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Treatment access is only the first step to hepatitis C elimination: experience of universal anti-viral treatment access in Australia.

Doyle JS, Scott N, Sacks-Davis R, Pedrana AE, Thompson AJ, Hellard ME; Eliminate Hepatitis C Partnership.

Aliment Pharmacol Ther. 2019 Mar 25. doi: 10.1111/apt.15210. [Epub ahead of print]


Peginterferon alfa-2a (40 kD) stopping rules in chronic hepatitis B: a systematic review and meta-analysis of individual participant data.

Pavlovic V, Yang L, Chan HL, Hou J, Janssen HL, Kao JH, Lampertico P, Peng CY, Piratvisuth T, Thompson AJ, Wedemeyer H, Wei L, Wat C.

Antivir Ther. 2019 Mar 13. doi: 10.3851/IMP3304. [Epub ahead of print]


Virus recognition of glycan receptors.

Thompson AJ, de Vries RP, Paulson JC.

Curr Opin Virol. 2019 Mar 5;34:117-129. doi: 10.1016/j.coviro.2019.01.004. [Epub ahead of print] Review.


Fructans redistribution prior to sprouting in stored onion bulbs is a potential marker for dormancy break.

Ohanenye IC, Alamar MC, Thompson AJ, Terry LA.

Postharvest Biol Technol. 2019 Mar;149:221-234. doi: 10.1016/j.postharvbio.2018.12.002.


Community-based, point-of-care hepatitis C testing: perspectives and preferences of people who inject drugs.

Latham NH, Pedrana A, Doyle JS, Howell J, Williams B, Higgs P, Thompson AJ, Hellard ME.

J Viral Hepat. 2019 Feb 23. doi: 10.1111/jvh.13087. [Epub ahead of print]


Clinical relevance of cortical network dynamics in early primary progressive MS.

Tur C, Kanber B, Eshaghi A, Altmann DR, Khaleeli Z, Prados F, Ourselin S, Thompson AJ, Gandini Wheeler-Kingshott CA, Toosy AT, Ciccarelli O.

Mult Scler. 2019 Feb 25:1352458519831400. doi: 10.1177/1352458519831400. [Epub ahead of print]


MSJ 2019 - Editorial comment.

Thompson AJ, Antel J, Carroll WB, Geurts J.

Mult Scler. 2019 Jan;25(1):4-5. doi: 10.1177/1352458518819096. No abstract available.


Learning from a failure in threat assessment: 11 questions and not enough answers.

Goodrum S, Evans MK, Thompson AJ, Woodward W.

Behav Sci Law. 2019 Feb 14. doi: 10.1002/bsl.2399. [Epub ahead of print]


Novel genetically-modified chimpanzee adenovirus and MVA-vectored respiratory syncytial virus vaccine safely boosts humoral and cellular immunity in healthy older adults.

Green CA, Sande CJ, Scarselli E, Capone S, Vitelli A, Nicosia A, Silva-Reyes L, Thompson AJ, de Lara CM, Taylor KS, Haworth K, Hutchings CL, Cargill T, Angus B, Klenerman P, Pollard AJ.

J Infect. 2019 Feb 8. pii: S0163-4453(19)30038-6. doi: 10.1016/j.jinf.2019.02.003. [Epub ahead of print]


Rapid changes in tissue mechanics regulate cell behaviour in the developing embryonic brain.

Thompson AJ, Pillai EK, Dimov IB, Foster SK, Holt CE, Franze K.

Elife. 2019 Jan 15;8. pii: e39356. doi: 10.7554/eLife.39356.


Flexibility In Vitro of Amino Acid 226 in the Receptor-Binding Site of an H9 Subtype Influenza A Virus and Its Effect In Vivo on Virus Replication, Tropism, and Transmission.

Obadan AO, Santos J, Ferreri L, Thompson AJ, Carnaccini S, Geiger G, Gonzalez Reiche AS, Rajão DS, Paulson JC, Perez DR.

J Virol. 2019 Mar 5;93(6). pii: e02011-18. doi: 10.1128/JVI.02011-18. Print 2019 Mar 15.


Structural network disruption markers explain disability in multiple sclerosis.

Charalambous T, Tur C, Prados F, Kanber B, Chard DT, Ourselin S, Clayden JD, A M Gandini Wheeler-Kingshott C, Thompson AJ, Toosy AT.

