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Items: 1 to 50 of 71

1.

Corrigendum: mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species.

Arredondo-Alonso S, Rogers MRC, Braat JC, Verschuuren TD, Top J, Corander J, Willems RJL, Schürch AC.

Microb Genom. 2019 Jan;5(1). doi: 10.1099/mgen.0.000249. No abstract available.

2.

Enterococcus faecium TIR-Domain Genes Are Part of a Gene Cluster Which Promotes Bacterial Survival in Blood.

Wagner TM, Janice J, Paganelli FL, Willems RJ, Askarian F, Pedersen T, Top J, de Haas C, van Strijp JA, Johannessen M, Hegstad K.

Int J Microbiol. 2018 Dec 3;2018:1435820. doi: 10.1155/2018/1435820. eCollection 2018.

3.

mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species.

Arredondo-Alonso S, Rogers MRC, Braat JC, Verschuuren TD, Top J, Corander J, Willems RJL, Schürch AC.

Microb Genom. 2018 Nov;4(11). doi: 10.1099/mgen.0.000224. Epub 2018 Nov 1. Erratum in: Microb Genom. 2019 Jan;5(1):.

4.

Using Cognitive Agents to Train Negotiation Skills.

Stevens CA, Daamen J, Gaudrain E, Renkema T, Top JD, Cnossen F, Taatgen NA.

Front Psychol. 2018 Feb 19;9:154. doi: 10.3389/fpsyg.2018.00154. eCollection 2018.

5.

Septic Arthritis Versus Lyme Arthritis: A Case of Diagnostic Difficulty.

Keane B, Top J, Burbridge M.

Hosp Pediatr. 2018 Mar;8(3):170-172. doi: 10.1542/hpeds.2017-0142. No abstract available.

6.

Identification of a Novel Genomic Island Associated with vanD-Type Vancomycin Resistance in Six Dutch Vancomycin-Resistant Enterococcus faecium Isolates.

Top J, Sinnige JC, Brouwer EC, Werner G, Corander J, Severin JA, Jansen R, Bathoorn E, Bonten MJM, Rossen JWA, Willems RJL.

Antimicrob Agents Chemother. 2018 Feb 23;62(3). pii: e01793-17. doi: 10.1128/AAC.01793-17. Print 2018 Mar.

7.

Intestinal carriage of ampicillin- and vancomycin-resistant Enterococcus faecium in humans, dogs and cats in the Netherlands.

van den Bunt G, Top J, Hordijk J, de Greeff SC, Mughini-Gras L, Corander J, van Pelt W, Bonten MJM, Fluit AC, Willems RJL.

J Antimicrob Chemother. 2018 Mar 1;73(3):607-614. doi: 10.1093/jac/dkx455.

PMID:
29294027
8.

Characterization of Enterococcus Isolates Colonizing the Intestinal Tract of Intensive Care Unit Patients Receiving Selective Digestive Decontamination.

Bello Gonzalez TDJ, Pham P, Top J, Willems RJL, van Schaik W, van Passel MWJ, Smidt H.

Front Microbiol. 2017 Aug 28;8:1596. doi: 10.3389/fmicb.2017.01596. eCollection 2017.

9.

Antibiotic-Driven Dysbiosis Mediates Intraluminal Agglutination and Alternative Segregation of Enterococcus faecium from the Intestinal Epithelium.

Hendrickx AP, Top J, Bayjanov JR, Kemperman H, Rogers MR, Paganelli FL, Bonten MJ, Willems RJ.

MBio. 2015 Nov 10;6(6):e01346-15. doi: 10.1128/mBio.01346-15.

10.

Core Genome Multilocus Sequence Typing Scheme for High- Resolution Typing of Enterococcus faecium.

de Been M, Pinholt M, Top J, Bletz S, Mellmann A, van Schaik W, Brouwer E, Rogers M, Kraat Y, Bonten M, Corander J, Westh H, Harmsen D, Willems RJ.

J Clin Microbiol. 2015 Dec;53(12):3788-97.

11.

Growth condition-dependent cell surface proteome analysis of Enterococcus faecium.

Sinnige JC, de Been M, Zhou M, Bonten MJ, Willems RJ, Top J.

Proteomics. 2015 Nov;15(22):3806-14. doi: 10.1002/pmic.201500138. Epub 2015 Oct 2.

PMID:
26316380
12.

Environmental survival of vancomycin-sensitive ampicillin-resistant Enterococcus faecium (AREfm).

Wagenvoort JH, De Brauwer EI, Penders RJ, van der Linden CJ, Willems RJ, Top J, Bonten MJ.

