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Items: 21

1.

Preclinical Efficacy of the Novel Monocarboxylate Transporter 1 Inhibitor BAY-8002 and Associated Markers of Resistance.

Quanz M, Bender E, Kopitz C, Grünewald S, Schlicker A, Schwede W, Eheim A, Toschi L, Neuhaus R, Richter C, Toedling J, Merz C, Lesche R, Kamburov A, Siebeneicher H, Bauser M, Hägebarth A.

Mol Cancer Ther. 2018 Nov;17(11):2285-2296. doi: 10.1158/1535-7163.MCT-17-1253. Epub 2018 Aug 16.

PMID:
30115664
2.

Reactivating TP53 signaling by the novel MDM2 inhibitor DS-3032b as a therapeutic option for high-risk neuroblastoma.

Arnhold V, Schmelz K, Proba J, Winkler A, Wünschel J, Toedling J, Deubzer HE, Künkele A, Eggert A, Schulte JH, Hundsdoerfer P.

Oncotarget. 2017 Dec 18;9(2):2304-2319. doi: 10.18632/oncotarget.23409. eCollection 2018 Jan 5.

3.

Super-enhancers define a proliferative PGC-1α-expressing melanoma subgroup sensitive to BET inhibition.

Gelato KA, Schöckel L, Klingbeil O, Rückert T, Lesche R, Toedling J, Kalfon E, Héroult M, Lejeune P, Mönning U, Fernández-Montalván AE, Bäurle S, Siegel S, Haendler B.

Oncogene. 2018 Jan 25;37(4):512-521. doi: 10.1038/onc.2017.325. Epub 2017 Oct 9.

4.

ATAD2 is an epigenetic reader of newly synthesized histone marks during DNA replication.

Koo SJ, Fernández-Montalván AE, Badock V, Ott CJ, Holton SJ, von Ahsen O, Toedling J, Vittori S, Bradner JE, Gorjánácz M.

Oncotarget. 2016 Oct 25;7(43):70323-70335. doi: 10.18632/oncotarget.11855.

5.

JNK-dependent gene regulatory circuitry governs mesenchymal fate.

Sahu SK, Garding A, Tiwari N, Thakurela S, Toedling J, Gebhard S, Ortega F, Schmarowski N, Berninger B, Nitsch R, Schmidt M, Tiwari VK.

EMBO J. 2015 Aug 13;34(16):2162-81. doi: 10.15252/embj.201490693. Epub 2015 Jul 8.

6.

Multifaceted effects of oligodendroglial exosomes on neurons: impact on neuronal firing rate, signal transduction and gene regulation.

Fröhlich D, Kuo WP, Frühbeis C, Sun JJ, Zehendner CM, Luhmann HJ, Pinto S, Toedling J, Trotter J, Krämer-Albers EM.

Philos Trans R Soc Lond B Biol Sci. 2014 Sep 26;369(1652). pii: 20130510. doi: 10.1098/rstb.2013.0510.

7.

The intestinal microbiota interferes with the microRNA response upon oral Listeria infection.

Archambaud C, Sismeiro O, Toedling J, Soubigou G, Bécavin C, Lechat P, Lebreton A, Ciaudo C, Cossart P.

MBio. 2013 Dec 10;4(6):e00707-13. doi: 10.1128/mBio.00707-13.

8.

ncPRO-seq: a tool for annotation and profiling of ncRNAs in sRNA-seq data.

Chen CJ, Servant N, Toedling J, Sarazin A, Marchais A, Duvernois-Berthet E, Cognat V, Colot V, Voinnet O, Heard E, Ciaudo C, Barillot E.

Bioinformatics. 2012 Dec 1;28(23):3147-9. doi: 10.1093/bioinformatics/bts587. Epub 2012 Oct 7.

PMID:
23044543
9.

Deep-sequencing protocols influence the results obtained in small-RNA sequencing.

Toedling J, Servant N, Ciaudo C, Farinelli L, Voinnet O, Heard E, Barillot E.

PLoS One. 2012;7(2):e32724. doi: 10.1371/journal.pone.0032724. Epub 2012 Feb 27.

10.

Asf1b, the necessary Asf1 isoform for proliferation, is predictive of outcome in breast cancer.

Corpet A, De Koning L, Toedling J, Savignoni A, Berger F, Lemaître C, O'Sullivan RJ, Karlseder J, Barillot E, Asselain B, Sastre-Garau X, Almouzni G.

EMBO J. 2011 Feb 2;30(3):480-93. doi: 10.1038/emboj.2010.335. Epub 2010 Dec 21.

11.

Girafe--an R/Bioconductor package for functional exploration of aligned next-generation sequencing reads.

Toedling J, Ciaudo C, Voinnet O, Heard E, Barillot E.

Bioinformatics. 2010 Nov 15;26(22):2902-3. doi: 10.1093/bioinformatics/btq531. Epub 2010 Sep 21.

12.

High-resolution transcription atlas of the mitotic cell cycle in budding yeast.

Granovskaia MV, Jensen LJ, Ritchie ME, Toedling J, Ning Y, Bork P, Huber W, Steinmetz LM.

Genome Biol. 2010;11(3):R24. doi: 10.1186/gb-2010-11-3-r24. Epub 2010 Mar 1.

13.

Analyzing ChIP-chip data using bioconductor.

Toedling J, Huber W.

PLoS Comput Biol. 2008 Nov;4(11):e1000227. doi: 10.1371/journal.pcbi.1000227. Epub 2008 Nov 28. No abstract available.

14.

Combinatorial effects of four histone modifications in transcription and differentiation.

Fischer JJ, Toedling J, Krueger T, Schueler M, Huber W, Sperling S.

Genomics. 2008 Jan;91(1):41-51. Epub 2007 Nov 8.

15.

Ringo--an R/Bioconductor package for analyzing ChIP-chip readouts.

Toedling J, Skylar O, Krueger T, Fischer JJ, Sperling S, Huber W.

BMC Bioinformatics. 2007 Jun 26;8:221. Erratum in: BMC Bioinformatics. 2007;8:443. Sklyar, Oleg [corrected to Skylar, Oleg]; Krueger, Tammo [added]; Fischer, JJ [added]; Sperling, Silke [added].

16.

Annotation-based distance measures for patient subgroup discovery in clinical microarray studies.

Lottaz C, Toedling J, Spang R.

Bioinformatics. 2007 Sep 1;23(17):2256-64. Epub 2007 Jun 22.

PMID:
17586546
17.

Genomic organization of transcriptomes in mammals: Coregulation and cofunctionality.

Purmann A, Toedling J, Schueler M, Carninci P, Lehrach H, Hayashizaki Y, Huber W, Sperling S.

Genomics. 2007 May;89(5):580-7. Epub 2007 Mar 21.

18.

Transcript mapping with high-density oligonucleotide tiling arrays.

Huber W, Toedling J, Steinmetz LM.

Bioinformatics. 2006 Aug 15;22(16):1963-70. Epub 2006 Jun 20.

PMID:
16787969
19.
20.

A high-resolution map of transcription in the yeast genome.

David L, Huber W, Granovskaia M, Toedling J, Palm CJ, Bofkin L, Jones T, Davis RW, Steinmetz LM.

Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5320-5. Epub 2006 Mar 28.

21.

MACAT--microarray chromosome analysis tool.

Toedling J, Schmeier S, Heinig M, Georgi B, Roepcke S.

Bioinformatics. 2005 May 1;21(9):2112-3. Epub 2004 Nov 30.

PMID:
15572464

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