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Items: 1 to 50 of 57

1.

Microbiome and Blood Analyte Differences Point to Community and Metabolic Signatures in Lean and Obese Horses.

Biddle AS, Tomb JF, Fan Z.

Front Vet Sci. 2018 Sep 20;5:225. doi: 10.3389/fvets.2018.00225. eCollection 2018.

2.

The Omics Dashboard for interactive exploration of gene-expression data.

Paley S, Parker K, Spaulding A, Tomb JF, O'Maille P, Karp PD.

Nucleic Acids Res. 2017 Dec 1;45(21):12113-12124. doi: 10.1093/nar/gkx910.

3.

CBFA: phenotype prediction integrating metabolic models with constraints derived from experimental data.

Carreira R, Evangelista P, Maia P, Vilaça P, Pont M, Tomb JF, Rocha I, Rocha M.

BMC Syst Biol. 2014 Dec 3;8:123. doi: 10.1186/s12918-014-0123-1.

4.

An integrated computational environment for elementary modes analysis of biochemical networks.

Maia P, Vilaça P, Rocha I, Pont M, Tomb JF, Rocha M.

Int J Data Min Bioinform. 2012;6(4):382-95.

PMID:
23155769
5.

Electron transport in acetate-grown Methanosarcina acetivorans.

Wang M, Tomb JF, Ferry JG.

BMC Microbiol. 2011 Jul 24;11:165. doi: 10.1186/1471-2180-11-165.

6.

Characterization of CamH from Methanosarcina thermophila, founding member of a subclass of the {gamma} class of carbonic anhydrases.

Zimmerman SA, Tomb JF, Ferry JG.

J Bacteriol. 2010 Mar;192(5):1353-60. doi: 10.1128/JB.01164-09. Epub 2009 Dec 18.

7.

Characterizing microbial diversity in production water from an Alaskan mesothermic petroleum reservoir with two independent molecular methods.

Pham VD, Hnatow LL, Zhang S, Fallon RD, Jackson SC, Tomb JF, DeLong EF, Keeler SJ.

Environ Microbiol. 2009 Jan;11(1):176-87. doi: 10.1111/j.1462-2920.2008.01751.x. Epub 2008 Sep 2.

PMID:
18771500
8.

TraA is required for megaplasmid conjugation in Rhodococcus erythropolis AN12.

Yang JC, Lessard PA, Sengupta N, Windsor SD, O'brien XM, Bramucci M, Tomb JF, Nagarajan V, Sinskey AJ.

Plasmid. 2007 Jan;57(1):55-70. Epub 2006 Sep 25.

PMID:
16997374
9.

Identification of bifunctional delta12/omega3 fatty acid desaturases for improving the ratio of omega3 to omega6 fatty acids in microbes and plants.

Damude HG, Zhang H, Farrall L, Ripp KG, Tomb JF, Hollerbach D, Yadav NS.

Proc Natl Acad Sci U S A. 2006 Jun 20;103(25):9446-51. Epub 2006 Jun 8.

10.

A small cryptic plasmid from Rhodococcus erythropolis: characterization and utility for gene expression.

Kostichka K, Tao L, Bramucci M, Tomb JF, Nagarajan V, Cheng Q.

Appl Microbiol Biotechnol. 2003 Jul;62(1):61-8. Epub 2003 Mar 11.

PMID:
12835922
12.

The genome of the natural genetic engineer Agrobacterium tumefaciens C58.

Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF Jr, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D Sr, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW.

Science. 2001 Dec 14;294(5550):2317-23.

13.

Skewed oligomers and origins of replication.

Salzberg SL, Salzberg AJ, Kerlavage AR, Tomb JF.

Gene. 1998 Sep 14;217(1-2):57-67.

PMID:
9795135
14.

A new transformation-deficient mutant of Haemophilus influenzae Rd with normal DNA uptake.

Gwinn ML, Ramanathan R, Smith HO, Tomb JF.

J Bacteriol. 1998 Feb;180(3):746-8.

15.

A panoramic view of bacterial transcription.

Tomb JF.

Nat Biotechnol. 1998 Jan;16(1):23. No abstract available.

PMID:
9447586
16.

Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi.

Fraser CM, Casjens S, Huang WM, Sutton GG, Clayton R, Lathigra R, White O, Ketchum KA, Dodson R, Hickey EK, Gwinn M, Dougherty B, Tomb JF, Fleischmann RD, Richardson D, Peterson J, Kerlavage AR, Quackenbush J, Salzberg S, Hanson M, van Vugt R, Palmer N, Adams MD, Gocayne J, Weidman J, Utterback T, Watthey L, McDonald L, Artiach P, Bowman C, Garland S, Fuji C, Cotton MD, Horst K, Roberts K, Hatch B, Smith HO, Venter JC.

