, Hong L, Iyer-Pascuzzi AS, Klein LL, Leiboff S, Li M, Lynch JP, Maizel A, Maloof JN, Markelz RJC, Martinez CC, Miller LA, Mio W, Palubicki W, Poorter H, Pradal C, Price CA, Puttonen E, Reese JB, Rellán-Álvarez R, Spalding EP, Sparks EE, Topp CN, Williams JH, Chitwood DH.

Front Plant Sci. 2017 Jun 9;8:900. doi: 10.3389/fpls.2017.00900. eCollection 2017. Review.

9.

Persistent homology and the branching topologies of plants.

Li M, Duncan K, Topp CN, Chitwood DH.

Am J Bot. 2017 Mar;104(3):349-353. doi: 10.3732/ajb.1700046. Epub 2017 Mar 24. No abstract available.

10.

Relative emissions intensity of dairy production systems: employing different functional units in life-cycle assessment.

Ross SA, Topp CFE, Ennos RA, Chagunda MGG.

Animal. 2017 Aug;11(8):1381-1388. doi: 10.1017/S1751731117000052. Epub 2017 Feb 10.

11.

A Comparative Nitrogen Balance and Productivity Analysis of Legume and Non-legume Supported Cropping Systems: The Potential Role of Biological Nitrogen Fixation.

Iannetta PP, Young M, Bachinger J, Bergkvist G, Doltra J, Lopez-Bellido RJ, Monti M, Pappa VA, Reckling M, Topp CF, Walker RL, Rees RM, Watson CA, James EK, Squire GR, Begg GS.

Front Plant Sci. 2016 Nov 21;7:1700. eCollection 2016.

12.

Hope in Change: The Role of Root Plasticity in Crop Yield Stability.

Topp CN.

Plant Physiol. 2016 Sep;172(1):5-6. doi: 10.1104/pp.16.01257. No abstract available.

13.

The Quest for Understanding Phenotypic Variation via Integrated Approaches in the Field Environment.

Pauli D, Chapman SC, Bart R, Topp CN, Lawrence-Dill CJ, Poland J, Gore MA.

Plant Physiol. 2016 Oct;172(2):622-634. Epub 2016 Aug 1. Review. No abstract available.

14.

Key challenges and priorities for modelling European grasslands under climate change.

Kipling RP, Virkajärvi P, Breitsameter L, Curnel Y, De Swaef T, Gustavsson AM, Hennart S, Höglind M, Järvenranta K, Minet J, Nendel C, Persson T, Picon-Cochard C, Rolinski S, Sandars DL, Scollan ND, Sebek L, Seddaiu G, Topp CFE, Twardy S, Van Middelkoop J, Wu L, Bellocchi G.

Sci Total Environ. 2016 Oct 1;566-567:851-864. doi: 10.1016/j.scitotenv.2016.05.144. Epub 2016 May 31. Review.

PMID:
27259038
15.

How can we harness quantitative genetic variation in crop root systems for agricultural improvement?

Topp CN, Bray AL, Ellis NA, Liu Z.

J Integr Plant Biol. 2016 Mar;58(3):213-25. doi: 10.1111/jipb.12470. Epub 2016 Mar 11. Review.

PMID:
26911925
16.

[Case study shows that the case manager function for cancer patients is used unevenly across the different cancer forms].

Jakobsen SF, Bjerrum A, Grønberg TL, Thomsen P, Topp C.

Ugeskr Laeger. 2015 Jun 8;177(24):1172-4. Danish.

PMID:
26554057
17.

Digital imaging of root traits (DIRT): a high-throughput computing and collaboration platform for field-based root phenomics.

Das A, Schneider H, Burridge J, Ascanio AK, Wojciechowski T, Topp CN, Lynch JP, Weitz JS, Bucksch A.

Plant Methods. 2015 Nov 2;11:51. doi: 10.1186/s13007-015-0093-3. eCollection 2015.

18.

Predictive Value Tools as an Aid in Chemopreventive Agent Development.

Dunn BK, Steele VE, Fagerstrom RM, Topp CF, Ransohoff D, Cunningham C, Lubet R, Ford LG, Kramer BS.

J Natl Cancer Inst. 2015 Sep 28;107(12):djv259. doi: 10.1093/jnci/djv259. Print 2015 Dec.

