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Items: 1 to 50 of 94

1.

13C and 15N NMR identification of product compound classes from aqueous and solid phase photodegradation of 2,4,6-trinitrotoluene.

Thorn KA.

PLoS One. 2019 Oct 22;14(10):e0224112. doi: 10.1371/journal.pone.0224112. eCollection 2019.

2.

Genetic variations in A20 DUB domain provide a genetic link to citrullination and neutrophil extracellular traps in systemic lupus erythematosus.

Odqvist L, Jevnikar Z, Riise R, Öberg L, Rhedin M, Leonard D, Yrlid L, Jackson S, Mattsson J, Nanda S, Cohen P, Knebel A, Arthur S, Thörn K, Svenungsson E, Jönsen A, Gunnarsson I, Tandre K, Alexsson A, Kastbom A, Rantapää-Dahlqvist S, Eloranta ML, Syvänen AC, Bengtsson A, Johansson P, Sandling JK, Sjöwall C, Rönnblom L, Collins B, Vaarala O.

Ann Rheum Dis. 2019 Oct;78(10):1363-1370. doi: 10.1136/annrheumdis-2019-215434. Epub 2019 Jul 12.

3.

Quantitative mapping of protein-peptide affinity landscapes using spectrally encoded beads.

Nguyen HQ, Roy J, Harink B, Damle NP, Latorraca NR, Baxter BC, Brower K, Longwell SA, Kortemme T, Thorn KS, Cyert MS, Fordyce PM.

Elife. 2019 Jul 8;8. pii: e40499. doi: 10.7554/eLife.40499.

4.

An open-source software analysis package for Microspheres with Ratiometric Barcode Lanthanide Encoding (MRBLEs).

Harink B, Nguyen H, Thorn K, Fordyce P.

PLoS One. 2019 Mar 22;14(3):e0203725. doi: 10.1371/journal.pone.0203725. eCollection 2019.

5.

Activation of group 2 innate lymphoid cells after allergen challenge in asthmatic patients.

Winkler C, Hochdörfer T, Israelsson E, Hasselberg A, Cavallin A, Thörn K, Muthas D, Shojaee S, Lüer K, Müller M, Mjösberg J, Vaarala O, Hohlfeld J, Pardali K.

J Allergy Clin Immunol. 2019 Jul;144(1):61-69.e7. doi: 10.1016/j.jaci.2019.01.027. Epub 2019 Feb 4.

PMID:
30731124
6.

Sirtilins - the new old members of the vitamin K-dependent coagulation factor family.

Dahms SO, Demir F, Huesgen PF, Thorn K, Brandstetter H.

J Thromb Haemost. 2019 Mar;17(3):470-481. doi: 10.1111/jth.14384. Epub 2019 Feb 13.

7.

Evaluation of the effects of an oral notch inhibitor, crenigacestat (LY3039478), on QT interval, and bioavailability studies conducted in healthy subjects.

Yuen E, Posada M, Smith C, Thorn K, Greenwood D, Burgess M, A Benhadji K, Ortega D, Chinchen L, Suico J.

Cancer Chemother Pharmacol. 2019 Mar;83(3):483-492. doi: 10.1007/s00280-018-3750-1. Epub 2018 Dec 11.

PMID:
30539232
8.

Efficient and tunable spectral compression using frequency-domain nonlinear optics.

Thorn KE, Monahan NR, Prasad SKK, Chen K, Hodgkiss JM.

Opt Express. 2018 Oct 15;26(21):28140-28149. doi: 10.1364/OE.26.028140.

PMID:
30469869
9.

Cytokine production by activated plasmacytoid dendritic cells and natural killer cells is suppressed by an IRAK4 inhibitor.

Hjorton K, Hagberg N, Israelsson E, Jinton L, Berggren O, Sandling JK, Thörn K, Mo J; DISSECT consortium, Eloranta ML, Rönnblom L.

Arthritis Res Ther. 2018 Oct 24;20(1):238. doi: 10.1186/s13075-018-1702-0.

10.

Extending chemical perturbations of the ubiquitin fitness landscape in a classroom setting reveals new constraints on sequence tolerance.

