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Items: 1 to 50 of 64

1.

Seismic velocities of CaSiO3 perovskite can explain LLSVPs in Earth's lower mantle.

Thomson AR, Crichton WA, Brodholt JP, Wood IG, Siersch NC, Muir JMR, Dobson DP, Hunt SA.

Nature. 2019 Aug 14. doi: 10.1038/s41586-019-1483-x. [Epub ahead of print]

PMID:
31413365
2.

Navigating the Structural Landscape of De Novo α-Helical Bundles.

Rhys GG, Wood CW, Beesley JL, Zaccai NR, Burton AJ, Brady RL, Thomson AR, Woolfson DN.

J Am Chem Soc. 2019 Jun 5;141(22):8787-8797. doi: 10.1021/jacs.8b13354. Epub 2019 May 22.

PMID:
31066556
3.

Maintaining and breaking symmetry in homomeric coiled-coil assemblies.

Rhys GG, Wood CW, Lang EJM, Mulholland AJ, Brady RL, Thomson AR, Woolfson DN.

Nat Commun. 2018 Oct 8;9(1):4132. doi: 10.1038/s41467-018-06391-y.

4.

Hydra Mesoglea Proteome Identifies Thrombospondin as a Conserved Component Active in Head Organizer Restriction.

Lommel M, Strompen J, Hellewell AL, Balasubramanian GP, Christofidou ED, Thomson AR, Boyle AL, Woolfson DN, Puglisi K, Hartl M, Holstein TW, Adams JC, Özbek S.

Sci Rep. 2018 Aug 6;8(1):11753. doi: 10.1038/s41598-018-30035-2.

5.

Applying graph theory to protein structures: an Atlas of coiled coils.

Heal JW, Bartlett GJ, Wood CW, Thomson AR, Woolfson DN.

Bioinformatics. 2018 Oct 1;34(19):3316-3323. doi: 10.1093/bioinformatics/bty347.

6.

The phase diagrams of KCaF3 and NaMgF3 by ab initio simulations.

Jakymiw C, Vočadlo L, Dobson DP, Bailey E, Thomson AR, Brodholt JP, Wood IG, Lindsay-Scott A.

Phys Chem Miner. 2018;45(4):311-322. doi: 10.1007/s00269-017-0920-3. Epub 2017 Sep 13.

7.

Membrane-spanning α-helical barrels as tractable protein-design targets.

Niitsu A, Heal JW, Fauland K, Thomson AR, Woolfson DN.

Philos Trans R Soc Lond B Biol Sci. 2017 Aug 5;372(1726). pii: 20160213. doi: 10.1098/rstb.2016.0213. Review.

8.

ISAMBARD: an open-source computational environment for biomolecular analysis, modelling and design.

Wood CW, Heal JW, Thomson AR, Bartlett GJ, Ibarra AÁ, Brady RL, Sessions RB, Woolfson DN.

Bioinformatics. 2017 Oct 1;33(19):3043-3050. doi: 10.1093/bioinformatics/btx352.

9.

A monodisperse transmembrane α-helical peptide barrel.

Mahendran KR, Niitsu A, Kong L, Thomson AR, Sessions RB, Woolfson DN, Bayley H.

Nat Chem. 2017 May;9(5):411-419. doi: 10.1038/nchem.2647. Epub 2016 Nov 14.

PMID:
28430192
10.

Construction of a Chassis for a Tripartite Protein-Based Molecular Motor.

Small LSR, Bruning M, Thomson AR, Boyle AL, Davies RB, Curmi PMG, Forde NR, Linke H, Woolfson DN, Bromley EHC.

ACS Synth Biol. 2017 Jun 16;6(6):1096-1102. doi: 10.1021/acssynbio.7b00037. Epub 2017 Mar 14.

11.

Installing hydrolytic activity into a completely de novo protein framework.

Burton AJ, Thomson AR, Dawson WM, Brady RL, Woolfson DN.

Nat Chem. 2016 Sep;8(9):837-44. doi: 10.1038/nchem.2555. Epub 2016 Jul 4.

PMID:
27554410
12.

Necrotizing Fasciitis of the Thigh and Calf: A Reminder to Exclude a Perforated Intra-Abdominal Viscus: A Case Report.

