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Does packed red cell transfusion provide symptomatic benefits to cancer palliative patients?: a longitudinal study from a single private oncology center in Nepal.

Timilsina S, Karki S, Timalsina S, Gautam A, Sharma S.

BMC Palliat Care. 2019 Aug 6;18(1):67. doi: 10.1186/s12904-019-0454-1.


Independent evolution with the gene flux originating from multiple Xanthomonas species explains genomic heterogeneity in Xanthomonas perforans.

Newberry EA, Bhandari R, Minsavage GV, Timilsina S, Jibrin M, Kemble J, Sikora EJ, Jones JB, Potnis N.

Appl Environ Microbiol. 2019 Aug 2. pii: AEM.00885-19. doi: 10.1128/AEM.00885-19. [Epub ahead of print]


Molecular Epidemiology of Xanthomonas perforans Outbreaks in Tomato Plants from Transplant to Field as Determined by Single-Nucleotide Polymorphism Analysis.

Abrahamian P, Timilsina S, Minsavage GV, Potnis N, Jones JB, Goss EM, Vallad GE.

Appl Environ Microbiol. 2019 Aug 29;85(18). pii: e01220-19. doi: 10.1128/AEM.01220-19. Print 2019 Sep 15.


Corrigendum: Inference of Convergent Gene Acquisition Among Pseudomonas syringae Strains Isolated From Watermelon, Cantaloupe, and Squash.

Newberry EA, Ebrahim M, Timilsina S, Zlatković N, Obradović A, Bull CT, Goss EM, Huguet-Tapia JC, Paret ML, Jones JB, Potnis N.

Front Microbiol. 2019 May 3;10:963. doi: 10.3389/fmicb.2019.00963. eCollection 2019.


Identification of biomarkers indicative of functional skeletal stem cells.

Qiryaqoz Z, Timilsina S, Czarnowski D, Krebsbach PH, Villa-Diaz LG.

Orthod Craniofac Res. 2019 May;22 Suppl 1:192-198. doi: 10.1111/ocr.12260.


Phenotypic and Genetic Diversity of Xanthomonas perforans Populations from Tomato in North Carolina.

Adhikari P, Adhikari TB, Timilsina S, Meadows I, Jones JB, Panthee DR, Louws FJ.

Phytopathology. 2019 Sep;109(9):1533-1543. doi: 10.1094/PHYTO-01-19-0019-R. Epub 2019 Aug 5.


Multiple Recombination Events Drive the Current Genetic Structure of Xanthomonas perforans in Florida.

Timilsina S, Pereira-Martin JA, Minsavage GV, Iruegas-Bocardo F, Abrahamian P, Potnis N, Kolaczkowski B, Vallad GE, Goss EM, Jones JB.

Front Microbiol. 2019 Mar 13;10:448. doi: 10.3389/fmicb.2019.00448. eCollection 2019.


An Extremely Inexpensive, Simple, and Flexible Carbon Fiber Electrode for Tunable Elastomeric Piezo-Resistive Sensors and Devices Realized by LSTM RNN.

Cho MY, Lee JH, Kim SH, Kim JS, Timilsina S.

ACS Appl Mater Interfaces. 2019 Mar 27;11(12):11910-11919. doi: 10.1021/acsami.9b00464. Epub 2019 Mar 15.


Inference of Convergent Gene Acquisition Among Pseudomonas syringae Strains Isolated From Watermelon, Cantaloupe, and Squash.

Newberry EA, Ebrahim M, Timilsina S, Zlatković N, Obradović A, Bull CT, Goss EM, Huguet-Tapia JC, Paret ML, Jones JB, Potnis N.

Front Microbiol. 2019 Feb 19;10:270. doi: 10.3389/fmicb.2019.00270. eCollection 2019. Erratum in: Front Microbiol. 2019 May 03;10:963.


Bacterial Gall of Loropetalum chinense caused by Pseudomonas amygdali pv. loropetali pv. nov.

Harmon CL, Timilsina S, Bonkowski J, Jones DD, Sun X, Vallad GE, Sepulveda LR, Bull C, Jones JB.