Mavor D, Barlow KA, Asarnow D, Birman Y, Britain D, Chen W, Green EM, Kenner LR, Mensa B, Morinishi LS, Nelson CA, Poss EM, Suresh P, Tian R, Arhar T, Ary BE, Bauer DP, Bergman ID, Brunetti RM, Chio CM, Dai SA, Dickinson MS, Elledge SK, Helsell CVM, Hendel NL, Kang E, Kern N, Khoroshkin MS, Kirkemo LL, Lewis GR, Lou K, Marin WM, Maxwell AM, McTigue PF, Myers-Turnbull D, Nagy TL, Natale AM, Oltion K, Pourmal S, Reder GK, Rettko NJ, Rohweder PJ, Schwarz DMC, Tan SK, Thomas PV, Tibble RW, Town JP, Tsai MK, Ugur FS, Wassarman DR, Wolff AM, Wu TS, Bogdanoff D, Li J, Thorn KS, O'Conchúir S, Swaney DL, Chow ED, Madhani HD, Redding S, Bolon DN, Kortemme T, DeRisi JL, Kampmann M, Fraser JS.

Biol Open. 2018 Jul 23;7(7). pii: bio036103. doi: 10.1242/bio.036103.

11.

Epithelial IL-6 trans-signaling defines a new asthma phenotype with increased airway inflammation.

Jevnikar Z, Östling J, Ax E, Calvén J, Thörn K, Israelsson E, Öberg L, Singhania A, Lau LCK, Wilson SJ, Ward JA, Chauhan A, Sousa AR, De Meulder B, Loza MJ, Baribaud F, Sterk PJ, Chung KF, Sun K, Guo Y, Adcock IM, Payne D, Dahlen B, Chanez P, Shaw DE, Krug N, Hohlfeld JM, Sandström T, Djukanovic R, James A, Hinks TSC, Howarth PH, Vaarala O, van Geest M, Olsson H; Unbiased Biomarkers in Prediction of Respiratory Disease Outcomes study group.

J Allergy Clin Immunol. 2019 Feb;143(2):577-590. doi: 10.1016/j.jaci.2018.05.026. Epub 2018 Jun 11.

12.

Programmable Microfluidic Synthesis of Over One Thousand Uniquely Identifiable Spectral Codes.

Nguyen HQ, Baxter BC, Brower K, Diaz-Botia CA, DeRisi JL, Fordyce PM, Thorn KS.

Adv Opt Mater. 2017 Feb 2;5(3). pii: 1600548. doi: 10.1002/adom.201600548. Epub 2016 Oct 18.

13.

Extracts of Equisetum giganteum L and Copaifera reticulate Ducke show strong antiviral activity against the sexually transmitted pathogen herpes simplex virus type 2.

Churqui MP, Lind L, Thörn K, Svensson A, Savolainen O, Aranda KT, Eriksson K.

J Ethnopharmacol. 2018 Jan 10;210:192-197. doi: 10.1016/j.jep.2017.08.010. Epub 2017 Aug 12.

PMID:
28807852
14.

A BaSiC tool for background and shading correction of optical microscopy images.

Peng T, Thorn K, Schroeder T, Wang L, Theis FJ, Marr C, Navab N.

Nat Commun. 2017 Jun 8;8:14836. doi: 10.1038/ncomms14836.

15.

Genetically encoded fluorescent tags.

Thorn K.

Mol Biol Cell. 2017 Apr 1;28(7):848-857. doi: 10.1091/mbc.E16-07-0504.

16.

α-Synuclein promotes dilation of the exocytotic fusion pore.

Logan T, Bendor J, Toupin C, Thorn K, Edwards RH.

Nat Neurosci. 2017 May;20(5):681-689. doi: 10.1038/nn.4529. Epub 2017 Mar 13.

17.

Nasal Immunization Confers High Avidity Neutralizing Antibody Response and Immunity to Primary and Recurrent Genital Herpes in Guinea Pigs.

Persson J, Zhang Y, Olafsdottir TA, Thörn K, Cairns TM, Wegmann F, Sattentau QJ, Eisenberg RJ, Cohen GH, Harandi AM.

Front Immunol. 2016 Dec 26;7:640. doi: 10.3389/fimmu.2016.00640. eCollection 2016.

18.

Thymic exosomes promote the final maturation of thymocytes.

