Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 65

1.

Salmonella Typhi, Paratyphi A, Enteritidis and Typhimurium core proteomes reveal differentially expressed proteins linked to the cell surface and pathogenicity.

Saleh S, Van Puyvelde S, Staes A, Timmerman E, Barbé B, Jacobs J, Gevaert K, Deborggraeve S.

PLoS Negl Trop Dis. 2019 May 24;13(5):e0007416. doi: 10.1371/journal.pntd.0007416. eCollection 2019 May.

2.

Creating Appropriate Training Environments to Improve Technical, Decision-Making, and Physical Skills in Field Hockey.

Timmerman EA, Savelsbergh GJP, Farrow D.

Res Q Exerc Sport. 2019 Jun;90(2):180-189. doi: 10.1080/02701367.2019.1571678. Epub 2019 Feb 22.

PMID:
30794115
3.

Impairment of Angiogenesis by Fatty Acid Synthase Inhibition Involves mTOR Malonylation.

Bruning U, Morales-Rodriguez F, Kalucka J, Goveia J, Taverna F, Queiroz KCS, Dubois C, Cantelmo AR, Chen R, Loroch S, Timmerman E, Caixeta V, Bloch K, Conradi LC, Treps L, Staes A, Gevaert K, Tee A, Dewerchin M, Semenkovich CF, Impens F, Schilling B, Verdin E, Swinnen JV, Meier JL, Kulkarni RA, Sickmann A, Ghesquière B, Schoonjans L, Li X, Mazzone M, Carmeliet P.

Cell Metab. 2018 Dec 4;28(6):866-880.e15. doi: 10.1016/j.cmet.2018.07.019. Epub 2018 Aug 23.

PMID:
30146486
4.

NAA80 is actin's N-terminal acetyltransferase and regulates cytoskeleton assembly and cell motility.

Drazic A, Aksnes H, Marie M, Boczkowska M, Varland S, Timmerman E, Foyn H, Glomnes N, Rebowski G, Impens F, Gevaert K, Dominguez R, Arnesen T.

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):4399-4404. doi: 10.1073/pnas.1718336115. Epub 2018 Mar 26.

5.

Quality control in mass spectrometry-based proteomics.

Bittremieux W, Tabb DL, Impens F, Staes A, Timmerman E, Martens L, Laukens K.

Mass Spectrom Rev. 2018 Sep;37(5):697-711. doi: 10.1002/mas.21544. Epub 2017 Sep 7. Review.

PMID:
28802010
6.

Confounding factors of ultrafiltration and protein analysis in extracellular vesicle research.

Vergauwen G, Dhondt B, Van Deun J, De Smedt E, Berx G, Timmerman E, Gevaert K, Miinalainen I, Cocquyt V, Braems G, Van den Broecke R, Denys H, De Wever O, Hendrix A.

Sci Rep. 2017 Jun 2;7(1):2704. doi: 10.1038/s41598-017-02599-y.

7.

Expanding the Interactome of TES by Exploiting TES Modules with Different Subcellular Localizations.

Sala S, Van Troys M, Medves S, Catillon M, Timmerman E, Staes A, Schaffner-Reckinger E, Gevaert K, Ampe C.

J Proteome Res. 2017 May 5;16(5):2054-2071. doi: 10.1021/acs.jproteome.7b00034. Epub 2017 Apr 20.

PMID:
28378594
8.

Protease Substrate Profiling by N-Terminal COFRADIC.

Staes A, Van Damme P, Timmerman E, Ruttens B, Stes E, Gevaert K, Impens F.

Methods Mol Biol. 2017;1574:51-76. doi: 10.1007/978-1-4939-6850-3_5.

PMID:
28315243
9.

Phase Separation of C9orf72 Dipeptide Repeats Perturbs Stress Granule Dynamics.

Boeynaems S, Bogaert E, Kovacs D, Konijnenberg A, Timmerman E, Volkov A, Guharoy M, De Decker M, Jaspers T, Ryan VH, Janke AM, Baatsen P, Vercruysse T, Kolaitis RM, Daelemans D, Taylor JP, Kedersha N, Anderson P, Impens F, Sobott F, Schymkowitz J, Rousseau F, Fawzi NL, Robberecht W, Van Damme P, Tompa P, Van Den Bosch L.