Connor MJ, Thomson AR, Grange S, Agarwal T.

JBJS Case Connect. 2016 Apr-Jun;6(2):e44. doi: 10.2106/JBJS.CC.15.00217.

PMID:
29252677
13.

Slab melting as a barrier to deep carbon subduction.

Thomson AR, Walter MJ, Kohn SC, Brooker RA.

Nature. 2016 Jan 7;529(7584):76-9. doi: 10.1038/nature16174.

PMID:
26738593
14.

The equation of state of the Pmmn phase of NiSi.

Lord OT, Thomson AR, Wann ET, Wood IG, Dobson DP, Vocadlo L.

J Appl Crystallogr. 2015 Nov 28;48(Pt 6):1914-1920. eCollection 2015 Dec 1.

15.

Controlling the Assembly of Coiled-Coil Peptide Nanotubes.

Thomas F, Burgess NC, Thomson AR, Woolfson DN.

Angew Chem Int Ed Engl. 2016 Jan 18;55(3):987-91. doi: 10.1002/anie.201509304. Epub 2015 Dec 14.

16.

Functionalized α-Helical Peptide Hydrogels for Neural Tissue Engineering.

Mehrban N, Zhu B, Tamagnini F, Young FI, Wasmuth A, Hudson KL, Thomson AR, Birchall MA, Randall AD, Song B, Woolfson DN.

ACS Biomater Sci Eng. 2015 Jun 8;1(6):431-439. Epub 2015 Apr 28.

17.

Modular Design of Self-Assembling Peptide-Based Nanotubes.

Burgess NC, Sharp TH, Thomas F, Wood CW, Thomson AR, Zaccai NR, Brady RL, Serpell LC, Woolfson DN.

J Am Chem Soc. 2015 Aug 26;137(33):10554-62. doi: 10.1021/jacs.5b03973. Epub 2015 Aug 12.

PMID:
26219086
18.

De novo protein design: how do we expand into the universe of possible protein structures?

Woolfson DN, Bartlett GJ, Burton AJ, Heal JW, Niitsu A, Thomson AR, Wood CW.

Curr Opin Struct Biol. 2015 Aug;33:16-26. doi: 10.1016/j.sbi.2015.05.009. Epub 2015 Jun 18. Review.

19.

Computational design of water-soluble α-helical barrels.

Thomson AR, Wood CW, Burton AJ, Bartlett GJ, Sessions RB, Brady RL, Woolfson DN.

Science. 2014 Oct 24;346(6208):485-8. doi: 10.1126/science.1257452.

20.

The ubiquitin C-terminal hydrolase L1 (UCH-L1) C terminus plays a key role in protein stability, but its farnesylation is not required for membrane association in primary neurons.

Bishop P, Rubin P, Thomson AR, Rocca D, Henley JM.

J Biol Chem. 2014 Dec 26;289(52):36140-9. doi: 10.1074/jbc.M114.557124. Epub 2014 Oct 17.

21.

CCBuilder: an interactive web-based tool for building, designing and assessing coiled-coil protein assemblies.

Wood CW, Bruning M, Ibarra AÁ, Bartlett GJ, Thomson AR, Sessions RB, Brady RL, Woolfson DN.

Bioinformatics. 2014 Nov 1;30(21):3029-35. doi: 10.1093/bioinformatics/btu502. Epub 2014 Jul 26.

22.

A small-scale air-cathode microbial fuel cell for on-line monitoring of water quality.

Di Lorenzo M, Thomson AR, Schneider K, Cameron PJ, Ieropoulos I.

Biosens Bioelectron. 2014 Dec 15;62:182-8. doi: 10.1016/j.bios.2014.06.050. Epub 2014 Jun 30.

PMID:
25005554
23.

Assessing cellular response to functionalized α-helical peptide hydrogels.

Mehrban N, Abelardo E, Wasmuth A, Hudson KL, Mullen LM, Thomson AR, Birchall MA, Woolfson DN.

Adv Healthc Mater. 2014 Sep;3(9):1387-91. doi: 10.1002/adhm.201400065. Epub 2014 Mar 24.

24.

A basis set of de novo coiled-coil peptide oligomers for rational protein design and synthetic biology.