J Neurol Neurosurg Psychiatry. 2019 Feb;90(2):219-226. doi: 10.1136/jnnp-2018-318440. Epub 2018 Nov 22.


Gut-Directed Pelvic Floor Behavioral Treatment for Fecal Incontinence and Constipation in Patients with Inflammatory Bowel Disease.

Khera AJ, Chase JW, Salzberg M, Thompson AJV, Kamm MA.

Inflamm Bowel Dis. 2019 Feb 21;25(3):620-626. doi: 10.1093/ibd/izy344.


A member of the TERMINAL FLOWER 1/CENTRORADIALIS gene family controls sprout growth in potato tubers.

Morris WL, Alamar MC, Lopez-Cobollo RM, Castillo Cañete J, Bennett M, Van der Kaay J, Stevens J, Kumar Sharma S, McLean K, Thompson AJ, Terry LA, Turnbull CGN, Bryan GJ, Taylor MA.

J Exp Bot. 2019 Feb 5;70(3):835-843. doi: 10.1093/jxb/ery387.


Plasticity of Amino Acid Residue 145 Near the Receptor Binding Site of H3 Swine Influenza A Viruses and Its Impact on Receptor Binding and Antibody Recognition.

Santos JJS, Abente EJ, Obadan AO, Thompson AJ, Ferreri L, Geiger G, Gonzalez-Reiche AS, Lewis NS, Burke DF, Rajão DS, Paulson JC, Vincent AL, Perez DR.

J Virol. 2019 Jan 4;93(2). pii: e01413-18. doi: 10.1128/JVI.01413-18. Print 2019 Jan 15.


Human genomics of acute liver failure due to hepatitis B virus infection: An exome sequencing study in liver transplant recipients.

Asgari S, Chaturvedi N, Scepanovic P, Hammer C, Semmo N, Giostra E, Müllhaupt B, Angus P, Thompson AJ, Moradpour D, Fellay J.

J Viral Hepat. 2019 Feb;26(2):271-277. doi: 10.1111/jvh.13019. Epub 2018 Nov 6.


Surveillance improves survival of patients with hepatocellular carcinoma: a prospective population-based study.

Hong TP, Gow PJ, Fink M, Dev A, Roberts SK, Nicoll A, Lubel JS, Kronborg I, Arachchi N, Ryan M, Kemp WW, Knight V, Sundararajan V, Desmond P, Thompson AJ, Bell SJ.

Med J Aust. 2018 Oct 15;209(8):348-354.


"B in IT" - a community-based model for the management of hepatitis B patients in primary care clinics using a novel web-based clinical tool.

O'Leary DA, Cropp E, Isaac D, Desmond PV, Bell S, Nguyen T, Wong D, Howell J, Richmond J, O'Neill J, Thompson AJ.

Hepatol Med Policy. 2018 Jan 4;3:1. doi: 10.1186/s41124-017-0031-2. eCollection 2018.


Patient-centred care for cirrhosis: a key role for chronic disease management.

Papaluca T, Thompson AJ.

Med J Aust. 2018 Sep 1;209(7):296-297. No abstract available.


Avenues to Characterize the Interactions of Extended N-Glycans with Proteins by NMR Spectroscopy: The Influenza Hemagglutinin Case.

Fernández de Toro B, Peng W, Thompson AJ, Domínguez G, Cañada FJ, Pérez-Castells J, Paulson JC, Jiménez-Barbero J, Canales Á.

Angew Chem Int Ed Engl. 2018 Nov 12;57(46):15051-15055. doi: 10.1002/anie.201807162. Epub 2018 Oct 17.


Proximity Ligation-Based Fluorogenic Imaging Agents for Neuraminidases.

Gao Z, Thompson AJ, Paulson JC, Withers SG.

Angew Chem Int Ed Engl. 2018 Oct 8;57(41):13538-13541. doi: 10.1002/anie.201808196. Epub 2018 Sep 14.


NGM282 for Treatment of Patients With Primary Biliary Cholangitis: A Multicenter, Randomized, Double-Blind, Placebo-Controlled Trial.