Plant Dis. 2018 Apr;102(4):799-806. doi: 10.1094/PDIS-04-17-0505-RE. Epub 2018 Feb 2.


Reclassification of Xanthomonas gardneri (ex Šutič 1957) Jones et al. 2006 as a later heterotypic synonym of Xanthomonas cynarae Trébaol et al. 2000 and description of X. cynarae pv. cynarae and X. cynarae pv. gardneri based on whole genome analyses.

Timilsina S, Kara S, Jacques MA, Potnis N, Minsavage GV, Vallad GE, Jones JB, Fischer-Le Saux M.

Int J Syst Evol Microbiol. 2019 Feb;69(2):343-349. doi: 10.1099/ijsem.0.003104. Epub 2018 Nov 20.


MiR-584-5p potentiates vincristine and radiation response by inducing spindle defects and DNA damage in medulloblastoma.

Abdelfattah N, Rajamanickam S, Panneerdoss S, Timilsina S, Yadav P, Onyeagucha BC, Garcia M, Vadlamudi R, Chen Y, Brenner A, Houghton P, Rao MK.

Nat Commun. 2018 Oct 31;9(1):4541. doi: 10.1038/s41467-018-06808-8.


Cross-talk among writers, readers, and erasers of m6A regulates cancer growth and progression.

Panneerdoss S, Eedunuri VK, Yadav P, Timilsina S, Rajamanickam S, Viswanadhapalli S, Abdelfattah N, Onyeagucha BC, Cui X, Lai Z, Mohammad TA, Gupta YK, Huang TH, Huang Y, Chen Y, Rao MK.

Sci Adv. 2018 Oct 3;4(10):eaar8263. doi: 10.1126/sciadv.aar8263. eCollection 2018 Oct.


A bacterial epidemic in wild plants.

Goss EM, Timilsina S.

Nat Ecol Evol. 2018 Oct;2(10):1529-1530. doi: 10.1038/s41559-018-0692-2. No abstract available.


Topological Characterization of Human and Mouse m5C Epitranscriptome Revealed by Bisulfite Sequencing.

Wei Z, Panneerdoss S, Timilsina S, Zhu J, Mohammad TA, Lu ZL, de Magalhães JP, Chen Y, Rong R, Huang Y, Rao MK, Meng J.

Int J Genomics. 2018 Jun 13;2018:1351964. doi: 10.1155/2018/1351964. eCollection 2018.


The Type III Effector AvrBsT Enhances Xanthomonas perforans Fitness in Field-Grown Tomato.

Abrahamian P, Timilsina S, Minsavage GV, Kc S, Goss EM, Jones JB, Vallad GE.

Phytopathology. 2018 Dec;108(12):1355-1362. doi: 10.1094/PHYTO-02-18-0052-R. Epub 2018 Oct 15.


Deep-Learning Technique To Convert a Crude Piezoresistive Carbon Nanotube-Ecoflex Composite Sheet into a Smart, Portable, Disposable, and Extremely Flexible Keypad.

Lee JW, Chung J, Cho MY, Timilsina S, Sohn K, Kim JS, Sohn KS.

ACS Appl Mater Interfaces. 2018 Jun 20;10(24):20862-20868. doi: 10.1021/acsami.8b04914. Epub 2018 Jun 11.


Genomic Inference of Recombination-Mediated Evolution in Xanthomonas euvesicatoria and X. perforans.

Jibrin MO, Potnis N, Timilsina S, Minsavage GV, Vallad GE, Roberts PD, Jones JB, Goss EM.

Appl Environ Microbiol. 2018 Jun 18;84(13). pii: e00136-18. doi: 10.1128/AEM.00136-18. Print 2018 Jul 1.


Design and Rationale for the Veterans Affairs "Cooperative Study Program 594 Comparative Effectiveness in Gout: Allopurinol vs. Febuxostat" Trial.

Timilsina S, Brittan K, O'Dell JR, Brophy M, Davis-Karim A, Henrie AM, Neogi T, Newcomb J, Palevsky PM, Pillinger MH, Pittman D, Taylor TH, Wu H, Mikuls TR.