Fletcher JM, Boyle AL, Bruning M, Bartlett GJ, Vincent TL, Zaccai NR, Armstrong CT, Bromley EH, Booth PJ, Brady RL, Thomson AR, Woolfson DN.

ACS Synth Biol. 2012 Jun 15;1(6):240-50. doi: 10.1021/sb300028q. Epub 2012 May 14.

PMID:
23651206
25.

Cryo-transmission electron microscopy structure of a gigadalton peptide fiber of de novo design.

Sharp TH, Bruning M, Mantell J, Sessions RB, Thomson AR, Zaccai NR, Brady RL, Verkade P, Woolfson DN.

Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13266-71. doi: 10.1073/pnas.1118622109. Epub 2012 Jul 30.

26.

New currency for old rope: from coiled-coil assemblies to α-helical barrels.

Woolfson DN, Bartlett GJ, Bruning M, Thomson AR.

Curr Opin Struct Biol. 2012 Aug;22(4):432-41. doi: 10.1016/j.sbi.2012.03.002. Epub 2012 Mar 23. Review.

PMID:
22445228
27.

A de novo peptide hexamer with a mutable channel.

Zaccai NR, Chi B, Thomson AR, Boyle AL, Bartlett GJ, Bruning M, Linden N, Sessions RB, Booth PJ, Brady RL, Woolfson DN.

Nat Chem Biol. 2011 Oct 30;7(12):935-41. doi: 10.1038/nchembio.692.

28.

Bioorthogonal dual functionalization of self-assembling peptide fibers.

Mahmoud ZN, Gunnoo SB, Thomson AR, Fletcher JM, Woolfson DN.

Biomaterials. 2011 May;32(15):3712-20. doi: 10.1016/j.biomaterials.2010.12.002. Epub 2011 Feb 24.

PMID:
21353303
29.

The effect of COPD health forecasting on hospitalisation and health care utilisation in patients with mild-to-moderate COPD.

Bakerly ND, Roberts JA, Thomson AR, Dyer M.

Chron Respir Dis. 2011;8(1):5-9. doi: 10.1177/1479972310388950. Epub 2011 Jan 19.

PMID:
21248023
31.

Diagnosis and management of iron deficiency anaemia: a clinical update.

Pasricha SR, Flecknoe-Brown SC, Allen KJ, Gibson PR, McMahon LP, Olynyk JK, Roger SD, Savoia HF, Tampi R, Thomson AR, Wood EM, Robinson KL.

Med J Aust. 2010 Nov 1;193(9):525-32. Review.

PMID:
21034387
32.

Dissection of the DNA mimicry of the bacteriophage T7 Ocr protein using chemical modification.

Stephanou AS, Roberts GA, Cooper LP, Clarke DJ, Thomson AR, MacKay CL, Nutley M, Cooper A, Dryden DT.

J Mol Biol. 2009 Aug 21;391(3):565-76. doi: 10.1016/j.jmb.2009.06.020. Epub 2009 Jun 10.

33.

Getting harder: cobalt(III)-template synthesis of catenanes and rotaxanes.

Leigh DA, Lusby PJ, McBurney RT, Morelli A, Slawin AM, Thomson AR, Walker DB.

J Am Chem Soc. 2009 Mar 18;131(10):3762-71. doi: 10.1021/ja809627j.

PMID:
19275264
34.

Designed alpha-helical tectons for constructing multicomponent synthetic biological systems.

Bromley EH, Sessions RB, Thomson AR, Woolfson DN.

J Am Chem Soc. 2009 Jan 28;131(3):928-30. doi: 10.1021/ja804231a.

PMID:
19115943
35.

Rational design of peptide-based building blocks for nanoscience and synthetic biology.

Armstrong CT, Boyle AL, Bromley EH, Mahmoud ZN, Smith L, Thomson AR, Woolfson DN.

Faraday Discuss. 2009;143:305-17; discussion 359-72.

PMID:
20334109
36.

How much of protein sequence space has been explored by life on Earth?

Dryden DT, Thomson AR, White JH.

J R Soc Interface. 2008 Aug 6;5(25):953-6. doi: 10.1098/rsif.2008.0085.

37.

Switchable dual binding mode molecular shuttle.

Leigh DA, Thomson AR.

