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Items: 32

1.

An integrative transcriptome analysis indicates regulatory mRNA-miRNA networks for residual feed intake in Nelore cattle.

De Oliveira PSN, Coutinho LL, Tizioto PC, Cesar ASM, de Oliveira GB, Diniz WJDS, De Lima AO, Reecy JM, Mourão GB, Zerlotini A, Regitano LCA.

Sci Rep. 2018 Nov 20;8(1):17072. doi: 10.1038/s41598-018-35315-5.

2.

A comprehensive manually-curated compendium of bovine transcription factors.

de Souza MM, Zerlotini A, Geistlinger L, Tizioto PC, Taylor JF, Rocha MIP, Diniz WJS, Coutinho LL, Regitano LCA.

Sci Rep. 2018 Sep 13;8(1):13747. doi: 10.1038/s41598-018-32146-2.

3.

Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits.

Cesar ASM, Regitano LCA, Reecy JM, Poleti MD, Oliveira PSN, de Oliveira GB, Moreira GCM, Mudadu MA, Tizioto PC, Koltes JE, Fritz-Waters E, Kramer L, Garrick D, Beiki H, Geistlinger L, Mourão GB, Zerlotini A, Coutinho LL.

BMC Genomics. 2018 Jun 27;19(1):499. doi: 10.1186/s12864-018-4871-y.

4.

Widespread modulation of gene expression by copy number variation in skeletal muscle.

Geistlinger L, da Silva VH, Cesar ASM, Tizioto PC, Waldron L, Zimmer R, Regitano LCA, Coutinho LL.

Sci Rep. 2018 Jan 23;8(1):1399. doi: 10.1038/s41598-018-19782-4.

5.

Tissue Tropism in Host Transcriptional Response to Members of the Bovine Respiratory Disease Complex.

Behura SK, Tizioto PC, Kim J, Grupioni NV, Seabury CM, Schnabel RD, Gershwin LJ, Van Eenennaam AL, Toaff-Rosenstein R, Neibergs HL, Regitano LCA, Taylor JF.

Sci Rep. 2017 Dec 20;7(1):17938. doi: 10.1038/s41598-017-18205-0.

6.

Genome-Enabled Prediction of Breeding Values for Feedlot Average Daily Weight Gain in Nelore Cattle.

Somavilla AL, Regitano LCA, Rosa GJM, Mokry FB, Mudadu MA, Tizioto PC, Oliveira PSN, Souza MM, Coutinho LL, Munari DP.

G3 (Bethesda). 2017 Jun 7;7(6):1855-1859. doi: 10.1534/g3.117.041442.

7.

Corrigendum: Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake.

Tizioto PC, Coutinho LL, Oliveira PS, Cesar AS, Diniz WJ, Lima AO, Rocha MI, Decker JE, Schnabel RD, Mourão GB, Tullio RR, Zerlotini A, Taylor JF, Regitano LC.

Sci Rep. 2017 Apr 5;7:44345. doi: 10.1038/srep44345. No abstract available.

8.

Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake.

Tizioto PC, Coutinho LL, Oliveira PS, Cesar AS, Diniz WJ, Lima AO, Rocha MI, Decker JE, Schnabel RD, Mourão GB, Tullio RR, Zerlotini A, Taylor JF, Regitano LC.

Sci Rep. 2016 Dec 22;6:39493. doi: 10.1038/srep39493. Erratum in: Sci Rep. 2017 Apr 05;7:44345.

9.

Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content.

Cesar AS, Regitano LC, Poleti MD, Andrade SC, Tizioto PC, Oliveira PS, Felício AM, do Nascimento ML, Chaves AS, Lanna DP, Tullio RR, Nassu RT, Koltes JE, Fritz-Waters E, Mourão GB, Zerlotini-Neto A, Reecy JM, Coutinho LL.

BMC Genomics. 2016 Nov 22;17(1):961.

10.

Allele- and parent-of-origin-specific effects on expression of the KCNJ11 gene: A candidate for meat tenderness in cattle.

de Souza MM, Niciura SC, Tizioto PC, Ibelli AM, Gasparin G, Rocha MI, Bressani FA, Malagó W Jr, Diniz WJ, de Oliveira PS, Lima AO, Mudadu MA, Barioni Junior W, Coutinho LL, Regitano LC.

Genet Mol Res. 2016 Aug 29;15(3). doi: 10.4238/gmr.15038549.

PMID:
27706648
11.

Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammals.

Taylor JF, Whitacre LK, Hoff JL, Tizioto PC, Kim J, Decker JE, Schnabel RD.

Genet Sel Evol. 2016 Aug 17;48(1):59. doi: 10.1186/s12711-016-0237-6.

12.

Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle.

Diniz WJ, Coutinho LL, Tizioto PC, Cesar AS, Gromboni CF, Nogueira AR, de Oliveira PS, Souza MM, Regitano LC.

