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Items: 1 to 50 of 201

1.

Nucleoside Analogues as Antibacterial Agents.

Thomson JM, Lamont IL.

Front Microbiol. 2019 May 22;10:952. doi: 10.3389/fmicb.2019.00952. eCollection 2019. Review.

2.

Developing a Visual Attention Assessment for Children at School Entry.

Prieler T, Wood C, Thomson JM.

Front Psychol. 2018 Dec 7;9:2496. doi: 10.3389/fpsyg.2018.02496. eCollection 2018.

3.

Evaluating sample size to estimate genetic management metrics in the genomics era.

Flesch EP, Rotella JJ, Thomson JM, Graves TA, Garrott RA.

Mol Ecol Resour. 2018 Jun 1. doi: 10.1111/1755-0998.12898. [Epub ahead of print]

PMID:
29856123
4.

Genetic Markers Are Associated with the Ruminal Microbiome and Metabolome in Grain and Sugar Challenged Dairy Heifers.

Golder HM, Thomson JM, Denman SE, McSweeney CS, Lean IJ.

Front Genet. 2018 Feb 27;9:62. doi: 10.3389/fgene.2018.00062. eCollection 2018.

5.

Rhythm production at school entry as a predictor of poor reading and spelling at the end of first grade.

Lundetræ K, Thomson JM.

Read Writ. 2018;31(1):215-237. doi: 10.1007/s11145-017-9782-9. Epub 2017 Oct 23.

6.

Mercaptopurine versus placebo to prevent recurrence of Crohn's disease after surgical resection (TOPPIC): a multicentre, double-blind, randomised controlled trial.

Mowat C, Arnott I, Cahill A, Smith M, Ahmad T, Subramanian S, Travis S, Morris J, Hamlin J, Dhar A, Nwokolo C, Edwards C, Creed T, Bloom S, Yousif M, Thomas L, Campbell S, Lewis SJ, Sebastian S, Sen S, Lal S, Hawkey C, Murray C, Cummings F, Goh J, Lindsay JO, Arebi N, Potts L, McKinley AJ, Thomson JM, Todd JA, Collie M, Dunlop MG, Mowat A, Gaya DR, Winter J, Naismith GD, Ennis H, Keerie C, Lewis S, Prescott RJ, Kennedy NA, Satsangi J; TOPPIC Study Group.

Lancet Gastroenterol Hepatol. 2016 Dec;1(4):273-282. doi: 10.1016/S2468-1253(16)30078-4. Epub 2016 Aug 30.

7.

The Effects of Visual Attention Span and Phonological Decoding in Reading Comprehension in Dyslexia: A Path Analysis.

Chen C, Schneps MH, Masyn KE, Thomson JM.

Dyslexia. 2016 Nov;22(4):322-344. doi: 10.1002/dys.1543. Epub 2016 Oct 14.

8.

Immediate memory and electrophysiologic effects of prefrontal cortex transcranial direct current stimulation on neurotypical individuals and individuals with chronic traumatic brain injury: a pilot study.

O'Neil-Pirozzi TM, Doruk D, Thomson JM, Fregni F.

Int J Neurosci. 2017 Jul;127(7):592-600. doi: 10.1080/00207454.2016.1216415. Epub 2016 Aug 30.

9.

Invited review: Recommendations for reporting intervention studies on reproductive performance in dairy cattle: Improving design, analysis, and interpretation of research on reproduction.

Lean IJ, Lucy MC, McNamara JP, Bradford BJ, Block E, Thomson JM, Morton JM, Celi P, Rabiee AR, Santos JE, Thatcher WW, LeBlanc SJ.

J Dairy Sci. 2016 Jan;99(1):1-17. doi: 10.3168/jds.2015-9445. Epub 2015 Sep 18. Review.

10.

Determining adsorbate configuration on alumina surfaces with (13)C nuclear magnetic resonance relaxation time analysis.

Vecino PA, Huang Z, Mitchell J, McGregor J, Daly H, Hardacre C, Thomson JM, Gladden LF.

Phys Chem Chem Phys. 2015 Aug 28;17(32):20830-9. doi: 10.1039/c5cp02436f. Epub 2015 Jul 27.

11.

Transcranial direct current stimulation modulates efficiency of reading processes.

Thomson JM, Doruk D, Mascio B, Fregni F, Cerruti C.

Front Hum Neurosci. 2015 Mar 16;9:114. doi: 10.3389/fnhum.2015.00114. eCollection 2015.

12.

