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Items: 37

1.

Highly Heterogeneous Excitatory Connections Require Less Amount of Noise to Sustain Firing Activities in Cortical Networks.

Kada H, Teramae JN, Tokuda IT.

Front Comput Neurosci. 2018 Dec 21;12:104. doi: 10.3389/fncom.2018.00104. eCollection 2018.

2.

Reducing the complexity of mathematical models for the plant circadian clock by distributed delays.

Tokuda IT, Akman OE, Locke JCW.

J Theor Biol. 2019 Feb 21;463:155-166. doi: 10.1016/j.jtbi.2018.12.014. Epub 2018 Dec 12.

PMID:
30550861
3.

Coherency of circadian rhythms in the SCN is governed by the interplay of two coupling factors.

Tokuda IT, Ono D, Honma S, Honma KI, Herzel H.

PLoS Comput Biol. 2018 Dec 10;14(12):e1006607. doi: 10.1371/journal.pcbi.1006607. eCollection 2018 Dec.

4.

Photic phase-response curves for cycling female mice.

Mizuta S, Sugiyama M, Tokuda IT, Nakamura W, Nakamura TJ.

Horm Behav. 2018 Sep;105:41-46. doi: 10.1016/j.yhbeh.2018.07.008. Epub 2018 Jul 30.

PMID:
30031017
5.

Coordination of robust single cell rhythms in the Arabidopsis circadian clock via spatial waves of gene expression.

Gould PD, Domijan M, Greenwood M, Tokuda IT, Rees H, Kozma-Bognar L, Hall AJ, Locke JC.

Elife. 2018 Apr 26;7. pii: e31700. doi: 10.7554/eLife.31700.

6.

Characterization and detection of thermoacoustic combustion oscillations based on statistical complexity and complex-network theory.

Murayama S, Kinugawa H, Tokuda IT, Gotoda H.

Phys Rev E. 2018 Feb;97(2-1):022223. doi: 10.1103/PhysRevE.97.022223.

PMID:
29548163
7.

Nonlinear dynamics of a buoyancy-induced turbulent fire.

Takagi K, Gotoda H, Tokuda IT, Miyano T.

Phys Rev E. 2017 Nov;96(5-1):052223. doi: 10.1103/PhysRevE.96.052223. Epub 2017 Nov 28.

PMID:
29347727
8.

Salt-inducible kinase 3 regulates the mammalian circadian clock by destabilizing PER2 protein.

Hayasaka N, Hirano A, Miyoshi Y, Tokuda IT, Yoshitane H, Matsuda J, Fukada Y.

Elife. 2017 Dec 11;6. pii: e24779. doi: 10.7554/eLife.24779.

9.

Multicellularity enriches the entrainment of Arabidopsis circadian clock.

Masuda K, Kitaoka R, Ukai K, Tokuda IT, Fukuda H.

Sci Adv. 2017 Oct 4;3(10):e1700808. doi: 10.1126/sciadv.1700808. eCollection 2017 Oct.

10.

Effect of level difference between left and right vocal folds on phonation: Physical experiment and theoretical study.

Tokuda IT, Shimamura R.

J Acoust Soc Am. 2017 Aug;142(2):482. doi: 10.1121/1.4996105.

PMID:
28863607
11.

New insights into olivo-cerebellar circuits for learning from a small training sample.

Tokuda IT, Hoang H, Kawato M.

Curr Opin Neurobiol. 2017 Oct;46:58-67. doi: 10.1016/j.conb.2017.07.010. Epub 2017 Aug 19. Review.

PMID:
28841437
12.

Grasshopper mice employ distinct vocal production mechanisms in different social contexts.

Pasch B, Tokuda IT, Riede T.

Proc Biol Sci. 2017 Jul 26;284(1859). pii: 20171158. doi: 10.1098/rspb.2017.1158.

13.

Transition of phase response properties and singularity in the circadian limit cycle of cultured cells.

Koinuma S, Kori H, Tokuda IT, Yagita K, Shigeyoshi Y.

PLoS One. 2017 Jul 17;12(7):e0181223. doi: 10.1371/journal.pone.0181223. eCollection 2017.

14.

Potential contribution of tandem circadian enhancers to nonlinear oscillations in clock gene expression.

Tokuda IT, Okamoto A, Matsumura R, Takumi T, Akashi M.

Mol Biol Cell. 2017 Aug 15;28(17):2333-2342. doi: 10.1091/mbc.E17-02-0129. Epub 2017 Jun 21.

15.
16.

Coupling Controls the Synchrony of Clock Cells in Development and Knockouts.

Tokuda IT, Ono D, Ananthasubramaniam B, Honma S, Honma K, Herzel H.

Biophys J. 2015 Nov 17;109(10):2159-70. doi: 10.1016/j.bpj.2015.09.024.

17.

Age-Related Changes in the Circadian System Unmasked by Constant Conditions

Nakamura TJ, Nakamura W, Tokuda IT, Ishikawa T, Kudo T, Colwell CS, Block GD.

eNeuro. 2015 Sep 22;2(4). pii: ENEURO.0064-15.2015. doi: 10.1523/ENEURO.0064-15.2015. eCollection 2015 Jul-Aug.

18.

Recovery from Age-Related Infertility under Environmental Light-Dark Cycles Adjusted to the Intrinsic Circadian Period.

Takasu NN, Nakamura TJ, Tokuda IT, Todo T, Block GD, Nakamura W.

Cell Rep. 2015 Sep 1;12(9):1407-13. doi: 10.1016/j.celrep.2015.07.049. Epub 2015 Aug 20.

19.

An extended mathematical model for reproducing the phase response of Arabidopsis thaliana under various light conditions.