Contemp Clin Trials. 2018 May;68:102-108. doi: 10.1016/j.cct.2018.03.015. Epub 2018 Mar 27.


Correlation between maternal and umbilical cord blood in pregnant women of Pokhara Valley: a cross sectional study.

Timilsina S, Karki S, Gautam A, Bhusal P, Paudel G, Sharma D.

BMC Pregnancy Childbirth. 2018 Mar 21;18(1):70. doi: 10.1186/s12884-018-1697-1.


Application of Discrete-Choice Experiment Methods in Tobacco Control: A Systematic Review.

Regmi K, Kaphle D, Timilsina S, Tuha NAA.

Pharmacoecon Open. 2018 Mar;2(1):5-17. doi: 10.1007/s41669-017-0025-4. Review.


Novel post-transcriptional and post-translational regulation of pro-apoptotic protein BOK and anti-apoptotic protein Mcl-1 determine the fate of breast cancer cells to survive or die.

Onyeagucha B, Subbarayalu P, Abdelfattah N, Rajamanickam S, Timilsina S, Guzman R, Zeballos C, Eedunuri V, Bansal S, Mohammad T, Chen Y, Vadlamudi RK, Rao MK.

Oncotarget. 2017 Sep 12;8(49):85984-85996. doi: 10.18632/oncotarget.20841. eCollection 2017 Oct 17.


Pseudomonas floridensis sp. nov., a bacterial pathogen isolated from tomato.

Timilsina S, Minsavage GV, Preston J, Newberry EA, Paret ML, Goss EM, Jones JB, Vallad GE.

Int J Syst Evol Microbiol. 2018 Jan;68(1):64-70. doi: 10.1099/ijsem.0.002445. Epub 2017 Nov 17.


Downregulation of KCNMB4 expression and changes in BK channel subtype in hippocampal granule neurons following seizure activity.

Whitmire LE, Ling L, Bugay V, Carver CM, Timilsina S, Chuang HH, Jaffe DB, Shapiro MS, Cavazos JE, Brenner R.

PLoS One. 2017 Nov 16;12(11):e0188064. doi: 10.1371/journal.pone.0188064. eCollection 2017.


Cross-talk between miR-471-5p and autophagy component proteins regulates LC3-associated phagocytosis (LAP) of apoptotic germ cells.

Panneerdoss S, Viswanadhapalli S, Abdelfattah N, Onyeagucha BC, Timilsina S, Mohammad TA, Chen Y, Drake M, Vuori K, Kumar TR, Rao MK.

Nat Commun. 2017 Sep 19;8(1):598. doi: 10.1038/s41467-017-00590-9.


An extremely simple macroscale electronic skin realized by deep machine learning.

Sohn KS, Chung J, Cho MY, Timilsina S, Park WB, Pyo M, Shin N, Sohn K, Kim JS.

Sci Rep. 2017 Sep 11;7(1):11061. doi: 10.1038/s41598-017-11663-6.


A Novel Phylogroup of Pseudomonas cichorii Identified Following an Unusual Disease Outbreak on Tomato.

Timilsina S, Adkison H, Testen AL, Newberry EA, Miller SA, Paret ML, Minsavage GV, Goss EM, Jones JB, Vallad GE.

Phytopathology. 2017 Nov;107(11):1298-1304. doi: 10.1094/PHYTO-05-17-0178-R. Epub 2017 Aug 15.


Whole-Genome Sequences of Xanthomonas euvesicatoria Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors.

Barak JD, Vancheva T, Lefeuvre P, Jones JB, Timilsina S, Minsavage GV, Vallad GE, Koebnik R.

Front Plant Sci. 2016 Dec 9;7:1805. doi: 10.3389/fpls.2016.01805. eCollection 2016.


A Mechanoluminescent ZnS:Cu/Rhodamine/SiO2/PDMS and Piezoresistive CNT/PDMS Hybrid Sensor: Red-Light Emission and a Standardized Strain Quantification.

Sohn KS, Timilsina S, Singh SP, Lee JW, Kim JS.