Eur J Clin Microbiol Infect Dis. 2015 Sep;34(9):1901-3. doi: 10.1007/s10096-015-2430-x. Epub 2015 Jul 21.

PMID:
26194692
13.

Difficulties of interpretation of Zaire Ebola Virus PCR results and implication in the field.

Janvier F, Gorbatch S, Queval L, Top J, Vigier C, Cotte J, Foissaud V.

J Clin Virol. 2015 Jun;67:36-7. doi: 10.1016/j.jcv.2015.04.001. Epub 2015 Apr 3. No abstract available.

PMID:
25959155
14.

Conceptual quantum chemical analysis of bonding and noncovalent interactions in the formation of frustrated Lewis pairs.

Skara G, Pinter B, Top J, Geerlings P, De Proft F, De Vleeschouwer F.

Chemistry. 2015 Mar 27;21(14):5510-9. doi: 10.1002/chem.201405891. Epub 2015 Feb 18.

PMID:
25694108
15.

Expression of p53, Ki67, EcPV2- and EcPV3 DNA, and viral genes in relation to metastasis and outcome in equine penile and preputial squamous cell carcinoma.

van den Top JG, Harkema L, Lange C, Ensink JM, van de Lest CH, Barneveld A, van Weeren PR, Gröne A, Martens A.

Equine Vet J. 2015 Mar;47(2):188-95. doi: 10.1111/evj.12245. Epub 2014 May 4.

PMID:
24898479
16.

Multiple-locus variable number tandem repeat analysis typing of vancomycin-resistant Enterococcus faecium in Serbia.

Jovanović M, Top J, Majoor E, Zervos M, Tošić T, Stošović B, Lavadinović L, Willems R.

Infect Control Hosp Epidemiol. 2013 Dec;34(12):1337-9. doi: 10.1086/673990. No abstract available.

PMID:
24225630
17.

Expression of cyclo-oxygenases-1 and -2, and microsomal prostaglandin E synthase-1 in penile and preputial papillomas and squamous cell carcinomas in the horse.

van den Top JG, Harkema L, Ensink JM, Barneveld A, Martens A, van de Lest CH, van Weeren PR, Gröne A.

Equine Vet J. 2014 Sep;46(5):618-24. doi: 10.1111/evj.12144. Epub 2013 Dec 5.

PMID:
23879794
18.

The Enterococcus faecium enterococcal biofilm regulator, EbrB, regulates the esp operon and is implicated in biofilm formation and intestinal colonization.

Top J, Paganelli FL, Zhang X, van Schaik W, Leavis HL, van Luit-Asbroek M, van der Poll T, Leendertse M, Bonten MJ, Willems RJ.

PLoS One. 2013 May 31;8(5):e65224. doi: 10.1371/journal.pone.0065224. Print 2013.

19.

Functional genomic analysis of bile salt resistance in Enterococcus faecium.

Zhang X, Bierschenk D, Top J, Anastasiou I, Bonten MJ, Willems RJ, van Schaik W.

BMC Genomics. 2013 May 3;14:299. doi: 10.1186/1471-2164-14-299.

20.

Identification of a genetic determinant in clinical Enterococcus faecium strains that contributes to intestinal colonization during antibiotic treatment.

Zhang X, Top J, de Been M, Bierschenk D, Rogers M, Leendertse M, Bonten MJ, van der Poll T, Willems RJ, van Schaik W.

J Infect Dis. 2013 Jun 1;207(11):1780-6. doi: 10.1093/infdis/jit076. Epub 2013 Feb 27.

PMID:
23447698
21.

Restricted gene flow among hospital subpopulations of Enterococcus faecium.

Willems RJ, Top J, van Schaik W, Leavis H, Bonten M, Sirén J, Hanage WP, Corander J.

MBio. 2012 Jul 17;3(4):e00151-12. doi: 10.1128/mBio.00151-12. Print 2012.

22.

Dynamics of ampicillin-resistant Enterococcus faecium clones colonizing hospitalized patients: data from a prospective observational study.

Weisser M, Oostdijk EA, Willems RJ, Bonten MJ, Frei R, Elzi L, Halter J, Widmer AF, Top J.

BMC Infect Dis. 2012 Mar 22;12:68. doi: 10.1186/1471-2334-12-68.

23.

Intra- and interspecies genomic transfer of the Enterococcus faecalis pathogenicity island.

Laverde Gomez JA, Hendrickx AP, Willems RJ, Top J, Sava I, Huebner J, Witte W, Werner G.

PLoS One. 2011 Apr 29;6(4):e16720. doi: 10.1371/journal.pone.0016720.

24.

Environmental survival of vancomycin-resistant Enterococcus faecium.

Wagenvoort JH, De Brauwer EI, Penders RJ, Willems RJ, Top J, Bonten MJ.