Ohara T, Fukuda H, Tokuda IT.

J Theor Biol. 2015 Oct 7;382:337-44. doi: 10.1016/j.jtbi.2015.07.016. Epub 2015 Jul 29.

PMID:
26231414
20.

The source-filter theory of whistle-like calls in marmosets: Acoustic analysis and simulation of helium-modulated voices.

Koda H, Tokuda IT, Wakita M, Ito T, Nishimura T.

J Acoust Soc Am. 2015 Jun;137(6):3068-76. doi: 10.1121/1.4921607.

PMID:
26093398
21.

Segmental Bayesian estimation of gap-junctional and inhibitory conductance of inferior olive neurons from spike trains with complicated dynamics.

Hoang H, Yamashita O, Tokuda IT, Sato MA, Kawato M, Toyama K.

Front Comput Neurosci. 2015 May 21;9:56. doi: 10.3389/fncom.2015.00056. eCollection 2015.

22.

Phase response of the Arabidopsis thaliana circadian clock to light pulses of different wavelengths.

Ohara T, Fukuda H, Tokuda IT.

J Biol Rhythms. 2015 Apr;30(2):95-103. doi: 10.1177/0748730415576426.

PMID:
25838417
23.

Functional morphology of the Alligator mississippiensis larynx with implications for vocal production.

Riede T, Li Z, Tokuda IT, Farmer CG.

J Exp Biol. 2015 Apr;218(Pt 7):991-8. doi: 10.1242/jeb.117101. Epub 2015 Feb 5.

24.

Estimation of inferior-superior vocal fold kinematics from high-speed stereo endoscopic data in vivo.

Sommer DE, Tokuda IT, Peterson SD, Sakakibara K, Imagawa H, Yamauchi A, Nito T, Yamasoba T, Tayama N.

J Acoust Soc Am. 2014 Dec;136(6):3290. doi: 10.1121/1.4900572.

PMID:
25480074
25.

Controlling circadian rhythms by dark-pulse perturbations in Arabidopsis thaliana.

Fukuda H, Murase H, Tokuda IT.

Sci Rep. 2013;3:1533. doi: 10.1038/srep01533.

26.

Solution to the inverse problem of estimating gap-junctional and inhibitory conductance in inferior olive neurons from spike trains by network model simulation.

Onizuka M, Hoang H, Kawato M, Tokuda IT, Schweighofer N, Katori Y, Aihara K, Lang EJ, Toyama K.

Neural Netw. 2013 Nov;47:51-63. doi: 10.1016/j.neunet.2013.01.006. Epub 2013 Feb 4.

PMID:
23428796
27.

Adaptive coupling of inferior olive neurons in cerebellar learning.

Tokuda IT, Hoang H, Schweighofer N, Kawato M.

Neural Netw. 2013 Nov;47:42-50. doi: 10.1016/j.neunet.2012.12.006. Epub 2012 Dec 28.

PMID:
23337637
28.

Circadian regulation of food-anticipatory activity in molecular clock-deficient mice.

Takasu NN, Kurosawa G, Tokuda IT, Mochizuki A, Todo T, Nakamura W.

PLoS One. 2012;7(11):e48892. doi: 10.1371/journal.pone.0048892. Epub 2012 Nov 7.

29.

Soprano singing in gibbons.

Koda H, Nishimura T, Tokuda IT, Oyakawa C, Nihonmatsu T, Masataka N.

Am J Phys Anthropol. 2012 Nov;149(3):347-55. doi: 10.1002/ajpa.22124. Epub 2012 Aug 24.

PMID:
22926979
30.

Subglottal pressure and fundamental frequency control in contact calls of juvenile Alligator mississippiensis.

Riede T, Tokuda IT, Farmer CG.

J Exp Biol. 2011 Sep 15;214(Pt 18):3082-95. doi: 10.1242/jeb.051110.

31.

The role of chaotic resonance in cerebellar learning.

Tokuda IT, Han CE, Aihara K, Kawato M, Schweighofer N.

Neural Netw. 2010 Sep;23(7):836-42. doi: 10.1016/j.neunet.2010.04.006. Epub 2010 May 5.

PMID:
20494551
32.

Biomechanical modeling of register transitions and the role of vocal tract resonators.

Tokuda IT, Zemke M, Kob M, Herzel H.

J Acoust Soc Am. 2010 Mar;127(3):1528-36. doi: 10.1121/1.3299201.

PMID:
20329853
33.

Mammalian laryngseal air sacs add variability to the vocal tract impedance: physical and computational modeling.

Riede T, Tokuda IT, Munger JB, Thomson SL.

J Acoust Soc Am. 2008 Jul;124(1):634-47. doi: 10.1121/1.2924125.

34.

Detecting anomalous phase synchronization from time series.

Tokuda IT, Kumar Dana S, Kurths J.

Chaos. 2008 Jun;18(2):023134. doi: 10.1063/1.2943308.

PMID:
18601500
35.

Bifurcations and chaos in register transitions of excised larynx experiments.

Tokuda IT, Horácek J, Svec JG, Herzel H.

Chaos. 2008 Mar;18(1):013102. doi: 10.1063/1.2825295.

PMID:
18377053
36.

Inferring phase equations from multivariate time series.

Tokuda IT, Jain S, Kiss IZ, Hudson JL.

Phys Rev Lett. 2007 Aug 10;99(6):064101. Epub 2007 Aug 8.

PMID:
17930830
37.

Comparison of biomechanical modeling of register transitions and voice instabilities with excised larynx experiments.

Tokuda IT, Horácek J, Svec JG, Herzel H.

J Acoust Soc Am. 2007 Jul;122(1):519-31.

PMID:
17614509

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