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Items: 1 to 50 of 57

1.

Experimental reconstruction of double-stranded break repair-mediated plastid DNA insertion into the tobacco nucleus.

Wang D, Gu J, David R, Wang Z, Yang S, Searle IR, Zhu JK, Timmis JN.

Plant J. 2018 Jan;93(2):227-234. doi: 10.1111/tpj.13769. Epub 2017 Dec 16.

2.

Transcription of nuclear organellar DNA in a model plant system.

Wang D, Qu Z, Adelson DL, Zhu JK, Timmis JN.

Genome Biol Evol. 2014 May 27;6(6):1327-34. doi: 10.1093/gbe/evu111.

3.

Evolution and biology of supernumerary B chromosomes.

Houben A, Banaei-Moghaddam AM, Klemme S, Timmis JN.

Cell Mol Life Sci. 2014 Feb;71(3):467-78. doi: 10.1007/s00018-013-1437-7. Epub 2013 Aug 3. Review.

PMID:
23912901
4.

Cytoplasmic organelle DNA preferentially inserts into open chromatin.

Wang D, Timmis JN.

Genome Biol Evol. 2013;5(6):1060-4. doi: 10.1093/gbe/evt070.

5.

Potential functional replacement of the plastidic acetyl-CoA carboxylase subunit (accD) gene by recent transfers to the nucleus in some angiosperm lineages.

Rousseau-Gueutin M, Huang X, Higginson E, Ayliffe M, Day A, Timmis JN.

Plant Physiol. 2013 Apr;161(4):1918-29. doi: 10.1104/pp.113.214528. Epub 2013 Feb 22.

6.

Endosymbiotic evolution: the totalitarian nucleus is foiled again.

Timmis JN, Wang D.

Curr Biol. 2013 Jan 7;23(1):R30-2. doi: 10.1016/j.cub.2012.11.038.

7.

Endosymbiotic evolution: RNA intermediates in endosymbiotic gene transfer.

Timmis JN.

Curr Biol. 2012 May 8;22(9):R296-8. doi: 10.1016/j.cub.2012.03.043. Epub 2012 May 7.

8.

Nuclear genome diversity in somatic cells is accelerated by environmental stress.

Wang D, Lloyd AH, Timmis JN.

Plant Signal Behav. 2012 May;7(5):595-7. doi: 10.4161/psb.19871. Epub 2012 Apr 20.

9.

Endosybiotic evolution in action: Real-time observations of chloroplast to nucleus gene transfer.

Lloyd AH, Timmis JN.

Mob Genet Elements. 2011 Sep;1(3):216-220. Epub 2011 Sep 1.

10.

Plastid DNA in the nucleus: new genes for old.

Rousseau-Gueutin M, Ayliffe MA, Timmis JN.

Plant Signal Behav. 2012 Feb;7(2):269-72. doi: 10.4161/psb.18762. Epub 2012 Feb 1.

11.

Single molecule PCR reveals similar patterns of non-homologous DSB repair in tobacco and Arabidopsis.

Lloyd AH, Wang D, Timmis JN.

PLoS One. 2012;7(2):e32255. doi: 10.1371/journal.pone.0032255. Epub 2012 Feb 28.

12.

Plastid sequences contribute to some plant mitochondrial genes.

Wang D, Rousseau-Gueutin M, Timmis JN.

Mol Biol Evol. 2012 Jul;29(7):1707-11. doi: 10.1093/molbev/mss016. Epub 2012 Jan 24.

PMID:
22319165
13.

Environmental stress increases the entry of cytoplasmic organellar DNA into the nucleus in plants.

Wang D, Lloyd AH, Timmis JN.

Proc Natl Acad Sci U S A. 2012 Feb 14;109(7):2444-8. doi: 10.1073/pnas.1117890109. Epub 2012 Jan 30.

14.

Conservation of plastid sequences in the plant nuclear genome for millions of years facilitates endosymbiotic evolution.

Rousseau-Gueutin M, Ayliffe MA, Timmis JN.

Plant Physiol. 2011 Dec;157(4):2181-93. doi: 10.1104/pp.111.185074. Epub 2011 Oct 27.

15.

Introducing an RNA editing requirement into a plastid-localised transgene reduces but does not eliminate functional gene transfer to the nucleus.

Sheppard AE, Madesis P, Lloyd AH, Day A, Ayliffe MA, Timmis JN.

Plant Mol Biol. 2011 Jul;76(3-5):299-309. doi: 10.1007/s11103-011-9764-2. Epub 2011 Mar 15.