The use of blood lactate concentration as an indicator of temperament and its impact on growth rate and tenderness of steaks from Simmental × Angus steers.

Boles JA, Kohlbeck KS, Meyers MC, Perz KA, Davis KC, Thomson JM.

Meat Sci. 2015 May;103:68-74. doi: 10.1016/j.meatsci.2015.01.003. Epub 2015 Jan 12.

PMID:
25625941
13.

The fungal microbiota of de-novo paediatric inflammatory bowel disease.

Mukhopadhya I, Hansen R, Meharg C, Thomson JM, Russell RK, Berry SH, El-Omar EM, Hold GL.

Microbes Infect. 2015 Apr;17(4):304-10. doi: 10.1016/j.micinf.2014.12.001. Epub 2014 Dec 15.

14.

DNA polymerases engineered by directed evolution to incorporate non-standard nucleotides.

Laos R, Thomson JM, Benner SA.

Front Microbiol. 2014 Oct 31;5:565. doi: 10.3389/fmicb.2014.00565. eCollection 2014. Review.

15.

Auditory temporal processing skills in musicians with dyslexia.

Bishop-Liebler P, Welch G, Huss M, Thomson JM, Goswami U.

Dyslexia. 2014 Aug;20(3):261-79. doi: 10.1002/dys.1479.

PMID:
25044949
16.

The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing.

Kennedy NA, Walker AW, Berry SH, Duncan SH, Farquarson FM, Louis P, Thomson JM; UK IBD Genetics Consortium, Satsangi J, Flint HJ, Parkhill J, Lees CW, Hold GL.

PLoS One. 2014 Feb 24;9(2):e88982. doi: 10.1371/journal.pone.0088982. eCollection 2014.

17.

TSG-6 inhibits neutrophil migration via direct interaction with the chemokine CXCL8.

Dyer DP, Thomson JM, Hermant A, Jowitt TA, Handel TM, Proudfoot AE, Day AJ, Milner CM.

J Immunol. 2014 Mar 1;192(5):2177-85. doi: 10.4049/jimmunol.1300194. Epub 2014 Feb 5.

18.

Characterization of the Vaginal Microbiota of Ewes and Cows Reveals a Unique Microbiota with Low Levels of Lactobacilli and Near-Neutral pH.

Swartz JD, Lachman M, Westveer K, O'Neill T, Geary T, Kott RW, Berardinelli JG, Hatfield PG, Thomson JM, Roberts A, Yeoman CJ.

Front Vet Sci. 2014 Oct 15;1:19. doi: 10.3389/fvets.2014.00019. eCollection 2014.

19.

E-readers are more effective than paper for some with dyslexia.

Schneps MH, Thomson JM, Chen C, Sonnert G, Pomplun M.

PLoS One. 2013 Sep 18;8(9):e75634. doi: 10.1371/journal.pone.0075634. eCollection 2013.

20.

Malignant transformation of colonic epithelial cells by a colon-derived long noncoding RNA.

Franklin JL, Rankin CR, Levy S, Snoddy JR, Zhang B, Washington MK, Thomson JM, Whitehead RH, Coffey RJ.

Biochem Biophys Res Commun. 2013 Oct 11;440(1):99-104. doi: 10.1016/j.bbrc.2013.09.040. Epub 2013 Sep 14.

21.

Shorter lines facilitate reading in those who struggle.

Schneps MH, Thomson JM, Sonnert G, Pomplun M, Chen C, Heffner-Wong A.

PLoS One. 2013 Aug 5;8(8):e71161. doi: 10.1371/journal.pone.0071161. Print 2013.

22.

The microaerophilic microbiota of de-novo paediatric inflammatory bowel disease: the BISCUIT study.

Hansen R, Berry SH, Mukhopadhya I, Thomson JM, Saunders KA, Nicholl CE, Bisset WM, Loganathan S, Mahdi G, Kastner-Cole D, Barclay AR, Bishop J, Flynn DM, McGrogan P, Russell RK, El-Omar EM, Hold GL.

PLoS One. 2013;8(3):e58825. doi: 10.1371/journal.pone.0058825. Epub 2013 Mar 12.

23.

Differential processing of let-7a precursors influences RRM2 expression and chemosensitivity in pancreatic cancer: role of LIN-28 and SET oncoprotein.

Bhutia YD, Hung SW, Krentz M, Patel D, Lovin D, Manoharan R, Thomson JM, Govindarajan R.