ACS Appl Mater Interfaces. 2016 Dec 21;8(50):34777-34783. doi: 10.1021/acsami.6b12931. Epub 2016 Dec 6.


A Multiplex Real-Time PCR Assay Differentiates Four Xanthomonas Species Associated with Bacterial Spot of Tomato.

Strayer AL, Jeyaprakash A, Minsavage GV, Timilsina S, Vallad GE, Jones JB, Paret ML.

Plant Dis. 2016 Aug;100(8):1660-1668. doi: 10.1094/PDIS-09-15-1085-RE. Epub 2016 May 12.


Analysis of Sequenced Genomes of Xanthomonas perforans Identifies Candidate Targets for Resistance Breeding in Tomato.

Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM.

Phytopathology. 2016 Oct;106(10):1097-1104. Epub 2016 Aug 11.


Inhibition of FoxM1-Mediated DNA Repair by Imipramine Blue Suppresses Breast Cancer Growth and Metastasis.

Rajamanickam S, Panneerdoss S, Gorthi A, Timilsina S, Onyeagucha B, Kovalskyy D, Ivanov D, Hanes MA, Vadlamudi RK, Chen Y, Bishop AJ, Arbiser JL, Rao MK.

Clin Cancer Res. 2016 Jul 15;22(14):3524-36. doi: 10.1158/1078-0432.CCR-15-2535. Epub 2016 Feb 29.


Serological Assessment for Leishmania donovani Infection in Blood Donors of Sunsari District, Dharan, Nepal.

Timilsina S, Raj Bhattarai N, Khanal B, Rijal S.

Indian J Hematol Blood Transfus. 2016 Mar;32(1):95-9. doi: 10.1007/s12288-015-0505-6. Epub 2015 Jan 18.


Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity.

Schwartz AR, Potnis N, Timilsina S, Wilson M, Patané J, Martins J Jr, Minsavage GV, Dahlbeck D, Akhunova A, Almeida N, Vallad GE, Barak JD, White FF, Miller SA, Ritchie D, Goss E, Bart RS, Setubal JC, Jones JB, Staskawicz BJ.

Front Microbiol. 2015 Jun 3;6:535. doi: 10.3389/fmicb.2015.00535. eCollection 2015.


Multilocus Sequence Analysis Reveals Genetic Diversity in Xanthomonads Associated With Poinsettia Production.

Rockey W, Potnis N, Timilsina S, Hong JC, Vallad GE, Jones JB, Norman DJ.

Plant Dis. 2015 Jun;99(6):874-882. doi: 10.1094/PDIS-08-14-0867-RE. Epub 2015 Jun 11.


First Report of Atypical Xanthomonas euvesicatoria Strains Causing Bacterial Spot of Tomato in Nigeria.

Jibrin MO, Timilsina S, Potnis N, Minsavage GV, Shenge KC, Akpa AD, Alegbejo MD, Beed F, Vallad GE, Jones JB.

Plant Dis. 2015 Mar;99(3):415. doi: 10.1094/PDIS-09-14-0952-PDN.


Bacterial spot of tomato and pepper: diverse Xanthomonas species with a wide variety of virulence factors posing a worldwide challenge.

Potnis N, Timilsina S, Strayer A, Shantharaj D, Barak JD, Paret ML, Vallad GE, Jones JB.

Mol Plant Pathol. 2015 Dec;16(9):907-20. doi: 10.1111/mpp.12244. Epub 2015 Apr 29.


Multilocus sequence analysis of xanthomonads causing bacterial spot of tomato and pepper plants reveals strains generated by recombination among species and recent global spread of Xanthomonas gardneri.

Timilsina S, Jibrin MO, Potnis N, Minsavage GV, Kebede M, Schwartz A, Bart R, Staskawicz B, Boyer C, Vallad GE, Pruvost O, Jones JB, Goss EM.

Appl Environ Microbiol. 2015 Feb;81(4):1520-9.


First Report of Xanthomonas euvesicatoria Causing Bacterial Spot Disease in Pepper in Northwestern Nigeria.

Jibrin MO, Timilsina S, Potnis N, Minsavage GV, Shenge KC, Akpa AD, Alegbejo MD, Beed F, Vallad GE, Jones JB.