Lundberg V, Berglund M, Skogberg G, Lindgren S, Lundqvist C, Gudmundsdottir J, Thörn K, Telemo E, Ekwall O.

Sci Rep. 2016 Nov 8;6:36479. doi: 10.1038/srep36479.

19.

Crude Oil Metabolites in Groundwater at Two Spill Sites.

Bekins BA, Cozzarelli IM, Erickson ML, Steenson RA, Thorn KA.

Ground Water. 2016 Sep;54(5):681-691. doi: 10.1111/gwat.12419. Epub 2016 Mar 24.

PMID:
27010754
20.

A Novel Model of Asymptomatic Plasmodium Parasitemia That Recapitulates Elements of the Human Immune Response to Chronic Infection.

Fontana MF, Baccarella A, Craft JF, Boyle MJ, McIntyre TI, Wood MD, Thorn KS, Anidi C, Bayat A, Chung MR, Hamburger R, Kim CY, Pearman E, Pham J, Tang JJ, Boon L, Kamya MR, Dorsey G, Feeney ME, Kim CC.

PLoS One. 2016 Sep 1;11(9):e0162132. doi: 10.1371/journal.pone.0162132. eCollection 2016.

21.

Molecular-level evidence provided by ultrahigh resolution mass spectrometry for oil-derived doc in groundwater at Bemidji, Minnesota.

Islam A, Ahmed A, Hur M, Thorn K, Kim S.

J Hazard Mater. 2016 Dec 15;320:123-132. doi: 10.1016/j.jhazmat.2016.08.018. Epub 2016 Aug 8.

PMID:
27526278
22.

Nitrosation and Nitration of Fulvic Acid, Peat and Coal with Nitric Acid.

Thorn KA, Cox LG.

PLoS One. 2016 May 13;11(5):e0154981. doi: 10.1371/journal.pone.0154981. eCollection 2016.

23.

Determination of ubiquitin fitness landscapes under different chemical stresses in a classroom setting.

Mavor D, Barlow K, Thompson S, Barad BA, Bonny AR, Cario CL, Gaskins G, Liu Z, Deming L, Axen SD, Caceres E, Chen W, Cuesta A, Gate RE, Green EM, Hulce KR, Ji W, Kenner LR, Mensa B, Morinishi LS, Moss SM, Mravic M, Muir RK, Niekamp S, Nnadi CI, Palovcak E, Poss EM, Ross TD, Salcedo EC, See SK, Subramaniam M, Wong AW, Li J, Thorn KS, Conchúir SÓ, Roscoe BP, Chow ED, DeRisi JL, Kortemme T, Bolon DN, Fraser JS.

Elife. 2016 Apr 25;5. pii: e15802. doi: 10.7554/eLife.15802.

24.

A quick guide to light microscopy in cell biology.

Thorn K.

Mol Biol Cell. 2016 Jan 15;27(2):219-22. doi: 10.1091/mbc.E15-02-0088.

25.

Probing the Carbonyl Functionality of a Petroleum Resin and Asphaltene through Oximation and Schiff Base Formation in Conjunction with N-15 NMR.

Thorn KA, Cox LG.

PLoS One. 2015 Nov 10;10(11):e0142452. doi: 10.1371/journal.pone.0142452. eCollection 2015.

26.

Near universal detection of alterations in CTNNB1 and Wnt pathway regulators in desmoid-type fibromatosis by whole-exome sequencing and genomic analysis.

Crago AM, Chmielecki J, Rosenberg M, O'Connor R, Byrne C, Wilder FG, Thorn K, Agius P, Kuk D, Socci ND, Qin LX, Meyerson M, Hameed M, Singer S.

Genes Chromosomes Cancer. 2015 Oct;54(10):606-15. doi: 10.1002/gcc.22272. Epub 2015 Jul 14.

27.

Correction: Programmable microfluidic synthesis of spectrally encoded microspheres.

Gerver RE, Gómez-Sjöberg R, Baxter BC, Thorn KS, Fordyce PM, Diaz-Botia CA, Helms BA, DeRisi JL.

Lab Chip. 2015 Feb 21;15(4):1213. doi: 10.1039/c5lc90018b.

PMID:
25619960
28.

The cancer glycocalyx mechanically primes integrin-mediated growth and survival.