PLoS One. 2016 Aug 17;11(8):e0161160. doi: 10.1371/journal.pone.0161160. eCollection 2016.

13.

A single nucleotide polymorphism in NEUROD1 is associated with production traits in Nelore beef cattle.

de Oliveira PS, Tizioto PC, Malago W Jr, do Nascimento ML, Cesar AS, Diniz WJ, de Souza MM, Lanna DP, Tullio RR, Mourão GB, de A Mudadu M, Coutinho LL, de A Regitano LC.

Genet Mol Res. 2016 Jul 14;15(2). doi: 10.4238/gmr.15028161.

14.

Erratum to: 'Genomic structure and marker-derived gene networks for growth and meat quality traits of Brazilian Nelore beef cattle'.

Mudadu MA, Porto-Neto LR, Mokry FB, Tizioto PC, Oliveira PS, Tullio RR, Nassu RT, Niciura SC, Tholon P, Alencar MM, Higa RH, Rosa AN, Feijó GL, Ferraz AL, Silva LO, Medeiros SR, Lanna DP, Nascimento ML, Chaves AS, Souza AR, Packer IU, Torres RA Jr, Siqueira F, Mourão GB, Coutinho LL, Reverter A, Regitano LC.

BMC Genomics. 2016 Jul 13;17(1):492. No abstract available.

15.

Expression of the Bovine NK-Lysin Gene Family and Activity against Respiratory Pathogens.

Chen J, Yang C, Tizioto PC, Huang H, Lee MO, Payne HR, Lawhon SD, Schroeder F, Taylor JF, Womack JE.

PLoS One. 2016 Jul 13;11(7):e0158882. doi: 10.1371/journal.pone.0158882. eCollection 2016.

16.

Variation in myogenic differentiation 1 mRNA abundance is associated with beef tenderness in Nelore cattle.

Tizioto PC, Coutinho LL, Mourão GB, Gasparin G, Malagó W Jr, Bressani FA, Tullio RR, Nassu RT, Taylor JF, Regitano LC.

Anim Genet. 2016 Aug;47(4):491-4. doi: 10.1111/age.12434. Epub 2016 Mar 30.

PMID:
27028139
17.

Genomic structure and marker-derived gene networks for growth and meat quality traits of Brazilian Nelore beef cattle.

Mudadu MA, Porto-Neto LR, Mokry FB, Tizioto PC, Oliveira PS, Tullio RR, Nassu RT, Niciura SC, Tholon P, Alencar MM, Higa RH, Rosa AN, Feijó GL, Ferraz AL, Silva LO, Medeiros SR, Lanna DP, Nascimento ML, Chaves AS, Souza AR, Packer IU, Torres RA Jr, Siqueira F, Mourão GB, Coutinho LL, Reverter A, Regitano LC.

BMC Genomics. 2016 Mar 15;17:235. doi: 10.1186/s12864-016-2535-3. Erratum in: BMC Genomics. 2016;17(1):492.

18.

What's in your next-generation sequence data? An exploration of unmapped DNA and RNA sequence reads from the bovine reference individual.

Whitacre LK, Tizioto PC, Kim J, Sonstegard TS, Schroeder SG, Alexander LJ, Medrano JF, Schnabel RD, Taylor JF, Decker JE.

BMC Genomics. 2015 Dec 29;16:1114. doi: 10.1186/s12864-015-2313-7.

19.

Candidate genes for carcass traits in a tropical-adapted Brazilian composite beef breed.

Veneroni-Gouveia G, Tizioto PC, Meirelles SL, Santiago AC, Alencar MM, Regitano LC.

Genet Mol Res. 2015 Dec 11;14(4):16667-74. doi: 10.4238/2015.December.11.14.

20.

Immunological Response to Single Pathogen Challenge with Agents of the Bovine Respiratory Disease Complex: An RNA-Sequence Analysis of the Bronchial Lymph Node Transcriptome.

Tizioto PC, Kim J, Seabury CM, Schnabel RD, Gershwin LJ, Van Eenennaam AL, Toaff-Rosenstein R, Neibergs HL; Bovine Respiratory Disease Complex Coordinated Agricultural Project Research Team, Taylor JF.

PLoS One. 2015 Jun 29;10(6):e0131459. doi: 10.1371/journal.pone.0131459. eCollection 2015.

21.

Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes.

Tizioto PC, Coutinho LL, Decker JE, Schnabel RD, Rosa KO, Oliveira PS, Souza MM, Mourão GB, Tullio RR, Chaves AS, Lanna DP, Zerlotini-Neto A, Mudadu MA, Taylor JF, Regitano LC.

BMC Genomics. 2015 Mar 25;16:242. doi: 10.1186/s12864-015-1464-x.

22.

Detection of quantitative trait loci for mineral content of Nelore longissimus dorsi muscle.