19.

DynamicRoots: A Software Platform for the Reconstruction and Analysis of Growing Plant Roots.

Symonova O, Topp CN, Edelsbrunner H.

PLoS One. 2015 Jun 1;10(6):e0127657. doi: 10.1371/journal.pone.0127657. eCollection 2015.

20.

The WHO-5 Well-Being Index: a systematic review of the literature.

Topp CW, Østergaard SD, Søndergaard S, Bech P.

Psychother Psychosom. 2015;84(3):167-76. doi: 10.1159/000376585. Epub 2015 Mar 28. Review.

21.

Quantitative trait locus mapping reveals regions of the maize genome controlling root system architecture.

Zurek PR, Topp CN, Benfey PN.

Plant Physiol. 2015 Apr;167(4):1487-96. doi: 10.1104/pp.114.251751. Epub 2015 Feb 11.

22.

Revealing plant cryptotypes: defining meaningful phenotypes among infinite traits.

Chitwood DH, Topp CN.

Curr Opin Plant Biol. 2015 Apr;24:54-60. doi: 10.1016/j.pbi.2015.01.009. Epub 2015 Feb 3. Review.

PMID:
25658908
23.

Nitrous oxide emissions from cattle excreta applied to a Scottish grassland: effects of soil and climatic conditions and a nitrification inhibitor.

Bell MJ, Rees RM, Cloy JM, Topp CF, Bagnall A, Chadwick DR.

Sci Total Environ. 2015 Mar 1;508:343-53. doi: 10.1016/j.scitotenv.2014.12.008. Epub 2014 Dec 10.

PMID:
25497356
24.

[Case study shows that the case manager function for cancer patients is used unevenly across the different cancer forms].

Jakobsen SF, Bjerrum A, Grønberg TL, Thomsen P, Topp C.

Ugeskr Laeger. 2014 Jun 23;176(26):V12130708. Danish.

PMID:
25294577
25.

Review and analysis of global agricultural N₂O emissions relevant to the UK.

Buckingham S, Anthony S, Bellamy PH, Cardenas LM, Higgins S, McGeough K, Topp CF.

Sci Total Environ. 2014 Jul 15;487:164-72. doi: 10.1016/j.scitotenv.2014.02.122. Epub 2014 May 3.

PMID:
24784741
26.

How migratory thrushes conquered northern North America: a comparative phylogeography approach.

Topp CM, Pruett CL, McCracken KG, Winker K.

PeerJ. 2013 Nov 12;1:e206. doi: 10.7717/peerj.206. eCollection 2013.

27.

10 thrigs to consider in a physician employment agreement.

Topp CH, Menchaca ER.

Minn Med. 2013 Jun;96(6):28-30. No abstract available.

PMID:
23862367
28.

3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture.

Topp CN, Iyer-Pascuzzi AS, Anderson JT, Lee CR, Zurek PR, Symonova O, Zheng Y, Bucksch A, Mileyko Y, Galkovskyi T, Moore BT, Harer J, Edelsbrunner H, Mitchell-Olds T, Weitz JS, Benfey PN.

Proc Natl Acad Sci U S A. 2013 Apr 30;110(18):E1695-704. doi: 10.1073/pnas.1304354110. Epub 2013 Apr 11.

29.

GiA Roots: software for the high throughput analysis of plant root system architecture.

Galkovskyi T, Mileyko Y, Bucksch A, Moore B, Symonova O, Price CA, Topp CN, Iyer-Pascuzzi AS, Zurek PR, Fang S, Harer J, Benfey PN, Weitz JS.

BMC Plant Biol. 2012 Jul 26;12:116. doi: 10.1186/1471-2229-12-116.

30.

A novel mechanism of abscission in fronds of Lemna minor L. and the effect of silver ions.

Topp C, Henke R, Keresztes A, Fischer W, Eberius M, Appenroth KJ.

Plant Biol (Stuttg). 2011 May;13(3):517-23. doi: 10.1111/j.1438-8677.2010.00394.x. Epub 2010 Sep 14.

PMID:
21489103
31.

Distinct influences of tandem repeats and retrotransposons on CENH3 nucleosome positioning.