Paszek MJ, DuFort CC, Rossier O, Bainer R, Mouw JK, Godula K, Hudak JE, Lakins JN, Wijekoon AC, Cassereau L, Rubashkin MG, Magbanua MJ, Thorn KS, Davidson MW, Rugo HS, Park JW, Hammer DA, Giannone G, Bertozzi CR, Weaver VM.

Nature. 2014 Jul 17;511(7509):319-25. doi: 10.1038/nature13535. Epub 2014 Jun 25.

29.

The secretion of IL-6 by CpG-ODN-treated cancer cells promotes T-cell immune responses partly through the TLR-9/AP-1 pathway in oral squamous cell carcinoma.

Ruan M, Thorn K, Liu S, Li S, Yang W, Zhang C, Zhang C.

Int J Oncol. 2014 Jun;44(6):2103-10. doi: 10.3892/ijo.2014.2356. Epub 2014 Mar 21.

PMID:
24676671
30.

High-resolution imaging of cardiomyocyte behavior reveals two distinct steps in ventricular trabeculation.

Staudt DW, Liu J, Thorn KS, Stuurman N, Liebling M, Stainier DY.

Development. 2014 Feb;141(3):585-93. doi: 10.1242/dev.098632. Epub 2014 Jan 8.

31.

A neo-substrate that amplifies catalytic activity of parkinson's-disease-related kinase PINK1.

Hertz NT, Berthet A, Sos ML, Thorn KS, Burlingame AL, Nakamura K, Shokat KM.

Cell. 2013 Aug 15;154(4):737-47. doi: 10.1016/j.cell.2013.07.030.

32.

Improved blue, green, and red fluorescent protein tagging vectors for S. cerevisiae.

Lee S, Lim WA, Thorn KS.

PLoS One. 2013 Jul 2;8(7):e67902. doi: 10.1371/journal.pone.0067902. Print 2013.

33.

Mitochondrial network size scaling in budding yeast.

Rafelski SM, Viana MP, Zhang Y, Chan YH, Thorn KS, Yam P, Fung JC, Li H, Costa Lda F, Marshall WF.

Science. 2012 Nov 9;338(6108):822-4. doi: 10.1126/science.1225720.

34.

Programmable microfluidic synthesis of spectrally encoded microspheres.

Gerver RE, Gómez-Sjöberg R, Baxter BC, Thorn KS, Fordyce PM, Diaz-Botia CA, Helms BA, DeRisi JL.

Lab Chip. 2012 Nov 21;12(22):4716-23. doi: 10.1039/c2lc40699c. Erratum in: Lab Chip. 2015 Feb 21;15(4):1213.

PMID:
23042484
35.

[Response to criticism on guidelines for prehospital care in head injury: Guidelines exist--and they are followed].

Thörn K, Blomberg T, Victorén AA, Silfverstolpe J, Orninge P, Levein NG, Lindberg S, Högberg H, Ahlstedt B, Eriksson B.

Lakartidningen. 2012 Sep 5-11;109(36):1557-8; author reply 1558. Swedish. No abstract available.

PMID:
23016242
36.

The first World Cell Race.

Maiuri P, Terriac E, Paul-Gilloteaux P, Vignaud T, McNally K, Onuffer J, Thorn K, Nguyen PA, Georgoulia N, Soong D, Jayo A, Beil N, Beneke J, Lim JC, Sim CP, Chu YS; WCR participants, Jiménez-Dalmaroni A, Joanny JF, Thiery JP, Erfle H, Parsons M, Mitchison TJ, Lim WA, Lennon-Duménil AM, Piel M, Théry M.

Curr Biol. 2012 Sep 11;22(17):R673-5. doi: 10.1016/j.cub.2012.07.052. No abstract available. Erratum in: Curr Biol. 2013 Jan 7;23(1):97.

37.

Regulation of endocytic clathrin dynamics by cargo ubiquitination.

Henry AG, Hislop JN, Grove J, Thorn K, Marsh M, von Zastrow M.

Dev Cell. 2012 Sep 11;23(3):519-32. doi: 10.1016/j.devcel.2012.08.003. Epub 2012 Aug 30.

38.

Separase biosensor reveals that cohesin cleavage timing depends on phosphatase PP2A(Cdc55) regulation.

