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Items: 1 to 50 of 90

1.

Co-evolution in the Jungle: From Leafcutter Ant Colonies to Chromosomal Ends.

Tomáška Ľ, Nosek J.

J Mol Evol. 2020 Mar 10. doi: 10.1007/s00239-020-09935-3. [Epub ahead of print] Review.

PMID:
32157325
2.

Quantitative Proteomics Reveal Peroxiredoxin Perturbation Upon Persistent Lymphocytic Choriomeningitis Virus Infection in Human Cells.

Benej M, Danchenko M, Oveckova I, Cervenak F, Tomaska L, Grossmannova K, Polcicova K, Golias T, Tomaskova J.

Front Microbiol. 2019 Oct 25;10:2438. doi: 10.3389/fmicb.2019.02438. eCollection 2019.

3.

Identification of telomerase RNAs in species of the Yarrowia clade provides insights into the co-evolution of telomerase, telomeric repeats and telomere-binding proteins.

Červenák F, Juríková K, Devillers H, Kaffe B, Khatib A, Bonnell E, Sopkovičová M, Wellinger RJ, Nosek J, Tzfati Y, Neuvéglise C, Tomáška Ľ.

Sci Rep. 2019 Sep 16;9(1):13365. doi: 10.1038/s41598-019-49628-6.

4.

A New View of the T-Loop Junction: Implications for Self-Primed Telomere Extension, Expansion of Disease-Related Nucleotide Repeat Blocks, and Telomere Evolution.

Tomaska L, Nosek J, Kar A, Willcox S, Griffith JD.

Front Genet. 2019 Aug 14;10:792. doi: 10.3389/fgene.2019.00792. eCollection 2019.

5.

Genome Sequence of an Arthroconidial Yeast, Saprochaete fungicola CBS 625.85.

Brejová B, Lichancová H, Hodorová V, Neboháčová M, Tomáška Ľ, Vinař T, Nosek J.

Microbiol Resour Announc. 2019 Apr 11;8(15). pii: e00092-19. doi: 10.1128/MRA.00092-19.

6.

Commentary: Single-stranded telomere-binding protein employs a dual rheostat for binding affinity and specificity that drives function.

Tomáška Ĺ, Nosek J, Sepšiová R, Červenák F, Juríková K, Procházková K, Neboháčová M, Willcox S, Griffith JD.

Front Genet. 2019 Jan 15;9:742. doi: 10.3389/fgene.2018.00742. eCollection 2018. No abstract available.

7.

Genome sequence of the opportunistic human pathogen Magnusiomyces capitatus.

Brejová B, Lichancová H, Brázdovič F, Hegedűsová E, Forgáčová Jakúbková M, Hodorová V, Džugasová V, Baláž A, Zeiselová L, Cillingová A, Neboháčová M, Raclavský V, Tomáška Ľ, Lang BF, Vinař T, Nosek J.

Curr Genet. 2019 Apr;65(2):539-560. doi: 10.1007/s00294-018-0904-y. Epub 2018 Nov 19.

PMID:
30456648
8.

Ten simple rules for writing a cover letter to accompany a job application for an academic position.

Tomaska L, Nosek J.

PLoS Comput Biol. 2018 May 31;14(5):e1006132. doi: 10.1371/journal.pcbi.1006132. eCollection 2018 May. No abstract available.

9.

Draft Genome Sequence of an Obligate Psychrophilic Yeast, Candida psychrophila NRRL Y-17665T.

Brejová B, Lichancová H, Brázdovič F, Cillingová A, Neboháčová M, Tomáška Ľ, Vinař T, Nosek J.

Genome Announc. 2017 Aug 31;5(35). pii: e00851-17. doi: 10.1128/genomeA.00851-17.

10.

Intentionally flawed manuscripts as means for teaching students to critically evaluate scientific papers.