Nature. 1997 Dec 11;390(6660):580-6.

PMID:
9403685
17.

In vitro Tn7 mutagenesis of Haemophilus influenzae Rd and characterization of the role of atpA in transformation.

Gwinn ML, Stellwagen AE, Craig NL, Tomb JF, Smith HO.

J Bacteriol. 1997 Dec;179(23):7315-20.

18.

The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.

Klenk HP, Clayton RA, Tomb JF, White O, Nelson KE, Ketchum KA, Dodson RJ, Gwinn M, Hickey EK, Peterson JD, Richardson DL, Kerlavage AR, Graham DE, Kyrpides NC, Fleischmann RD, Quackenbush J, Lee NH, Sutton GG, Gill S, Kirkness EF, Dougherty BA, McKenney K, Adams MD, Loftus B, Peterson S, Reich CI, McNeil LK, Badger JH, Glodek A, Zhou L, Overbeek R, Gocayne JD, Weidman JF, McDonald L, Utterback T, Cotton MD, Spriggs T, Artiach P, Kaine BP, Sykes SM, Sadow PW, D'Andrea KP, Bowman C, Fujii C, Garland SA, Mason TM, Olsen GJ, Fraser CM, Smith HO, Woese CR, Venter JC.

Nature. 1997 Nov 27;390(6658):364-70. Erratum in: Nature 1998 Jul 2;394(6688):101.

PMID:
9389475
19.

The complete genome sequence of the gastric pathogen Helicobacter pylori.

Tomb JF, White O, Kerlavage AR, Clayton RA, Sutton GG, Fleischmann RD, Ketchum KA, Klenk HP, Gill S, Dougherty BA, Nelson K, Quackenbush J, Zhou L, Kirkness EF, Peterson S, Loftus B, Richardson D, Dodson R, Khalak HG, Glodek A, McKenney K, Fitzegerald LM, Lee N, Adams MD, Hickey EK, Berg DE, Gocayne JD, Utterback TR, Peterson JD, Kelley JM, Cotton MD, Weidman JM, Fujii C, Bowman C, Watthey L, Wallin E, Hayes WS, Borodovsky M, Karp PD, Smith HO, Fraser CM, Venter JC.

Nature. 1997 Aug 7;388(6642):539-47. Erratum in: Nature 1997 Sep 25;389(6649):412.

PMID:
9252185
20.
21.

Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.

Bult CJ, White O, Olsen GJ, Zhou L, Fleischmann RD, Sutton GG, Blake JA, FitzGerald LM, Clayton RA, Gocayne JD, Kerlavage AR, Dougherty BA, Tomb JF, Adams MD, Reich CI, Overbeek R, Kirkness EF, Weinstock KG, Merrick JM, Glodek A, Scott JL, Geoghagen NS, Venter JC.

Science. 1996 Aug 23;273(5278):1058-73.

PMID:
8688087
22.

The minimal gene complement of Mycoplasma genitalium.

Fraser CM, Gocayne JD, White O, Adams MD, Clayton RA, Fleischmann RD, Bult CJ, Kerlavage AR, Sutton G, Kelley JM, Fritchman RD, Weidman JF, Small KV, Sandusky M, Fuhrmann J, Nguyen D, Utterback TR, Saudek DM, Phillips CA, Merrick JM, Tomb JF, Dougherty BA, Bott KF, Hu PC, Lucier TS, Peterson SN, Smith HO, Hutchison CA 3rd, Venter JC.

Science. 1995 Oct 20;270(5235):397-403.

PMID:
7569993
23.

Frequency and distribution of DNA uptake signal sequences in the Haemophilus influenzae Rd genome.

Smith HO, Tomb JF, Dougherty BA, Fleischmann RD, Venter JC.

Science. 1995 Jul 28;269(5223):538-40.

PMID:
7542802
24.

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.

Fleischmann RD, Adams MD, White O, Clayton RA, Kirkness EF, Kerlavage AR, Bult CJ, Tomb JF, Dougherty BA, Merrick JM, et al.

Science. 1995 Jul 28;269(5223):496-512.

PMID:
7542800
25.
26.
27.

Genetic systems in Haemophilus influenzae.

Barcak GJ, Chandler MS, Redfield RJ, Tomb JF.

Methods Enzymol. 1991;204:321-42. Review. No abstract available.

PMID:
1943781
28.

Regulating the 3'-5' activity of exonuclease III by varying the sodium chloride concentration.