PMID:
21404088
16.

The origin and characterization of new nuclear genes originating from a cytoplasmic organellar genome.

Lloyd AH, Timmis JN.

Mol Biol Evol. 2011 Jul;28(7):2019-28. doi: 10.1093/molbev/msr021. Epub 2011 Jan 20.

PMID:
21252282
17.

Instability of plastid DNA in the nuclear genome.

Sheppard AE, Timmis JN.

PLoS Genet. 2009 Jan;5(1):e1000323. doi: 10.1371/journal.pgen.1000323. Epub 2009 Jan 2.

18.

Transfer of plastid DNA to the nucleus is elevated during male gametogenesis in tobacco.

Sheppard AE, Ayliffe MA, Blatch L, Day A, Delaney SK, Khairul-Fahmy N, Li Y, Madesis P, Pryor AJ, Timmis JN.

Plant Physiol. 2008 Sep;148(1):328-36. doi: 10.1104/pp.108.119107. Epub 2008 Jul 25.

19.

Reconstructing evolution: gene transfer from plastids to the nucleus.

Bock R, Timmis JN.

Bioessays. 2008 Jun;30(6):556-66. doi: 10.1002/bies.20761. Review.

PMID:
18478535
20.

Evidence for alternative splicing of MADS-box transcripts in developing cotton fibre cells.

Lightfoot DJ, Malone KM, Timmis JN, Orford SJ.

Mol Genet Genomics. 2008 Jan;279(1):75-85. Epub 2007 Oct 18.

PMID:
17943315
21.

The fiber specificity of the cotton FSltp4 gene promoter is regulated by an AT-rich promoter region and the AT-hook transcription factor GhAT1.

Delaney SK, Orford SJ, Martin-Harris M, Timmis JN.

Plant Cell Physiol. 2007 Oct;48(10):1426-37. Epub 2007 Aug 21.

PMID:
17715150
22.

In situ hybridization to plant tissues and chromosomes.

Houben A, Orford SJ, Timmis JN.

Methods Mol Biol. 2006;326:203-18. Review.

PMID:
16780203
23.

Molecular evidence for transcription of genes on a B chromosome in Crepis capillaris.

Leach CR, Houben A, Field B, Pistrick K, Demidov D, Timmis JN.

Genetics. 2005 Sep;171(1):269-78. Epub 2005 Jun 14.

24.

Mutational decay and age of chloroplast and mitochondrial genomes transferred recently to angiosperm nuclear chromosomes.

Huang CY, Grünheit N, Ahmadinejad N, Timmis JN, Martin W.

Plant Physiol. 2005 Jul;138(3):1723-33. Epub 2005 Jun 10.

25.

Two WD-repeat genes from cotton are functional homologues of the Arabidopsis thaliana TRANSPARENT TESTA GLABRA1 (TTG1) gene.

Humphries JA, Walker AR, Timmis JN, Orford SJ.

Plant Mol Biol. 2005 Jan;57(1):67-81.

PMID:
15821869
26.

The B chromosomes in Brachycome.

Leach CR, Houben A, Timmis JN.

Cytogenet Genome Res. 2004;106(2-4):199-209. Review.

PMID:
15292592
27.

Simple and complex nuclear loci created by newly transferred chloroplast DNA in tobacco.

Huang CY, Ayliffe MA, Timmis JN.

Proc Natl Acad Sci U S A. 2004 Jun 29;101(26):9710-5. Epub 2004 Jun 21.

28.

Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes.

Timmis JN, Ayliffe MA, Huang CY, Martin W.

Nat Rev Genet. 2004 Feb;5(2):123-35. Review. No abstract available.

PMID:
14735123
29.

Organelle evolution meets biotechnology.

Huang CY, Ayliffe MA, Timmis JN.

Nat Biotechnol. 2003 May;21(5):489-90. No abstract available.

PMID:
12721565
30.

Direct measurement of the transfer rate of chloroplast DNA into the nucleus.

Huang CY, Ayliffe MA, Timmis JN.

Nature. 2003 Mar 6;422(6927):72-6. Epub 2003 Feb 5.

PMID:
12594458
31.

Characterisation of six alpha-expansin genes in Gossypium hirsutum (upland cotton).

Harmer SE, Orford SJ, Timmis JN.

Mol Genet Genomics. 2002 Sep;268(1):1-9. Epub 2002 Aug 8.

PMID:
12242493
32.

The genomic complexity of micro B chromosomes of Brachycome dichromosomatica.