Tizioto PC, Taylor JF, Decker JE, Gromboni CF, Mudadu MA, Schnabel RD, Coutinho LL, Mourão GB, Oliveira PS, Souza MM, Reecy JM, Nassu RT, Bressani FA, Tholon P, Sonstegard TS, Alencar MM, Tullio RR, Nogueira AR, Regitano LC.

Genet Sel Evol. 2015 Mar 11;47:15. doi: 10.1186/s12711-014-0083-3.

23.

Single nucleotide polymorphisms in candidate genes associated with gastrointestinal nematode infection in goats.

Bressani FA, Tizioto PC, Giglioti R, Meirelles SL, Coutinho R, Benvenuti CL, Malagó W Jr, Mudadu MA, Vieira LS, Zaros LG, Carrilho E, Regitano LC.

Genet Mol Res. 2014 Oct 20;13(4):8530-6. doi: 10.4238/2014.October.20.29.

24.

Identification of genomic regions associated with feed efficiency in Nelore cattle.

de Oliveira PS, Cesar AS, do Nascimento ML, Chaves AS, Tizioto PC, Tullio RR, Lanna DP, Rosa AN, Sonstegard TS, Mourao GB, Reecy JM, Garrick DJ, Mudadu MA, Coutinho LL, Regitano LC.

BMC Genet. 2014 Sep 26;15:100. doi: 10.1186/s12863-014-0100-0.

25.

Identification of KCNJ11 as a functional candidate gene for bovine meat tenderness.

Tizioto PC, Gasparin G, Souza MM, Mudadu MA, Coutinho LL, Mourão GB, Tholon P, Meirelles SL, Tullio RR, Rosa AN, Alencar MM, Medeiros SR, Siqueira F, Feijó GL, Nassu RT, Regitano LC.

Physiol Genomics. 2013 Dec 15;45(24):1215-21. doi: 10.1152/physiolgenomics.00137.2012. Epub 2013 Oct 22.

PMID:
24151244
26.

Genome scan for meat quality traits in Nelore beef cattle.

Tizioto PC, Decker JE, Taylor JF, Schnabel RD, Mudadu MA, Silva FL, Mourão GB, Coutinho LL, Tholon P, Sonstegard TS, Rosa AN, Alencar MM, Tullio RR, Medeiros SR, Nassu RT, Feijó GL, Silva LO, Torres RA, Siqueira F, Higa RH, Regitano LC.

Physiol Genomics. 2013 Nov 1;45(21):1012-20. doi: 10.1152/physiolgenomics.00066.2013. Epub 2013 Sep 10.

PMID:
24022219
27.

Calcium and potassium content in beef: influences on tenderness and associations with molecular markers in Nellore cattle.

Tizioto PC, Gromboni CF, Nogueira AR, de Souza MM, Mudadu Mde A, Tholon P, Rosa Ado N, Tullio RR, Medeiros SR, Nassu RT, Regitano LC.

Meat Sci. 2014 Jan;96(1):436-40. doi: 10.1016/j.meatsci.2013.08.001. Epub 2013 Aug 9.

28.

Characterization of the rat developmental liver transcriptome.

Chapple RH, Tizioto PC, Wells KD, Givan SA, Kim J, McKay SD, Schnabel RD, Taylor JF.

Physiol Genomics. 2013 Apr 16;45(8):301-11. doi: 10.1152/physiolgenomics.00128.2012. Epub 2013 Feb 19.

29.

Babesia bovis infection in cattle in the southwestern Brazilian Amazon.

Brito LG, Rocha RB, Barbieri Fda S, Ribeiro ES, Vendrami FB, Souza GC, Giglioti R, Regitano LC, Falcoski TO, Tizioto PC, Oliveira MC.

Ticks Tick Borne Dis. 2013 Feb;4(1-2):78-82. doi: 10.1016/j.ttbdis.2012.08.001. Epub 2013 Jan 9.

PMID:
23312480
30.

Candidate genes for production traits in Nelore beef cattle.

Tizioto PC, Meirelles SL, Tulio RR, Rosa AN, Alencar MM, Medeiros SR, Siqueira F, Feijó GL, Silva LO, Torres Junior RA, Regitano LC.

Genet Mol Res. 2012 Dec 3;11(4):4138-44. doi: 10.4238/2012.September.19.1.

31.

A SNP in ASAP1 gene is associated with meat quality and production traits in Nelore breed.

Tizioto PC, Meirelles SL, Veneroni GB, Tullio RR, Rosa AN, Alencar MM, Medeiros SR, Siqueira F, Feijó GL, Silva LO, Torres RA Jr, Regitano LC.

Meat Sci. 2012 Dec;92(4):855-7. Epub 2012 May 24.

32.

Prospecting candidate SNPs for backfat in Canchim beef cattle.

Veneroni GB, Meirelles SL, Grossi DA, Gasparin G, Ibelli AM, Tizioto PC, Oliveira HN, Alencar MM, Regitano LC.

Genet Mol Res. 2010 Oct 13;9(4):1997-2003. doi: 10.4238/vol9-4gmr788.

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