PLoS One. 2013;8(1):e53436. doi: 10.1371/journal.pone.0053436. Epub 2013 Jan 15.

24.

The identification of candidate genes and SNP markers for classical bovine spongiform encephalopathy susceptibility.

Thomson JM, Bowles V, Choi JW, Basu U, Meng Y, Stothard P, Moore S.

Prion. 2012 Nov-Dec;6(5):461-9. doi: 10.4161/pri.21866. Epub 2012 Aug 23.

25.

Impaired non-speech auditory processing at a pre-reading age is a risk-factor for dyslexia but not a predictor: an ERP study.

Plakas A, van Zuijen T, van Leeuwen T, Thomson JM, van der Leij A.

Cortex. 2013 Apr;49(4):1034-45. doi: 10.1016/j.cortex.2012.02.013. Epub 2012 Mar 29.

PMID:
22542727
26.

Characterization of the longissimus lumborum transcriptome response to adding propionate to the diet of growing Angus beef steers.

Baldwin RL 6th, Li RW, Li CJ, Thomson JM, Bequette BJ.

Physiol Genomics. 2012 May 1;44(10):543-50. doi: 10.1152/physiolgenomics.00144.2011. Epub 2012 Mar 27.

PMID:
22454452
27.

A comprehensive evaluation of colonic mucosal isolates of Sutterella wadsworthensis from inflammatory bowel disease.

Mukhopadhya I, Hansen R, Nicholl CE, Alhaidan YA, Thomson JM, Berry SH, Pattinson C, Stead DA, Russell RK, El-Omar EM, Hold GL.

PLoS One. 2011;6(10):e27076. doi: 10.1371/journal.pone.0027076. Epub 2011 Oct 31.

28.

miR-17~92 cooperates with RB pathway mutations to promote retinoblastoma.

Conkrite K, Sundby M, Mukai S, Thomson JM, Mu D, Hammond SM, MacPherson D.

Genes Dev. 2011 Aug 15;25(16):1734-45. doi: 10.1101/gad.17027411. Epub 2011 Aug 4.

29.

Detection of Campylobacter concisus and other Campylobacter species in colonic biopsies from adults with ulcerative colitis.

Mukhopadhya I, Thomson JM, Hansen R, Berry SH, El-Omar EM, Hold GL.

PLoS One. 2011;6(6):e21490. doi: 10.1371/journal.pone.0021490. Epub 2011 Jun 27.

30.

Exploring the inhibition of CTX-M-9 by beta-lactamase inhibitors and carbapenems.

Bethel CR, Taracila M, Shyr T, Thomson JM, Distler AM, Hujer KM, Hujer AM, Endimiani A, Papp-Wallace K, Bonnet R, Bonomo RA.

Antimicrob Agents Chemother. 2011 Jul;55(7):3465-75. doi: 10.1128/AAC.00089-11. Epub 2011 May 9.

31.

Enterohepatic helicobacter in ulcerative colitis: potential pathogenic entities?

Thomson JM, Hansen R, Berry SH, Hope ME, Murray GI, Mukhopadhya I, McLean MH, Shen Z, Fox JG, El-Omar E, Hold GL.

PLoS One. 2011 Feb 23;6(2):e17184. doi: 10.1371/journal.pone.0017184.

32.

Could Helicobacter organisms cause inflammatory bowel disease?

Hansen R, Thomson JM, Fox JG, El-Omar EM, Hold GL.

FEMS Immunol Med Microbiol. 2011 Feb;61(1):1-14. doi: 10.1111/j.1574-695X.2010.00744.x. Epub 2010 Oct 19. Review.

33.
34.

Introduction: Advances in early detection of reading risk.

Thomson JM, Hogan TP.

J Learn Disabil. 2010 Jul-Aug;43(4):291-3. doi: 10.1177/0022219410366831. No abstract available.

PMID:
20581370
35.

MicroRNAs, a superimposed regulatory network important for development and disease.

Irminger-Finger I, Thomson JM, Kim JK.

Int J Biochem Cell Biol. 2010 Aug;42(8):1234-5. doi: 10.1016/j.biocel.2010.06.005. Epub 2010 Jun 11. No abstract available.

PMID:
20542137
36.

Auditory processing and early literacy skills in a preschool and kindergarten population.

Corriveau KH, Goswami U, Thomson JM.

J Learn Disabil. 2010 Jul-Aug;43(4):369-82. doi: 10.1177/0022219410369071. Epub 2010 May 10.

PMID:
20457882
37.

Toxoplasma gondii infection specifically increases the levels of key host microRNAs.