Ferenc J, Červenák F, Birčák E, Juríková K, Goffová I, Gorilák P, Huraiová B, Plavá J, Demecsová L, Ďuríková N, Galisová V, Gazdarica M, Puškár M, Nagy T, Nagyová S, Mentelová L, Slaninová M, Ševčovicová A, Tomáška Ľ.

Biochem Mol Biol Educ. 2018 Jan;46(1):22-30. doi: 10.1002/bmb.21084. Epub 2017 Aug 31.

11.

Eukaryotic transporters for hydroxyderivatives of benzoic acid.

Cillingová A, Zeman I, Tóth R, Neboháčová M, Dunčková I, Hölcová M, Jakúbková M, Gérecová G, Pryszcz LP, Tomáška Ľ, Gabaldón T, Gácser A, Nosek J.

Sci Rep. 2017 Aug 21;7(1):8998. doi: 10.1038/s41598-017-09408-6.

12.

Double-stranded telomeric DNA binding proteins: Diversity matters.

Červenák F, Juríková K, Sepšiová R, Neboháčová M, Nosek J, Tomáška L.

Cell Cycle. 2017;16(17):1568-1577. doi: 10.1080/15384101.2017.1356511. Epub 2017 Jul 27. Review.

13.

Structure of a Stable G-Hairpin.

Gajarský M, Živković ML, Stadlbauer P, Pagano B, Fiala R, Amato J, Tomáška L, Šponer J, Plavec J, Trantírek L.

J Am Chem Soc. 2017 Mar 15;139(10):3591-3594. doi: 10.1021/jacs.6b10786. Epub 2017 Mar 2.

PMID:
28217994
14.

Mitochondrial Carriers Link the Catabolism of Hydroxyaromatic Compounds to the Central Metabolism in Candida parapsilosis.

Zeman I, Neboháčová M, Gérecová G, Katonová K, Jánošíková E, Jakúbková M, Centárová I, Dunčková I, Tomáška L, Pryszcz LP, Gabaldón T, Nosek J.

G3 (Bethesda). 2016 Dec 7;6(12):4047-4058. doi: 10.1534/g3.116.034389.

15.

Mgm101: A double-duty Rad52-like protein.

Rendeková J, Ward TA, Šimoničová L, Thomas PH, Nosek J, Tomáška Ľ, McHugh PJ, Chovanec M.

Cell Cycle. 2016 Dec;15(23):3169-3176. Epub 2016 Sep 16.

16.

Identification of Yeast Mutants Exhibiting Altered Sensitivity to Valinomycin and Nigericin Demonstrate Pleiotropic Effects of Ionophores on Cellular Processes.

Jakubkova M, Dzugasova V, Truban D, Abelovska L, Bhatia-Kissova I, Valachovic M, Klobucnikova V, Zeiselova L, Griac P, Nosek J, Tomaska L.

PLoS One. 2016 Oct 6;11(10):e0164175. doi: 10.1371/journal.pone.0164175. eCollection 2016.

17.

Evolution of Telomeres in Schizosaccharomyces pombe and Its Possible Relationship to the Diversification of Telomere Binding Proteins.

Sepsiova R, Necasova I, Willcox S, Prochazkova K, Gorilak P, Nosek J, Hofr C, Griffith JD, Tomaska L.

PLoS One. 2016 Apr 21;11(4):e0154225. doi: 10.1371/journal.pone.0154225. eCollection 2016.

18.

How to bake a brain: yeast as a model neuron.

Sarto-Jackson I, Tomaska L.

Curr Genet. 2016 May;62(2):347-70. doi: 10.1007/s00294-015-0554-2. Epub 2016 Jan 18. Review.

PMID:
26782173
19.

The structure and DNA-binding properties of Mgm101 from a yeast with a linear mitochondrial genome.

Pevala V, Truban D, Bauer JA, Košťan J, Kunová N, Bellová J, Brandstetter M, Marini V, Krejčí L, Tomáška Ľ, Nosek J, Kutejová E.