Mol Cell. 2017 Mar 16;65(6):1044-1055.e5. doi: 10.1016/j.molcel.2017.02.013.

10.

A kidney transplant recipient with renal medullary viral cytopathic changes.

Ramanan P, Timmerman EA, Fidler ME, Amer H, Pritt BS, Schwab DA, Batterman HJ, Binnicker MJ.

Transpl Infect Dis. 2017 Feb;19(1). doi: 10.1111/tid.12646. Epub 2017 Jan 17.

PMID:
27925350
11.

Therapeutic CD94/NKG2A blockade improves natural killer cell dysfunction in chronic lymphocytic leukemia.

McWilliams EM, Mele JM, Cheney C, Timmerman EA, Fiazuddin F, Strattan EJ, Mo X, Byrd JC, Muthusamy N, Awan FT.

Oncoimmunology. 2016 Sep 9;5(10):e1226720. eCollection 2016.

12.

An extra dimension in protein tagging by quantifying universal proteotypic peptides using targeted proteomics.

Vandemoortele G, Staes A, Gonnelli G, Samyn N, De Sutter D, Vandermarliere E, Timmerman E, Gevaert K, Martens L, Eyckerman S.

Sci Rep. 2016 Jun 6;6:27220. doi: 10.1038/srep27220.

13.

Trapping mammalian protein complexes in viral particles.

Eyckerman S, Titeca K, Van Quickelberghe E, Cloots E, Verhee A, Samyn N, De Ceuninck L, Timmerman E, De Sutter D, Lievens S, Van Calenbergh S, Gevaert K, Tavernier J.

Nat Commun. 2016 Apr 28;7:11416. doi: 10.1038/ncomms11416.

14.

It's Time for Some "Site"-Seeing: Novel Tools to Monitor the Ubiquitin Landscape in Arabidopsis thaliana.

Walton A, Stes E, Cybulski N, Van Bel M, Iñigo S, Durand AN, Timmerman E, Heyman J, Pauwels L, De Veylder L, Goossens A, De Smet I, Coppens F, Goormachtig S, Gevaert K.

Plant Cell. 2016 Jan;28(1):6-16. doi: 10.1105/tpc.15.00878. Epub 2016 Jan 7. Review.

15.

Toll-like Receptor 4 Engagement on Dendritic Cells Restrains Phago-Lysosome Fusion and Promotes Cross-Presentation of Antigens.

Alloatti A, Kotsias F, Pauwels AM, Carpier JM, Jouve M, Timmerman E, Pace L, Vargas P, Maurin M, Gehrmann U, Joannas L, Vivar OI, Lennon-Duménil AM, Savina A, Gevaert K, Beyaert R, Hoffmann E, Amigorena S.

Immunity. 2015 Dec 15;43(6):1087-100. doi: 10.1016/j.immuni.2015.11.006.

16.

Proteomic approaches to identify substrates of the three Deg/HtrA proteases of the cyanobacterium Synechocystis sp. PCC 6803.

Tam LX, Aigner H, Timmerman E, Gevaert K, Funk C.

Biochem J. 2015 Jun 15;468(3):373-84. doi: 10.1042/BJ20150097. Epub 2015 Apr 16.

PMID:
25877158
17.

The effect of equipment scaling on children's sport performance: the case for tennis.

Timmerman E, De Water J, Kachel K, Reid M, Farrow D, Savelsbergh G.

J Sports Sci. 2015;33(10):1093-100. doi: 10.1080/02640414.2014.986498. Epub 2014 Dec 23.

PMID:
25533551
18.

A COFRADIC protocol to study protein ubiquitination.

Stes E, Laga M, Walton A, Samyn N, Timmerman E, De Smet I, Goormachtig S, Gevaert K.

J Proteome Res. 2014 Jun 6;13(6):3107-13. doi: 10.1021/pr4012443. Epub 2014 May 20.

PMID:
24816145
19.

High macrosomia rate in healthy fetuses after enlarged nuchal translucency.

Timmerman E, Pajkrt E, Snijders RJ, Bilardo CM.