Yaakov G, Thorn K, Morgan DO.

Dev Cell. 2012 Jul 17;23(1):124-36. doi: 10.1016/j.devcel.2012.06.007.

39.

Scanning angle interference microscopy reveals cell dynamics at the nanoscale.

Paszek MJ, DuFort CC, Rubashkin MG, Davidson MW, Thorn KS, Liphardt JT, Weaver VM.

Nat Methods. 2012 Jul 1;9(8):825-7. doi: 10.1038/nmeth.2077.

40.

Nasal and skin delivery of IC31(®)-adjuvanted recombinant HSV-2 gD protein confers protection against genital herpes.

Wizel B, Persson J, Thörn K, Nagy E, Harandi AM.

Vaccine. 2012 Jun 19;30(29):4361-8. doi: 10.1016/j.vaccine.2012.02.019.

PMID:
22682292
41.

Ultraviolet irradiation effects incorporation of nitrate and nitrite nitrogen into aquatic natural organic matter.

Thorn KA, Cox LG.

J Environ Qual. 2012 May-Jun;41(3):865-81. doi: 10.2134/jeq2011.0335.

PMID:
22565268
42.

Detection of Streptococcus pneumoniae carriage by the Binax NOW test with nasal and nasopharyngeal swabs in young children.

Vuorenoja K, Jalava J, Lindholm L, Tähtinen PA, Laine MK, Thorn K, Ruohola A.

Eur J Clin Microbiol Infect Dis. 2012 May;31(5):703-6. doi: 10.1007/s10096-011-1361-4. Epub 2011 Jul 30.

PMID:
21800217
43.

Binding of α,α-disubstituted amino acids to arginase suggests new avenues for inhibitor design.

Ilies M, Di Costanzo L, Dowling DP, Thorn KJ, Christianson DW.

J Med Chem. 2011 Aug 11;54(15):5432-43. doi: 10.1021/jm200443b. Epub 2011 Jul 18.

44.

Merkel cell carcinoma in Western Australia: a population-based study of incidence and survival.

Girschik J, Thorn K, Beer TW, Heenan PJ, Fritschi L.

Br J Dermatol. 2011 Nov;165(5):1051-7. doi: 10.1111/j.1365-2133.2011.10493.x. Epub 2011 Sep 29.

PMID:
21711338
45.

The tandem chain extension aldol reaction used for synthesis of ketomethylene tripeptidomimetics targeting hPEPT1.

Thorn K, Nielsen CU, Jakobsen P, Steffansen B, Zercher CK, Begtrup M.

Bioorg Med Chem Lett. 2011 Aug 1;21(15):4597-601. doi: 10.1016/j.bmcl.2011.05.108. Epub 2011 Jun 6.

46.

Unraveling molecular signatures of immunostimulatory adjuvants in the female genital tract through systems biology.

Lindqvist M, Nookaew I, Brinkenberg I, Samuelson E, Thörn K, Nielsen J, Harandi AM.

PLoS One. 2011;6(6):e20448. doi: 10.1371/journal.pone.0020448. Epub 2011 Jun 7.

47.

Sequence-dependent sorting of recycling proteins by actin-stabilized endosomal microdomains.

Puthenveedu MA, Lauffer B, Temkin P, Vistein R, Carlton P, Thorn K, Taunton J, Weiner OD, Parton RG, von Zastrow M.

Cell. 2010 Nov 24;143(5):761-73. doi: 10.1016/j.cell.2010.10.003.

48.

Spinning-disk confocal microscopy of yeast.

Thorn K.

Methods Enzymol. 2010;470:581-602. doi: 10.1016/S0076-6879(10)70023-9. Epub 2010 Mar 1.

PMID:
20946826
49.

Reduced levels of SCD1 accentuate palmitate-induced stress in insulin-producing β-cells.

Thörn K, Hovsepyan M, Bergsten P.

Lipids Health Dis. 2010 Sep 29;9:108. doi: 10.1186/1476-511X-9-108.

50.

Order of functionality loss during photodegradation of aquatic humic substances.

Thorn KA, Younger SJ, Cox LG.

J Environ Qual. 2010 Jul-Aug;39(4):1416-28.

PMID:
20830929

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