Nucleic Acids Res. 2016 Mar 18;44(5):2227-39. doi: 10.1093/nar/gkv1529. Epub 2016 Jan 6.

20.

Yeast mitochondrial HMG proteins: DNA-binding properties of the most evolutionarily divergent component of mitochondrial nucleoids.

Bakkaiova J, Marini V, Willcox S, Nosek J, Griffith JD, Krejci L, Tomaska L.

Biosci Rep. 2015 Dec 8;36(1):e00288. doi: 10.1042/BSR20150275.

21.

Programmed translational bypassing elements in mitochondria: structure, mobility, and evolutionary origin.

Nosek J, Tomaska L, Burger G, Lang BF.

Trends Genet. 2015 Apr;31(4):187-94. doi: 10.1016/j.tig.2015.02.010. Epub 2015 Mar 17. Review.

PMID:
25795412
22.

Metabolic gene clusters encoding the enzymes of two branches of the 3-oxoadipate pathway in the pathogenic yeast Candida albicans.

Gérecová G, Neboháčová M, Zeman I, Pryszcz LP, Tomáška Ľ, Gabaldón T, Nosek J.

FEMS Yeast Res. 2015 May;15(3). pii: fov006. doi: 10.1093/femsyr/fov006. Epub 2015 Mar 4.

PMID:
25743787
23.

Saccharomyces cerevisiae as a model for the study of extranuclear functions of mammalian telomerase.

Simonicova L, Dudekova H, Ferenc J, Prochazkova K, Nebohacova M, Dusinsky R, Nosek J, Tomaska L.

Curr Genet. 2015 Nov;61(4):517-27. doi: 10.1007/s00294-014-0472-8. Epub 2015 Jan 8.

24.

Correction for Bakkaiova et al., The strictly aerobic yeast Yarrowia lipolytica tolerates loss of a mitochondrial DNA-packaging protein.

Bakkaiova J, Arata K, Matsunobu M, Ono B, Aoki T, Lajdova D, Nebohacova M, Nosek J, Miyakawa I, Tomaska L.

Eukaryot Cell. 2015 Jan;14(1):113. doi: 10.1128/EC.00246-14. No abstract available.

25.

Mdm31 protein mediates sensitivity to potassium ionophores but does not regulate mitochondrial morphology or phospholipid trafficking in Schizosaccharomyces pombe.

Ivan B, Lajdova D, Abelovska L, Balazova M, Nosek J, Tomaska L.

Yeast. 2015 Mar;32(3):345-54. doi: 10.1002/yea.3062. Epub 2015 Jan 7.

26.

The strictly aerobic yeast Yarrowia lipolytica tolerates loss of a mitochondrial DNA-packaging protein.

Bakkaiova J, Arata K, Matsunobu M, Ono B, Aoki T, Lajdova D, Nebohacova M, Nosek J, Miyakawa I, Tomaska L.

Eukaryot Cell. 2014 Sep;13(9):1143-57. doi: 10.1128/EC.00092-14. Epub 2014 Jun 27. Erratum in: Eukaryot Cell. 2015 Jan;14(1):113.

27.

Replication intermediates of the linear mitochondrial DNA of Candida parapsilosis suggest a common recombination based mechanism for yeast mitochondria.

Gerhold JM, Sedman T, Visacka K, Slezakova J, Tomaska L, Nosek J, Sedman J.

J Biol Chem. 2014 Aug 15;289(33):22659-70. doi: 10.1074/jbc.M114.552828. Epub 2014 Jun 20.

28.

Mathematical model of alternative mechanism of telomere length maintenance.

Kollár R, Bod'ová K, Nosek J, Tomáška L.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Mar;89(3):032701. Epub 2014 Mar 4.

PMID:
24730869
29.

Massive programmed translational jumping in mitochondria.