Houben A, Verlin D, Leach CR, Timmis JN.

Chromosoma. 2001 Dec;110(7):451-9. Epub 2001 Nov 1.

PMID:
11862452
33.

Cloning and characterisation of polymorphic heterochromatic segments of Brachycome dichromosomatica.

Houben A, Wanner G, Hanson L, Verlin D, Leach CR, Timmis JN.

Chromosoma. 2000 Jun;109(3):206-13. Erratum in: Chromosoma 2000 Sep;109(6):433.

PMID:
10929200
34.

Novel insertion sequence elements associated with genetic heterogeneity and phenotype conversion in Ralstonia solanacearum.

Jeong EL, Timmis JN.

J Bacteriol. 2000 Aug;182(16):4673-6. Erratum in: J Bacteriol 2000 Nov;182(22):6541.

35.

Expression of a lipid transfer protein gene family during cotton fibre development.

Orford SJ, Timmis JN.

Biochim Biophys Acta. 2000 Jan 17;1483(2):275-84.

PMID:
10634943
36.

Specific expression of an expansin gene during elongation of cotton fibres.

Orford SJ, Timmis JN.

Biochim Biophys Acta. 1998 Jul 9;1398(3):342-6.

PMID:
9655931
37.

Analysis of plastid DNA-like sequences within the nuclear genomes of higher plants.

Ayliffe MA, Scott NS, Timmis JN.

Mol Biol Evol. 1998 Jun;15(6):738-45.

PMID:
9615455
38.

A repetitive DNA sequence common to the different B chromosomes of the genus Brachycome.

Houben A, Leach CR, Verlin D, Rofe R, Timmis JN.

Chromosoma. 1997 Dec;106(8):513-9.

PMID:
9426283
39.
40.

Differences of histone H4 acetylation and replication timing between A and B chromosomes of brachycome dichromosomatica.

Houben A, Belyaev ND, Leach CR, Timmis JN.

Chromosome Res. 1997 Jun;5(4):233-7.

PMID:
9244450
41.

The molecular organisation of a B chromosome tandem repeat sequence from Brachycome dichromosomatica.

Franks TK, Houben A, Leach CR, Timmis JN.

Chromosoma. 1996 Oct;105(4):223-30.

PMID:
8854881
42.

A hypervariable middle repetitive DNA sequence from citrus.

Orford SJ, Scott NS, Timmis JN.

Theor Appl Genet. 1995 Dec;91(8):1248-52. doi: 10.1007/BF00220936.

PMID:
24170053
43.

Organisation and origin of a B chromosome centromeric sequence from Brachycome dichromosomatica.

Leach CR, Donald TM, Franks TK, Spiniello SS, Hanrahan CF, Timmis JN.

Chromosoma. 1995 Jul;103(10):708-14.

PMID:
7664618
44.

Ribosomal RNA genes and the B chromosome of Brachycome dichromosomatica.

Donald TM, Leach CR, Clough A, Timmis JN.

Heredity (Edinb). 1995 May;74 ( Pt 5):556-61.

PMID:
7759291
45.

Plastid DNA sequence homologies in the tobacco nuclear genome.

Ayliffe MA, Timmis JN.

Mol Gen Genet. 1992 Dec;236(1):105-12.

PMID:
1337369
46.

Tobacco nuclear DNA contains long tracts of homology to chloroplast DNA.

Ayliffe MA, Timmis JN.

Theor Appl Genet. 1992 Nov;85(2-3):229-38. doi: 10.1007/BF00222864.

PMID:
24197309
47.

A sequence specific to B chromosomes of Brachycome dichromosomatica.

John UP, Leach CR, Timmis JN.

Genome. 1991 Oct;34(5):739-44.

PMID:
1955155
48.

Deletion mutation as a means of isolating avirulence genes in flax rust.

Timmis JN, Whisson DL, Binns AM, Mayo MJ, Mayo GM.

Theor Appl Genet. 1990 May;79(3):411-6. doi: 10.1007/BF01186087.

PMID:
24226362
49.

Structure of melon rDNA and nucleotide sequence of the 17-25S spacer region.

Kavanagh TA, Timmis JN.

Theor Appl Genet. 1988 Nov;76(5):673-80. doi: 10.1007/BF00303512.

PMID:
24232344
50.

Heterogeneity in cucumber ribosomal DNA.

Kavanagh TA, Timmis JN.

Theor Appl Genet. 1986 Jun;72(3):337-45. doi: 10.1007/BF00288570.

PMID:
24247940

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