J Hosp Infect. 2011 Mar;77(3):282-3. doi: 10.1016/j.jhin.2010.11.008. Epub 2011 Feb 1. No abstract available.

PMID:
21288596
25.

The recombinase IntA is required for excision of esp-containing ICEEfm1 in Enterococcus faecium.

Top J, Sinnige JC, Majoor EA, Bonten MJ, Willems RJ, van Schaik W.

J Bacteriol. 2011 Feb;193(4):1003-6. doi: 10.1128/JB.00952-10. Epub 2010 Dec 10.

26.

Evaluation of the DiversiLab system for detection of hospital outbreaks of infections by different bacterial species.

Fluit AC, Terlingen AM, Andriessen L, Ikawaty R, van Mansfeld R, Top J, Cohen Stuart JW, Leverstein-van Hall MA, Boel CH.

J Clin Microbiol. 2010 Nov;48(11):3979-89. doi: 10.1128/JCM.01191-10. Epub 2010 Sep 22.

27.

Failure of vancomycin treatment for meningitis caused by vancomycin-susceptible Enterococcus faecium.

van Overbeek EC, Janknegt R, Ter Berg HW, Top J, Sportel E, Heddema ER.

Scand J Infect Dis. 2010 Oct;42(10):794-6. doi: 10.3109/00365548.2010.486003.

PMID:
20491535
28.

Pyrosequencing-based comparative genome analysis of the nosocomial pathogen Enterococcus faecium and identification of a large transferable pathogenicity island.

van Schaik W, Top J, Riley DR, Boekhorst J, Vrijenhoek JE, Schapendonk CM, Hendrickx AP, Nijman IJ, Bonten MJ, Tettelin H, Willems RJ.

BMC Genomics. 2010 Apr 14;11:239. doi: 10.1186/1471-2164-11-239.

29.

Effects of reducing beta-lactam antibiotic pressure on intestinal colonization of antibiotic-resistant gram-negative bacteria.

Nijssen S, Fluit A, van de Vijver D, Top J, Willems R, Bonten MJ.

Intensive Care Med. 2010 Mar;36(3):512-9. doi: 10.1007/s00134-009-1714-y.

30.

Frequent occurrence of multidrug-resistant CC17 Enterococcus faecium among clinical isolates in Sweden.

Billström H, Top J, Edlund C, Lund B.

J Appl Microbiol. 2010 May;108(5):1810-6. doi: 10.1111/j.1365-2672.2009.04585.x. Epub 2009 Oct 12.

31.

Comparison of two chromogenic media for selective isolation of vancomycin-resistant enterococci from stool specimens.

Peltroche-Llacsahuanga H, Top J, Weber-Heynemann J, Lütticken R, Haase G.

J Clin Microbiol. 2009 Dec;47(12):4113-6. doi: 10.1128/JCM.00882-09. Epub 2009 Oct 7.

32.

Intestinal colonization with Enterococcus faecium does not influence pulmonary defense against Pseudomonas aeruginosa in mice.

Leendertse M, Willems RJ, Giebelen IA, Roelofs JJ, Top J, Bonten MJ, van der Poll T.

PLoS One. 2009 Aug 27;4(8):e6775. doi: 10.1371/journal.pone.0006775.

33.

Spread without known selective pressure of a vancomycin-resistant clone of Enterococcus faecium among broilers.

Nilsson O, Greko C, Top J, Franklin A, Bengtsson B.

J Antimicrob Chemother. 2009 May;63(5):868-72. doi: 10.1093/jac/dkp045. Epub 2009 Feb 24.

PMID:
19240078
34.

Dogs are a reservoir of ampicillin-resistant Enterococcus faecium lineages associated with human infections.

Damborg P, Top J, Hendrickx AP, Dawson S, Willems RJ, Guardabassi L.

Appl Environ Microbiol. 2009 Apr;75(8):2360-5. doi: 10.1128/AEM.02035-08. Epub 2009 Feb 20.

35.

Emergence and spread of vancomycin resistance among enterococci in Europe.

Werner G, Coque TM, Hammerum AM, Hope R, Hryniewicz W, Johnson A, Klare I, Kristinsson KG, Leclercq R, Lester CH, Lillie M, Novais C, Olsson-Liljequist B, Peixe LV, Sadowy E, Simonsen GS, Top J, Vuopio-Varkila J, Willems RJ, Witte W, Woodford N.

Euro Surveill. 2008 Nov 20;13(47). pii: 19046. Review.

36.

High acquisition and environmental contamination rates of CC17 ampicillin-resistant Enterococcus faecium in a Dutch hospital.

de Regt MJ, van der Wagen LE, Top J, Blok HE, Hopmans TE, Dekker AW, Hené RJ, Siersema PD, Willems RJ, Bonten MJ.