Zeiner GM, Norman KL, Thomson JM, Hammond SM, Boothroyd JC.

PLoS One. 2010 Jan 15;5(1):e8742. doi: 10.1371/journal.pone.0008742.

38.

The role of infection in the aetiology of inflammatory bowel disease.

Hansen R, Thomson JM, El-Omar EM, Hold GL.

J Gastroenterol. 2010 Mar;45(3):266-76. doi: 10.1007/s00535-009-0191-y. Review.

PMID:
20076977
39.

Auditory discrimination and auditory sensory behaviours in autism spectrum disorders.

Jones CR, Happé F, Baird G, Simonoff E, Marsden AJ, Tregay J, Phillips RJ, Goswami U, Thomson JM, Charman T.

Neuropsychologia. 2009 Nov;47(13):2850-8. doi: 10.1016/j.neuropsychologia.2009.06.015. Epub 2009 Jun 21.

PMID:
19545576
40.

The role of pH in determining the species composition of the human colonic microbiota.

Duncan SH, Louis P, Thomson JM, Flint HJ.

Environ Microbiol. 2009 Aug;11(8):2112-22. doi: 10.1111/j.1462-2920.2009.01931.x. Epub 2009 Apr 21.

PMID:
19397676
41.

Rapid determination of quinolone resistance in Acinetobacter spp.

Hujer KM, Hujer AM, Endimiani A, Thomson JM, Adams MD, Goglin K, Rather PN, Pennella TT, Massire C, Eshoo MW, Sampath R, Blyn LB, Ecker DJ, Bonomo RA.

J Clin Microbiol. 2009 May;47(5):1436-42. doi: 10.1128/JCM.02380-08. Epub 2009 Mar 18.

42.

The ERP signature of sound rise time changes.

Thomson JM, Goswami U, Baldeweg T.

Brain Res. 2009 Feb 13;1254:74-83. doi: 10.1016/j.brainres.2008.11.087. Epub 2008 Dec 7.

PMID:
19100244
43.

Computational redesign of the SHV-1 beta-lactamase/beta-lactamase inhibitor protein interface.

Reynolds KA, Hanes MS, Thomson JM, Antczak AJ, Berger JM, Bonomo RA, Kirsch JF, Handel TM.

J Mol Biol. 2008 Oct 24;382(5):1265-75. doi: 10.1016/j.jmb.2008.05.051. Epub 2008 May 29.

44.

Inhibition of class A beta-lactamases by carbapenems: crystallographic observation of two conformations of meropenem in SHV-1.

Nukaga M, Bethel CR, Thomson JM, Hujer AM, Distler A, Anderson VE, Knox JR, Bonomo RA.

J Am Chem Soc. 2008 Sep 24;130(38):12656-62. doi: 10.1021/ja7111146. Epub 2008 Aug 30.

45.

Lin-28 interaction with the Let-7 precursor loop mediates regulated microRNA processing.

Newman MA, Thomson JM, Hammond SM.

RNA. 2008 Aug;14(8):1539-49. doi: 10.1261/rna.1155108. Epub 2008 Jun 19.

46.

Inhibition of OXA-1 beta-lactamase by penems.

Bethel CR, Distler AM, Ruszczycky MW, Carey MP, Carey PR, Hujer AM, Taracila M, Helfand MS, Thomson JM, Kalp M, Anderson VE, Leonard DA, Hujer KM, Abe T, Venkatesan AM, Mansour TS, Bonomo RA.

Antimicrob Agents Chemother. 2008 Sep;52(9):3135-43. doi: 10.1128/AAC.01677-07. Epub 2008 Jun 16.

47.

Rhythmic processing in children with developmental dyslexia: auditory and motor rhythms link to reading and spelling.

Thomson JM, Goswami U.

J Physiol Paris. 2008 Jan-May;102(1-3):120-9. doi: 10.1016/j.jphysparis.2008.03.007. Epub 2008 Mar 18.

PMID:
18448317
48.

Fgf-dependent depletion of microRNA-133 promotes appendage regeneration in zebrafish.

Yin VP, Thomson JM, Thummel R, Hyde DR, Hammond SM, Poss KD.

Genes Dev. 2008 Mar 15;22(6):728-33. doi: 10.1101/gad.1641808.

49.

Dynamic development and dynamic education.

Thomson JM, Fischer KW.

Monogr Soc Res Child Dev. 2007;72(3):150-6. No abstract available.

PMID:
18084853
50.

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