Plant Dis. 2014 Oct;98(10):1426. doi: 10.1094/PDIS-06-14-0586-PDN.


Tobacco and alcohol: the relation to pulmonary tuberculosis in household contacts.

Gyawali N, Gurung R, Poudyal N, Amatya R, Shrestha R, Khanal LK, Timilsina S, Bhattacharya SK.

Nepal Med Coll J. 2013 Jun;15(2):125-8.


Mechanoluminescence of SrAl2O4:Eu(+), Dy(3+) under cyclic loading.

Sohn KS, Park WB, Timilsina S, Kim JS.

Opt Lett. 2014 Mar 15;39(6):1410-3. doi: 10.1364/OL.39.001410.


Social and behavioural risk factors for HIV infection among the wives of labour migrants in Nepal.

Thapa S, Bista N, Timilsina S, Buntinx F, Mathei C.

Int J STD AIDS. 2014 Oct;25(11):793-9. doi: 10.1177/0956462414521162. Epub 2014 Jan 27.


Invasive mould disease involving the gastrointestinal tract caused by Neosartorya pseudofischeri in a haematological patient.

Toskova M, Palousova D, Kocmanova I, Pavlovsky Z, Timilsina S, Lengerova M, Mayer J, Racil Z.

Mycoses. 2013 May;56(3):385-8. doi: 10.1111/myc.12038. Epub 2013 Jan 29. No abstract available.


Micafungin as empirical antifungal therapy in hematological patients: a retrospective, multicenter study in the Czech and Slovak Republics.

Racil Z, Toskova M, Kocmanova I, Buresova L, Kouba M, Drgona L, Masarova L, Guman T, Tothova E, Gabzdilova J, Forsterova K, Haber J, Ziakova B, Bojtarova E, Rolencova M, Timilsina S, Cetkovsky P, Mayer J.

Leuk Lymphoma. 2013 May;54(5):1042-7. doi: 10.3109/10428194.2012.729057. Epub 2012 Nov 15.


Quantitative detection of IDH2 mutation for minimal residual disease monitoring in patients with acute myeloid leukemia and its comparison with mutations in NPM1 gene.

Jeziskova I, Razga F, Toskova M, Dvorakova D, Timilsina S, Mayer J, Racil Z.

Leuk Lymphoma. 2013 Apr;54(4):867-70. doi: 10.3109/10428194.2012.727414. Epub 2012 Sep 28. No abstract available.


Reactivity of the 1,3-β-D-glucan assay during bacteraemia: limited evidence from a prospective study.

Racil Z, Kocmanova I, Toskova M, Winterova J, Lengerova M, Timilsina S, Mayer J.

Mycoses. 2013 Mar;56(2):101-4. doi: 10.1111/j.1439-0507.2012.02210.x. Epub 2012 May 18.


Monitoring trough voriconazole plasma concentrations in haematological patients: real life multicentre experience.

Racil Z, Winterova J, Kouba M, Zak P, Malaskova L, Buresova L, Toskova M, Lengerova M, Kocmanova I, Weinbergerova B, Timilsina S, Rolencova M, Cetkovsky P, Mayer J.

Mycoses. 2012 Nov;55(6):483-92. doi: 10.1111/j.1439-0507.2012.02186.x. Epub 2012 Mar 19.


Treatment of molecular relapse in patients with acute myeloid leukemia using clofarabine monotherapy.

Racil Z, Toskova M, Dvorakova D, Jeziskova I, Razga F, Buresova L, Timilsina S, Mayer J.

Am J Hematol. 2012 Feb;87(2):211-3. doi: 10.1002/ajh.22213. Epub 2011 Nov 4.


Clinical and laboratory features of leukemias at the time of diagnosis: an analysis of 1,004 consecutive patients.

Racil Z, Buresova L, Brejcha M, Prochazkova J, Zounar R, Timilsina S, Razga F, Toskova M, Cetkovsky P, Mayer J.

Am J Hematol. 2011 Sep;86(9):800-3. doi: 10.1002/ajh.22100. Epub 2011 Aug 2. No abstract available.

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