J Antimicrob Chemother. 2008 Dec;62(6):1401-6. doi: 10.1093/jac/dkn390. Epub 2008 Sep 23.

PMID:
18812427
37.

Molecular characterization of vancomycin-resistant Enterococcus spp. clinical isolates from Hungary and Serbia.

Libisch B, Lepsanovic Z, Top J, Muzslay M, Konkoly-Thege M, Gacs M, Balogh B, Füzi M, Willems RJ.

Scand J Infect Dis. 2008;40(10):778-84. doi: 10.1080/00365540802165740.

PMID:
18609203
38.

Penile and preputial squamous cell carcinoma in the horse: a retrospective study of treatment of 77 affected horses.

van den Top JG, de Heer N, Klein WR, Ensink JM.

Equine Vet J. 2008 Sep;40(6):533-7. doi: 10.2746/042516408X281171.

PMID:
18487102
39.

Penile and preputial tumours in the horse: a retrospective study of 114 affected horses.

van den Top JG, de Heer N, Klein WR, Ensink JM.

Equine Vet J. 2008 Sep;40(6):528-32. doi: 10.2746/042516408X281180.

PMID:
18487101
40.

Emergence of CC17 Enterococcus faecium: from commensal to hospital-adapted pathogen.

Top J, Willems R, Bonten M.

FEMS Immunol Med Microbiol. 2008 Apr;52(3):297-308. doi: 10.1111/j.1574-695X.2008.00383.x. Epub 2008 Feb 14. Review.

41.

Comparison of multiple-locus variable-number tandem repeat analysis and pulsed-field gel electrophoresis in a setting of polyclonal endemicity of vancomycin-resistant Enterococcus faecium.

Top J, Banga NM, Hayes R, Willems RJ, Bonten MJ, Hayden MK.

Clin Microbiol Infect. 2008 Apr;14(4):363-9. doi: 10.1111/j.1469-0691.2007.01945.x. Epub 2008 Feb 2.

42.

Emergence of clonal complex 17 Enterococcus faecium in The Netherlands.

Top J, Willems R, van der Velden S, Asbroek M, Bonten M.

J Clin Microbiol. 2008 Jan;46(1):214-9. Epub 2007 Oct 31.

43.

Ecological replacement of Enterococcus faecalis by multiresistant clonal complex 17 Enterococcus faecium.

Top J, Willems R, Blok H, de Regt M, Jalink K, Troelstra A, Goorhuis B, Bonten M.

Clin Microbiol Infect. 2007 Mar;13(3):316-9.

44.

Growth condition-dependent Esp expression by Enterococcus faecium affects initial adherence and biofilm formation.

Van Wamel WJ, Hendrickx AP, Bonten MJ, Top J, Posthuma G, Willems RJ.

Infect Immun. 2007 Feb;75(2):924-31. Epub 2006 Nov 21.

45.

Multilocus sequence typing of hospital-associated Enterococcus faecium from Brazil reveals their unique evolutionary history.

Titze-de-Almeida R, Van Belkum A, Felipe MS, Zanella RC, Top J, Willems RJ.

Microb Drug Resist. 2006 Summer;12(2):121.

PMID:
16922628
46.

Multilocus sequence typing scheme for Enterococcus faecalis reveals hospital-adapted genetic complexes in a background of high rates of recombination.

Ruiz-Garbajosa P, Bonten MJ, Robinson DA, Top J, Nallapareddy SR, Torres C, Coque TM, Cantón R, Baquero F, Murray BE, del Campo R, Willems RJ.

J Clin Microbiol. 2006 Jun;44(6):2220-8.

48.

Population structure of Enterococcus faecium causing bacteremia in a Spanish university hospital: setting the scene for a future increase in vancomycin resistance?

Coque TM, Willems RJ, Fortún J, Top J, Diz S, Loza E, Cantón R, Baquero F.

Antimicrob Agents Chemother. 2005 Jul;49(7):2693-700.

49.

Global spread of vancomycin-resistant Enterococcus faecium from distinct nosocomial genetic complex.

Willems RJ, Top J, van Santen M, Robinson DA, Coque TM, Baquero F, Grundmann H, Bonten MJ.

Emerg Infect Dis. 2005 Jun;11(6):821-8.

50.

Unnoticed spread of integron-carrying Enterobacteriaceae in intensive care units.

Nijssen S, Florijn A, Top J, Willems R, Fluit A, Bonten M.

Clin Infect Dis. 2005 Jul 1;41(1):1-9. Epub 2005 May 26.

PMID:
15937755

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