Gent JI, Schneider KL, Topp CN, Rodriguez C, Presting GG, Dawe RK.

Epigenetics Chromatin. 2011 Feb 25;4:3. doi: 10.1186/1756-8935-4-3.

32.

Modelling Common Agricultural Policy-Water Framework Directive interactions and cost-effectiveness of measures to reduce nitrogen pollution.

Mouratiadou I, Russell G, Topp C, Louhichi K, Moran D.

Water Sci Technol. 2010;61(10):2689-97. doi: 10.2166/wst.2010.216.

PMID:
20453343
33.

DNA binding of centromere protein C (CENPC) is stabilized by single-stranded RNA.

Du Y, Topp CN, Dawe RK.

PLoS Genet. 2010 Feb 5;6(2):e1000835. doi: 10.1371/journal.pgen.1000835.

34.

Identification of a maize neocentromere in an oat-maize addition line.

Topp CN, Okagaki RJ, Melo JR, Kynast RG, Phillips RL, Dawe RK.

Cytogenet Genome Res. 2009;124(3-4):228-38. doi: 10.1159/000218128. Epub 2009 Jun 25.

35.

Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z.

Deal RB, Topp CN, McKinney EC, Meagher RB.

Plant Cell. 2007 Jan;19(1):74-83. Epub 2007 Jan 12.

36.

Transformation of rice with long DNA-segments consisting of random genomic DNA or centromere-specific DNA.

Phan BH, Jin W, Topp CN, Zhong CX, Jiang J, Dawe RK, Parrott WA.

Transgenic Res. 2007 Jun;16(3):341-51. Epub 2006 Nov 14.

PMID:
17103243
37.

Reinterpreting pericentromeric heterochromatin.

Topp CN, Dawe RK.

Curr Opin Plant Biol. 2006 Dec;9(6):647-53. Epub 2006 Oct 2. Review.

PMID:
17015032
38.

Caseinomacropeptide self-association is dependent on whether the peptide is free or restricted in kappa-casein.

Mikkelsen TL, Frøkiaer H, Topp C, Bonomi F, Iametti S, Picariello G, Ferranti P, Barkholt V.

J Dairy Sci. 2005 Dec;88(12):4228-38.

39.

Centromere-encoded RNAs are integral components of the maize kinetochore.

Topp CN, Zhong CX, Dawe RK.

Proc Natl Acad Sci U S A. 2004 Nov 9;101(45):15986-91. Epub 2004 Oct 28.

40.

Centromeric retroelements and satellites interact with maize kinetochore protein CENH3.

Zhong CX, Marshall JB, Topp C, Mroczek R, Kato A, Nagaki K, Birchler JA, Jiang J, Dawe RK.

Plant Cell. 2002 Nov;14(11):2825-36.

41.

Integration of the gene for carboxin resistance does not impact the Ustilago maydis-maize interaction.

Topp CN, Ruiz-Herrera J, Martínez-Espinoza AD, Gold SE.

Curr Microbiol. 2002 Jan;44(1):67-70.

PMID:
11727044
42.

Influence of local airflow on the pollutant emission from indoor building surfaces.

Topp C, Nielsen PV, Heiselberg P.

Indoor Air. 2001 Sep;11(3):162-70.

PMID:
11521500
43.

Studies on the metabolism of calcium stearoyl-2-lactylate in the rat, mouse, guinea-pig and man.

Phillips JC, Topp C, Gangolli SD.

Food Cosmet Toxicol. 1981 Feb;19(1):7-11. No abstract available.

PMID:
7262734
44.

The effect of ethoxyquin on the hepatotoxicity of dimethylnitrosamine and carbon tetrachloride in the rat [proceedings].

Phillips JC, Topp CE, Mendis D, Walker R, Gangolli SD.

Biochem Soc Trans. 1978;6(6):1244-6. No abstract available.

PMID:
744401
45.

Intraoral blue nevus: review of the literature and report of case.

Rask KR, Topp CW, Tilson HB.

J Oral Surg. 1972 Mar;30(3):212-4. Review. No abstract available.

PMID:
4551116
46.

Medical evidence in pension adjudication.

TOPP CB.

Treat Serv Bull. 1952 May;7(5):195-208. No abstract available.

PMID:
14931543

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