Prenat Diagn. 2014 Feb;34(2):103-8. doi: 10.1002/pd.4262. Epub 2014 Jan 8.

PMID:
24155168
20.

The Arabidopsis metacaspase9 degradome.

Tsiatsiani L, Timmerman E, De Bock PJ, Vercammen D, Stael S, van de Cotte B, Staes A, Goethals M, Beunens T, Van Damme P, Gevaert K, Van Breusegem F.

Plant Cell. 2013 Aug;25(8):2831-47. doi: 10.1105/tpc.113.115287. Epub 2013 Aug 20.

21.

Digestibility and IgE-binding of glycosylated codfish parvalbumin.

de Jongh HH, Robles CL, Timmerman E, Nordlee JA, Lee PW, Baumert JL, Hamilton RG, Taylor SL, Koppelman SJ.

Biomed Res Int. 2013;2013:756789. doi: 10.1155/2013/756789. Epub 2013 Jun 26.

22.

SCX charge state selective separation of tryptic peptides combined with 2D-RP-HPLC allows for detailed proteome mapping.

Betancourt LH, De Bock PJ, Staes A, Timmerman E, Perez-Riverol Y, Sanchez A, Besada V, Gonzalez LJ, Vandekerckhove J, Gevaert K.

J Proteomics. 2013 Oct 8;91:164-71. doi: 10.1016/j.jprot.2013.06.033. Epub 2013 Jul 11.

PMID:
23851314
23.

Executive response monitoring and inhibitory control in children with phenylketonuria: effects of expectancy.

Araujo GC, Christ SE, Grange DK, Steiner RD, Coleman C, Timmerman E, White DA.

Dev Neuropsychol. 2013;38(3):139-52. doi: 10.1080/87565641.2012.718816.

PMID:
23573793
24.

A catalogue of putative HIV-1 protease host cell substrates.

Impens F, Timmerman E, Staes A, Moens K, Ariën KK, Verhasselt B, Vandekerckhove J, Gevaert K.

Biol Chem. 2012 Sep;393(9):915-31. doi: 10.1515/hsz-2012-0168.

PMID:
22944692
25.

N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

Van Damme P, Lasa M, Polevoda B, Gazquez C, Elosegui-Artola A, Kim DS, De Juan-Pardo E, Demeyer K, Hole K, Larrea E, Timmerman E, Prieto J, Arnesen T, Sherman F, Gevaert K, Aldabe R.

Proc Natl Acad Sci U S A. 2012 Jul 31;109(31):12449-54. doi: 10.1073/pnas.1210303109. Epub 2012 Jul 18.

26.

Chromatographic retention time prediction for posttranslationally modified peptides.

Moruz L, Staes A, Foster JM, Hatzou M, Timmerman E, Martens L, Käll L.

Proteomics. 2012 Apr;12(8):1151-9. doi: 10.1002/pmic.201100386.

PMID:
22577017
27.

Cells lacking β-actin are genetically reprogrammed and maintain conditional migratory capacity.

Tondeleir D, Lambrechts A, Müller M, Jonckheere V, Doll T, Vandamme D, Bakkali K, Waterschoot D, Lemaistre M, Debeir O, Decaestecker C, Hinz B, Staes A, Timmerman E, Colaert N, Gevaert K, Vandekerckhove J, Ampe C.

Mol Cell Proteomics. 2012 Aug;11(8):255-71. doi: 10.1074/mcp.M111.015099. Epub 2012 Mar 22.

28.

Selecting protein N-terminal peptides by combined fractional diagonal chromatography.

Staes A, Impens F, Van Damme P, Ruttens B, Goethals M, Demol H, Timmerman E, Vandekerckhove J, Gevaert K.

Nat Protoc. 2011 Jul 14;6(8):1130-41. doi: 10.1038/nprot.2011.355.

PMID:
21799483
29.

Thermo-msf-parser: an open source Java library to parse and visualize Thermo Proteome Discoverer msf files.

Colaert N, Barsnes H, Vaudel M, Helsens K, Timmerman E, Sickmann A, Gevaert K, Martens L.

J Proteome Res. 2011 Aug 5;10(8):3840-3. doi: 10.1021/pr2005154. Epub 2011 Jul 11.

