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Items: 27

1.

Spatial gradients in cell wall composition and transcriptional profiles along elongating maize internodes.

Zhang Q, Cheetamun R, Dhugga KS, Rafalski JA, Tingey SV, Shirley NJ, Taylor J, Hayes K, Beatty M, Bacic A, Burton RA, Fincher GB.

BMC Plant Biol. 2014 Jan 14;14:27. doi: 10.1186/1471-2229-14-27.

2.

Endo-(1,4)-β-glucanase gene families in the grasses: temporal and spatial co-transcription of orthologous genes.

Buchanan M, Burton RA, Dhugga KS, Rafalski AJ, Tingey SV, Shirley NJ, Fincher GB.

BMC Plant Biol. 2012 Dec 11;12:235. doi: 10.1186/1471-2229-12-235.

3.

A customized gene expression microarray reveals that the brittle stem phenotype fs2 of barley is attributable to a retroelement in the HvCesA4 cellulose synthase gene.

Burton RA, Ma G, Baumann U, Harvey AJ, Shirley NJ, Taylor J, Pettolino F, Bacic A, Beatty M, Simmons CR, Dhugga KS, Rafalski JA, Tingey SV, Fincher GB.

Plant Physiol. 2010 Aug;153(4):1716-28. doi: 10.1104/pp.110.158329. Epub 2010 Jun 7.

4.

Artificial trans-acting siRNAs confer consistent and effective gene silencing.

de la Luz Gutiérrez-Nava M, Aukerman MJ, Sakai H, Tingey SV, Williams RW.

Plant Physiol. 2008 Jun;147(2):543-51. doi: 10.1104/pp.108.118307. Epub 2008 Apr 25.

5.

Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maize.

Salvi S, Sponza G, Morgante M, Tomes D, Niu X, Fengler KA, Meeley R, Ananiev EV, Svitashev S, Bruggemann E, Li B, Hainey CF, Radovic S, Zaina G, Rafalski JA, Tingey SV, Miao GH, Phillips RL, Tuberosa R.

Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11376-81. Epub 2007 Jun 26.

6.

Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana.

Hoth S, Ikeda Y, Morgante M, Wang X, Zuo J, Hanafey MK, Gaasterland T, Tingey SV, Chua NH.

FEBS Lett. 2003 Nov 20;554(3):373-80.

7.
8.

DNA array profiling of gene expression changes during maize embryo development.

Lee JM, Williams ME, Tingey SV, Rafalski JA.

Funct Integr Genomics. 2002 May;2(1-2):13-27. Epub 2002 Feb 19.

PMID:
12021847
9.

Insertion-deletion polymorphisms in 3' regions of maize genes occur frequently and can be used as highly informative genetic markers.

Bhattramakki D, Dolan M, Hanafey M, Wineland R, Vaske D, Register JC 3rd, Tingey SV, Rafalski A.

Plant Mol Biol. 2002 Mar-Apr;48(5-6):539-47.

PMID:
12004893
10.

Development of a high-throughput yeast two-hybrid screening system to study protein-protein interactions in plants.

Fang Y, Macool DJ, Xue Z, Heppard EP, Hainey CF, Tingey SV, Miao GH.

Mol Genet Genomics. 2002 Apr;267(2):142-53. Epub 2002 Mar 23.

PMID:
11976957
11.

The genome of the natural genetic engineer Agrobacterium tumefaciens C58.

Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF Jr, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D Sr, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW.

Science. 2001 Dec 14;294(5550):2317-23.

12.
13.

Conservation of microstructure between a sequenced region of the genome of rice and multiple segments of the genome of Arabidopsis thaliana.

Mayer K, Murphy G, Tarchini R, Wambutt R, Volckaert G, Pohl T, Düsterhöft A, Stiekema W, Entian KD, Terryn N, Lemcke K, Haase D, Hall CR, van Dodeweerd AM, Tingey SV, Mewes HW, Bevan MW, Bancroft I.

Genome Res. 2001 Jul;11(7):1167-74.

14.

Rice ESTs with disease-resistance gene- or defense-response gene-like sequences mapped to regions containing major resistance genes or QTLs.

Wang Z, Taramino G, Yang D, Liu G, Tingey SV, Miao GH, Wang GL.

Mol Genet Genomics. 2001 Apr;265(2):302-10.

PMID:
11361341
15.

Size homoplasy in chloroplast microsatellites of wild perennial relatives of soybean (Glycine subgenus Glycine)

Doyle JJ, Morgante M, Tingey SV, Powell W.

Mol Biol Evol. 1998 Feb;15(2):215-8. No abstract available.

PMID:
9491617
16.

Genepool variation in genus Glycine subgenus Soja revealed by polymorphic nuclear and chloroplast microsatellites.

Powell W, Morgante M, Doyle JJ, McNicol JW, Tingey SV, Rafalski AJ.

Genetics. 1996 Oct;144(2):793-803.

17.

Hypervariable microsatellites provide a general source of polymorphic DNA markers for the chloroplast genome.

Powell W, Morgante M, Andre C, McNicol JW, Machray GC, Doyle JJ, Tingey SV, Rafalski JA.

Curr Biol. 1995 Sep 1;5(9):1023-9.

18.

RAPD assay. A novel technique for genetic diagnostics.

del Tufo JP, Tingey SV.

Methods Mol Biol. 1994;28:237-41. No abstract available.

PMID:
8118513
19.

Genetic diagnostics in plant breeding: RAPDs, microsatellites and machines.

Rafalski JA, Tingey SV.

Trends Genet. 1993 Aug;9(8):275-80. Review.

PMID:
8104363
20.

Genetic analysis with random amplified polymorphic DNA markers.

Tingey SV, del Tufo JP.

Plant Physiol. 1993 Feb;101(2):349-52. Review. No abstract available.

21.

Genetic analysis using random amplified polymorphic DNA markers.

Williams JG, Hanafey MK, Rafalski JA, Tingey SV.

Methods Enzymol. 1993;218:704-40. No abstract available.

PMID:
8510556
22.

Global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic DNAs.

Reiter RS, Williams JG, Feldmann KA, Rafalski JA, Tingey SV, Scolnik PA.

Proc Natl Acad Sci U S A. 1992 Feb 15;89(4):1477-81.

23.

DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Williams JG, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV.

Nucleic Acids Res. 1990 Nov 25;18(22):6531-5.

24.

Chloroplast and cytosolic glutamine synthetase are encoded by homologous nuclear genes which are differentially expressed in vivo.

Tingey SV, Tsai FY, Edwards JW, Walker EL, Coruzzi GM.

J Biol Chem. 1988 Jul 15;263(20):9651-7.

25.
27.

Variability of Reaction Kinetics for Ribulose-1,5-bisphosphate Carboxylase in a Barley Population.

Rinehart CA, Tingey SV, Andersen WR.

Plant Physiol. 1983 May;72(1):76-9.

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