Lang BF, Jakubkova M, Hegedusova E, Daoud R, Forget L, Brejova B, Vinar T, Kosa P, Fricova D, Nebohacova M, Griac P, Tomaska L, Burger G, Nosek J.

Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):5926-31. doi: 10.1073/pnas.1322190111. Epub 2014 Apr 7.

30.

Timing of meiosis: microtubules on the move.

Nosek J, Tomaska L.

Cell Cycle. 2014;13(1):13. doi: 10.4161/cc.27298. Epub 2013 Nov 22. No abstract available.

31.

Mitochondrial genome of the basidiomycetous yeast Jaminaea angkorensis.

Hegedusova E, Brejova B, Tomaska L, Sipiczki M, Nosek J.

Curr Genet. 2014 Feb;60(1):49-59. doi: 10.1007/s00294-013-0410-1. Epub 2013 Sep 27.

PMID:
24071901
32.

Yeast membranes and cell wall: from basics to applications.

Hapala I, Griač P, Nosek J, Sychrová H, Tomáška L.

Curr Genet. 2013 Nov;59(4):167-9. doi: 10.1007/s00294-013-0408-8. Epub 2013 Sep 22. No abstract available.

PMID:
24057126
33.

Mitochondrial genome variability within the Candida parapsilosis species complex.

Valach M, Pryszcz LP, Tomaska L, Gacser A, Gabaldón T, Nosek J.

Mitochondrion. 2012 Sep;12(5):514-9. doi: 10.1016/j.mito.2012.07.109. Epub 2012 Jul 21.

PMID:
22824459
34.

Synergism of the two Myb domains of Tay1 protein results in high affinity binding to telomeres.

Visacka K, Hofr C, Willcox S, Necasova I, Pavlouskova J, Sepsiova R, Wimmerova M, Simonicova L, Nosek J, Fajkus J, Griffith JD, Tomaska L.

J Biol Chem. 2012 Sep 14;287(38):32206-15. doi: 10.1074/jbc.M112.385591. Epub 2012 Jul 18.

35.

A new tool for an old problem: synchronizing fission yeast cells during meiosis using an ATP analog-sensitive protein kinase.

Nosek J, Tomáska L.

Cell Cycle. 2012 May 1;11(9):1755-6. doi: 10.4161/cc.20314. Epub 2012 May 1. No abstract available.

36.

Training biology's new romantics. The challenge of educating young biologists to keep up with the pace of modern molecular biology.

Tomaska L.

EMBO Rep. 2011 May;12(5):398-400. doi: 10.1038/embor.2011.56. Epub 2011 Apr 8. No abstract available.

37.

Gentisate and 3-oxoadipate pathways in the yeast Candida parapsilosis: identification and functional analysis of the genes coding for 3-hydroxybenzoate 6-hydroxylase and 4-hydroxybenzoate 1-hydroxylase.

Holesova Z, Jakubkova M, Zavadiakova I, Zeman I, Tomaska L, Nosek J.

Microbiology. 2011 Jul;157(Pt 7):2152-2163. doi: 10.1099/mic.0.048215-0. Epub 2011 Apr 7.

PMID:
21474535
38.

Evolution of linear chromosomes and multipartite genomes in yeast mitochondria.

Valach M, Farkas Z, Fricova D, Kovac J, Brejova B, Vinar T, Pfeiffer I, Kucsera J, Tomaska L, Lang BF, Nosek J.

Nucleic Acids Res. 2011 May;39(10):4202-19. doi: 10.1093/nar/gkq1345. Epub 2011 Jan 25.

39.

Tay1 protein, a novel telomere binding factor from Yarrowia lipolytica.

Kramara J, Willcox S, Gunisova S, Kinsky S, Nosek J, Griffith JD, Tomaska L.

J Biol Chem. 2010 Dec 3;285(49):38078-92. doi: 10.1074/jbc.M110.127605. Epub 2010 Oct 5.

40.