Tomb JF, Barcak GJ.

Biotechniques. 1989 Oct;7(9):932-3. No abstract available.

PMID:
2631794
29.

Transposon mutagenesis, characterization, and cloning of transformation genes of Haemophilus influenzae Rd.

Tomb JF, Barcak GJ, Chandler MS, Redfield RJ, Smith HO.

J Bacteriol. 1989 Jul;171(7):3796-802.

30.

Two Haemophilus influenzae Rd genes that complement the recA-like mutation rec-1.

Barcak GJ, Tomb JF, Laufer CS, Smith HO.

J Bacteriol. 1989 May;171(5):2451-7.

31.

Vitreous histocytology of primary choroidal malignant melanoma.

Traboulsi EI, Jalkh AE, Frangieh GT, Tomb J.

Ann Ophthalmol. 1987 Feb;19(2):45-7.

PMID:
3566022
32.

Diagnosis of pulmonary hydatidosis by sputum cytology.

Tomb JA, Matossian RM.

Johns Hopkins Med J. 1976 Dec;139 SUPPL:38-40.

PMID:
1011405
33.

Prevention and early detection of cancer.

Tomb J.

J Med Liban. 1975;28(1):117-22. No abstract available.

PMID:
1206677
34.

A cytopathological study on serous fluid in cancer.

Tomb J.

J Med Liban. 1974;27(1):51-8. No abstract available.

PMID:
4846086
35.

Presacral ganglioneuroblastoma: cytological diagnosis, surgical approach and biochemical properties.

Mishalany H, Tomb J.

J Med Liban. 1971;24(3):279-86. No abstract available.

PMID:
5151410
36.

Transbronchial and transthoracic biopsy of pulmonary lesions.

Rizk GK, Tomb J.

J Med Liban. 1971;24(4):421-6. No abstract available.

PMID:
5146637
37.

Cyto-analysis in suspected cases of cancer of the lung.

Tomb J.

J Med Liban. 1971;24(2):135-42. No abstract available.

PMID:
5115896
38.

Pulmonary cytology and mass screening.

Tomb J.

J Med Liban. 1970;23(6):603-4. No abstract available.

PMID:
5519396
39.

Cancer of the cervix--early detection--effective control.

Tomb J.

J Med Liban. 1970;23(4):383-9. No abstract available.

PMID:
5473315
40.

[THE SERUM LACTIC DEHYDROGENASE ACTIVITY OF THE RAT DURING THE FORMATION OF A HEPATOMA INDUCED BY DIMETHYLAMINOAZOBENZENE (DAB)].

TOMB J, DELMON G, BIRABEN J.

C R Seances Soc Biol Fil. 1964;158:1877-80. French. No abstract available.

PMID:
14262531
41.

[SERUM LACTIC DEHYDROGENASE ACTIVITY IN THE RAT BEARING GUERIN CARCINOMA].

BIRABEN J, DELMON G, TOMB J.

C R Seances Soc Biol Fil. 1964;158:1488-90. French. No abstract available.

PMID:
14250557
42.

[INDUCED RAT HEPATOMAS AND TOXOHORMONE].

TOMB J, DELMON G, BIRABEN J.

C R Seances Soc Biol Fil. 1963 Nov 15;157:1268-9. French. No abstract available.

PMID:
14086557
43.

Alkaline acridine emulsions.

TOMB JW.

Australas J Pharm. 1948 Mar 30;29(339):208. No abstract available.

PMID:
18866980
44.

General anaesthesia and surgical shock.

TOMB JW.

Br Med J. 1948 Jan 17;1(4541):123. No abstract available.

45.

Yaws and syphilis.

TOMB JW.

Trans R Soc Trop Med Hyg. 1947 Jul;40(6):909. No abstract available.

PMID:
20262314
46.

Fainting and shock.

TOMB JW.

N Z Med J. 1947 Apr;46(252):131-4. No abstract available.

PMID:
20239280
47.

The Epidemiology of Cholera.

Tomb JW.

Ind Med Gaz. 1939 Aug;74(8):508. No abstract available.

48.

A Note on the Value of Medicinal Treatment in Cholera.

Tomb JW.

Ind Med Gaz. 1929 May;64(5):246-247. No abstract available.

49.

The Differential Diagnosis of Small-Pox and Chicken-Pox.

Tomb JW.

Ind Med Gaz. 1927 Nov;62(11):663. No abstract available.

50.

The Differential Diagnosis of Small-Pox and Chicken-Pox.

Tomb JW.

Ind Med Gaz. 1927 Apr;62(4):199-201. No abstract available.

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