PMID:
21714566
30.

Redox proteomics of protein-bound methionine oxidation.

Ghesquière B, Jonckheere V, Colaert N, Van Durme J, Timmerman E, Goethals M, Schymkowitz J, Rousseau F, Vandekerckhove J, Gevaert K.

Mol Cell Proteomics. 2011 May;10(5):M110.006866. doi: 10.1074/mcp.M110.006866. Epub 2011 Mar 15.

31.

Low-resistance hepatic artery flow in first-trimester fetuses: an ominous sign.

Bilardo CM, Timmerman E, De Medina PG, Clur SA.

Ultrasound Obstet Gynecol. 2011 Apr;37(4):438-43. doi: 10.1002/uog.7766.

32.

A quantitative proteomics design for systematic identification of protease cleavage events.

Impens F, Colaert N, Helsens K, Ghesquière B, Timmerman E, De Bock PJ, Chain BM, Vandekerckhove J, Gevaert K.

Mol Cell Proteomics. 2010 Oct;9(10):2327-33. doi: 10.1074/mcp.M110.001271. Epub 2010 Jul 13.

33.

First-trimester measurement of the ductus venosus pulsatility index and the prediction of congenital heart defects.

Timmerman E, Clur SA, Pajkrt E, Bilardo CM.

Ultrasound Obstet Gynecol. 2010 Dec;36(6):668-75. doi: 10.1002/uog.7742. Epub 2010 Jul 8.

34.

The substrate specificity profile of human granzyme A.

Van Damme P, Maurer-Stroh S, Hao H, Colaert N, Timmerman E, Eisenhaber F, Vandekerckhove J, Gevaert K.

Biol Chem. 2010 Aug;391(8):983-97. doi: 10.1515/BC.2010.096.

PMID:
20536382
35.

Complementary positional proteomics for screening substrates of endo- and exoproteases.

Van Damme P, Staes A, Bronsoms S, Helsens K, Colaert N, Timmerman E, Aviles FX, Vandekerckhove J, Gevaert K.

Nat Methods. 2010 Jul;7(7):512-5. doi: 10.1038/nmeth.1469. Epub 2010 Jun 6.

PMID:
20526345
36.

Ductus venosus pulsatility index measurement reduces the false-positive rate in first-trimester screening.

Timmerman E, Oude Rengerink K, Pajkrt E, Opmeer BC, van der Post JA, Bilardo CM.

Ultrasound Obstet Gynecol. 2010 Dec;36(6):661-7. doi: 10.1002/uog.7706. Epub 2010 Jun 2.

37.

Enlarged nuchal translucency in chromosomally normal fetuses: strong association with orofacial clefts.

Timmerman E, Pajkrt E, Maas SM, Bilardo CM.

Ultrasound Obstet Gynecol. 2010 Oct;36(4):427-32. doi: 10.1002/uog.7650.

38.

Increased nuchal translucency in euploid fetuses--what should we be telling the parents?

Bilardo CM, Timmerman E, Pajkrt E, van Maarle M.

Prenat Diagn. 2010 Feb;30(2):93-102. doi: 10.1002/pd.2396. Review.

PMID:
20077440
39.

ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics.

Helsens K, Colaert N, Barsnes H, Muth T, Flikka K, Staes A, Timmerman E, Wortelkamp S, Sickmann A, Vandekerckhove J, Gevaert K, Martens L.

Proteomics. 2010 Mar;10(6):1261-4. doi: 10.1002/pmic.200900409. Erratum in: Proteomics.2010 Jul;10(13):2560.

PMID:
20058248
40.

Integrated proteomic analysis reveals a substantial enrichment of protein trafficking processes in hippocampus tissue after hypoxic stress.

Van Elzen R, Ghesquière B, Timmerman E, Vandamme S, Moens L, Gevaert K, Dewilde S.

J Proteome Res. 2010 Jan;9(1):204-15. doi: 10.1021/pr900517m.

PMID:
19911852
41.

Identification and functional characterization of N-terminally acetylated proteins in Drosophila melanogaster.