Org Lett. 2006 Nov 9;8(23):5377-9.

PMID:
17078722
38.

Rotaxanes of cyclic peptides.

Aucagne V, Leigh DA, Lock JS, Thomson AR.

J Am Chem Soc. 2006 Feb 15;128(6):1784-5.

PMID:
16464065
39.

Patterns of methyl and O-acetyl esterification in spinach pectins: new complexity.

Perrone P, Hewage CM, Thomson AR, Bailey K, Sadler IH, Fry SC.

Phytochemistry. 2002 May;60(1):67-77.

PMID:
11985854
40.
41.

Effect of blood donation on the establishment of normal ranges of lymphocyte subsets.

Bryant JA, Wylie BR, Yuan FF, Ribeiro A, Thomson AR, Cooley MA, Fletcher A.

Transfusion. 1996 Jun;36(6):559-66.

PMID:
8669090
42.

One-way valve malfunction in a circle system.

Thomson AR, Gordon NH.

Anaesthesia. 1995 Oct;50(10):920-1. No abstract available.

43.
44.

Leukodepleted blood components.

Thomson AR.

Anaesth Intensive Care. 1993 Feb;21(1):39-43. Review.

PMID:
8447605
45.

HTLV-I infection in selected populations in Australia and the western Pacific region.

Wylie BR, Thomson AR.

Med J Aust. 1992 Aug 17;157(4):286-7. No abstract available.

PMID:
1435462
46.

Guidelines for the use of fresh frozen plasma. British Committee for Standards in Haematology, Working Party of the Blood Transfusion Task Force.

Contreras M, Ala FA, Greaves M, Jones J, Levin M, Machin SJ, Morgan C, Murphy W, Napier JA, Thomson AR.

Transfus Med. 1992 Mar;2(1):57-63.

PMID:
1308464
47.

Comparative studies on mitochondrial respiration in four strains of rats (Rattus norvegicus).

Berdanier CD, Thomson AR.

Comp Biochem Physiol B. 1986;85(3):531-5.

PMID:
3791958
48.

Patents and literature.

Smith JA, Luenser SJ, Olson NF, Magee EL, Olivieri R, Viglia A, Degen L, Angelini L, Fascetti E, Miwa N, Masuda Y, Kawarabuki S, Sai T, Saito T, Busby MG, Hartwig DW, Heady R, Yagi Y, Kouno K, Inui T, Marshall JJ, Thomson AR, Miles BJ, Caygill JC, Moore DJ, Nakamura K, Nankai S, Iijima T, Ooshima Y, Baldeschwieler JD, Gamble RC, Mauk MR, Shen TY, Ponpipom MM, Khachatourians GG, Zaffaroni P, Senni A, Formiconi L, Blair JE, Davis LT, Cabane B, Vergnault J, Volesky B, Tsezos M, Bull FG, Messing RA, Ahnell JE, Chen LF, Gong CS, Tsao GT, Katsumata R, Green S, Leiser RS, Fedde PA, Ghosh S, Henry MP, Klass DL, Uemura Y, Arimura H, Morise H, Funakoshi S, Suyama T, Lützen NW, Kita DA, Fenton DM, Maclennan DG, Ousby JC, Owen TR, Steer DC, Araujo FJ, Calderon IL, Diaz IL, Olmedo C, Rebeller M, Yout P, Lonchamp D, Mynatt RL, Berg A, Eckmayer Z, Maselli JA, Horwath RO, Gotou E, Satou K, Wu RJ, Bahl CP, Narang SA, Hershberger CL, Baxter JD, Roberts JL, Seeburg PH, Goodman HM, Tsuchida T.

Appl Biochem Biotechnol. 1982 Nov;7(6):497-510. doi: 10.1007/BF02799180. No abstract available.

PMID:
24234462
49.

Modification of pig heart lactate dehydrogenase. A derivative prossessing enhanced thermal stability.

Foster RL, Thomson AR.

Biochim Biophys Acta. 1973 Oct 10;321(2):409-12. No abstract available.

PMID:
4796956
50.

Flow-through density meter for zonal centrifugation and other procedures.

Atherton RS, Boyce IS, Clayton CG, Thomson AR.

Prep Biochem. 1973;3(3):257-67. No abstract available.

PMID:
4716265

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