Filling out the gaps is the hardest (yet rewarding) task: the genome-wide collection of the fission yeast deletion mutants is near completion.

Tomáska L, Nosek J.

Cell Cycle. 2010 Jun 15;9(12):2274. Epub 2010 Jun 15. No abstract available.

PMID:
20581441
41.

Lack of the catalytic subunit of telomerase leads to growth defects accompanied by structural changes at the chromosomal ends in Yarrowia lipolytica.

Kinsky S, Mihalikova A, Kramara J, Nosek J, Tomaska L.

Curr Genet. 2010 Oct;56(5):413-25. doi: 10.1007/s00294-010-0310-6. Epub 2010 Jun 15.

PMID:
20549213
42.

The mitochondrial genome of the pathogenic yeast Candida subhashii: GC-rich linear DNA with a protein covalently attached to the 5' termini.

Fricova D, Valach M, Farkas Z, Pfeiffer I, Kucsera J, Tomaska L, Nosek J.

Microbiology. 2010 Jul;156(Pt 7):2153-2163. doi: 10.1099/mic.0.038646-0. Epub 2010 Apr 15.

43.

Formation of C-terminally truncated version of the Taz1 protein employs cleavage-box structure in mRNA.

Gunisova S, Bartosova Z, Kramara J, Nosek J, Tomaska L.

Biochem Biophys Res Commun. 2010 Feb 12;392(3):391-6. doi: 10.1016/j.bbrc.2010.01.033. Epub 2010 Jan 13.

44.

Telomeric circles: universal players in telomere maintenance?

Tomaska L, Nosek J, Kramara J, Griffith JD.

Nat Struct Mol Biol. 2009 Oct;16(10):1010-5. doi: 10.1038/nsmb.1660. Epub 2009 Oct 6.

45.

Biology and genetics of the pathogenic yeast Candida parapsilosis.

Nosek J, Holesova Z, Kosa P, Gacser A, Tomaska L.

Curr Genet. 2009 Oct;55(5):497-509. doi: 10.1007/s00294-009-0268-4. Epub 2009 Aug 7. Review.

PMID:
19662416
46.

Mitochondrial nucleoids from the yeast Candida parapsilosis: expansion of the repertoire of proteins associated with mitochondrial DNA.

Miyakawa I, Okamuro A, Kinsky S, Visacka K, Tomaska L, Nosek J.

Microbiology. 2009 May;155(Pt 5):1558-1568. doi: 10.1099/mic.0.027474-0. Epub 2009 Apr 21.

PMID:
19383705
47.

Novel subfamily of mitochondrial HMG box-containing proteins: functional analysis of Gcf1p from Candida albicans.

Visacka K, Gerhold JM, Petrovicova J, Kinsky S, Jõers P, Nosek J, Sedman J, Tomaska L.

Microbiology. 2009 Apr;155(Pt 4):1226-1240. doi: 10.1099/mic.0.025759-0.

48.

Telomere heterogeneity: taking advantage of stochastic events.

Tomaska L, Nosek J.

FEBS Lett. 2009 Apr 2;583(7):1067-71. doi: 10.1016/j.febslet.2009.02.032. Epub 2009 Mar 1. Review.

49.

Identification and comparative analysis of telomerase RNAs from Candida species reveal conservation of functional elements.

Gunisova S, Elboher E, Nosek J, Gorkovoy V, Brown Y, Lucier JF, Laterreur N, Wellinger RJ, Tzfati Y, Tomaska L.

RNA. 2009 Apr;15(4):546-59. doi: 10.1261/rna.1194009. Epub 2009 Feb 17.

50.

Preparation of yeast mitochondrial DNA for direct sequence analysis.

Valach M, Tomaska L, Nosek J.

Curr Genet. 2008 Aug;54(2):105-9. doi: 10.1007/s00294-008-0200-3. Epub 2008 Jun 21.

PMID:
18568348

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