Goetze S, Qeli E, Mosimann C, Staes A, Gerrits B, Roschitzki B, Mohanty S, Niederer EM, Laczko E, Timmerman E, Lange V, Hafen E, Aebersold R, Vandekerckhove J, Basler K, Ahrens CH, Gevaert K, Brunner E.

PLoS Biol. 2009 Nov;7(11):e1000236. doi: 10.1371/journal.pbio.1000236. Epub 2009 Nov 3.

42.

Analysis of the gamma-secretase interactome and validation of its association with tetraspanin-enriched microdomains.

Wakabayashi T, Craessaerts K, Bammens L, Bentahir M, Borgions F, Herdewijn P, Staes A, Timmerman E, Vandekerckhove J, Rubinstein E, Boucheix C, Gevaert K, De Strooper B.

Nat Cell Biol. 2009 Nov;11(11):1340-6. doi: 10.1038/ncb1978. Epub 2009 Oct 18.

PMID:
19838174
43.

In vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatography.

Ghesquière B, Colaert N, Helsens K, Dejager L, Vanhaute C, Verleysen K, Kas K, Timmerman E, Goethals M, Libert C, Vandekerckhove J, Gevaert K.

Mol Cell Proteomics. 2009 Dec;8(12):2642-52. doi: 10.1074/mcp.M900259-MCP200. Epub 2009 Sep 9.

44.

Identification of Chlamydia trachomatis CT621, a protein delivered through the type III secretion system to the host cell cytoplasm and nucleus.

Hobolt-Pedersen AS, Christiansen G, Timmerman E, Gevaert K, Birkelund S.

FEMS Immunol Med Microbiol. 2009 Oct;57(1):46-58. doi: 10.1111/j.1574-695X.2009.00581.x. Epub 2009 Jul 2.

45.

Male gender as a favorable prognostic factor in pregnancies with enlarged nuchal translucency.

Timmerman E, Pajkrt E, Bilardo CM.

Ultrasound Obstet Gynecol. 2009 Oct;34(4):373-8. doi: 10.1002/uog.6397.

46.

Analysis of proteins in Chlamydia trachomatis L2 outer membrane complex, COMC.

Birkelund S, Morgan-Fisher M, Timmerman E, Gevaert K, Shaw AC, Christiansen G.

FEMS Immunol Med Microbiol. 2009 Mar;55(2):187-95. doi: 10.1111/j.1574-695X.2009.00522.x. Epub 2009 Jan 27.

47.

Analysis of protein processing by N-terminal proteomics reveals novel species-specific substrate determinants of granzyme B orthologs.

Van Damme P, Maurer-Stroh S, Plasman K, Van Durme J, Colaert N, Timmerman E, De Bock PJ, Goethals M, Rousseau F, Schymkowitz J, Vandekerckhove J, Gevaert K.

Mol Cell Proteomics. 2009 Feb;8(2):258-72. doi: 10.1074/mcp.M800060-MCP200. Epub 2008 Oct 3.

48.

Peptizer, a tool for assessing false positive peptide identifications and manually validating selected results.

Helsens K, Timmerman E, Vandekerckhove J, Gevaert K, Martens L.

Mol Cell Proteomics. 2008 Dec;7(12):2364-72. doi: 10.1074/mcp.M800082-MCP200. Epub 2008 Jul 30.

49.

Hybrid N-glycans on the host protective activation-associated secreted proteins of Ostertagia ostertagi and their importance in immunogenicity.

Meyvis Y, Callewaert N, Gevaert K, Timmerman E, Van Durme J, Schymkowitz J, Rousseau F, Vercruysse J, Claerebout E, Geldhof P.

Mol Biochem Parasitol. 2008 Sep;161(1):67-71. doi: 10.1016/j.molbiopara.2008.05.004. Epub 2008 May 21. Erratum in: Mol Biochem Parasitol. 2009 Feb;163(2):127.

PMID:
18585797
50.

HyperISGylation of Old World monkey ISG15 in human cells.

Pattyn E, Verhee A, Uyttendaele I, Piessevaux J, Timmerman E, Gevaert K, Vandekerckhove J, Peelman F, Tavernier J.

PLoS One. 2008 Jun 18;3(6):e2427. doi: 10.1371/journal.pone.0002427.

Supplemental Content

Loading ...
Support Center