Mayo MJ, Wigg AJ, Leggett BA, Arnold H, Thompson AJ, Weltman M, Carey EJ, Muir AJ, Ling L, Rossi SJ, DePaoli AM.

Hepatol Commun. 2018 Aug 30;2(9):1037-1050. doi: 10.1002/hep4.1209. eCollection 2018 Sep.


Humoral and cellular immunity to RSV in infants, children and adults.

Green CA, Sande CJ, de Lara C, Thompson AJ, Silva-Reyes L, Napolitano F, Pierantoni A, Capone S, Vitelli A, Klenerman P, Pollard AJ.

Vaccine. 2018 Oct 1;36(41):6183-6190. doi: 10.1016/j.vaccine.2018.08.056. Epub 2018 Aug 31.


Quantitative MRI of rostral spinal cord and brain regions is predictive of functional recovery in acute spinal cord injury.

Seif M, Curt A, Thompson AJ, Grabher P, Weiskopf N, Freund P.

Neuroimage Clin. 2018 Aug 19;20:556-563. doi: 10.1016/j.nicl.2018.08.026. eCollection 2018.


Mapping the Orthosteric Binding Site of the Human 5-HT3 Receptor Using Photo-cross-linking Antagonists.

Jack T, Leuenberger M, Ruepp MD, Vernekar SKV, Thompson AJ, Braga-Lagache S, Heller M, Lochner M.

ACS Chem Neurosci. 2018 Sep 11. doi: 10.1021/acschemneuro.8b00327. [Epub ahead of print]


Design Analysis and Optimization of a Single-Layer PDMS Microfluidic Artificial Lung.

Thompson AJ, Ma LJ, Plegue TJ, Potkay JA.

IEEE Trans Biomed Eng. 2019 Apr;66(4):1082-1093. doi: 10.1109/TBME.2018.2866782. Epub 2018 Aug 22.


Generating EQ-5D-3L Utility Scores from the Dermatology Life Quality Index: A Mapping Study in Patients with Psoriasis.

Davison NJ, Thompson AJ, Turner AJ, Longworth L, McElhone K, Griffiths CEM, Payne K; BADBIR Study Group.

Value Health. 2018 Aug;21(8):1010-1018. doi: 10.1016/j.jval.2017.10.024. Epub 2017 Dec 26.


Outcome of hospital outpatient treatment of functional gastrointestinal disorders.

Basnayake C, Kamm MA, Salzberg M, Stanley A, Khera A, Burrell K, Wilson-O'Brien A, Hebbard G, Thompson AJ.

Intern Med J. 2019 Feb;49(2):225-231. doi: 10.1111/imj.14067.


Cows are highly motivated to access a grooming substrate.

McConnachie E, Smid AMC, Thompson AJ, Weary DM, Gaworski MA, von Keyserlingk MAG.

Biol Lett. 2018 Aug;14(8). pii: 20180303. doi: 10.1098/rsbl.2018.0303.


What is the role of apical ventriculotomy in children and young adults with hypertrophic cardiomyopathy?

Thompson AJ, Dearani JA, Johnson JN, Schaff HV, Towe EC, Palfreeman J, Wackel PL, Cetta F.

Congenit Heart Dis. 2018 Jul;13(4):617-623. doi: 10.1111/chd.12618. Epub 2018 Jul 17.


No association between IFNL3 (IL28B) genotype and response to peginterferon alfa-2a in HBeAg-positive or -negative chronic hepatitis B.

Wei L, Wedemeyer H, Liaw YF, Chan HL, Piratvisuth T, Marcellin P, Jia J, Tan D, Chow WC, Brunetto MR, Diago M, Gurel S, Morozov V, He H, Zhu Y, Wat C, Surujbally B, Thompson AJ.

PLoS One. 2018 Jul 17;13(7):e0199198. doi: 10.1371/journal.pone.0199198. eCollection 2018.


Structural cortical network reorganization associated with early conversion to multiple sclerosis.

Tur C, Eshaghi A, Altmann DR, Jenkins TM, Prados F, Grussu F, Charalambous T, Schmidt A, Ourselin S, Clayden JD, Wheeler-Kingshott CAMG, Thompson AJ, Ciccarelli O, Toosy AT.

Sci Rep. 2018 Jul 16;8(1):10715. doi: 10.1038/s41598-018-29017-1.


Community-based provision of direct-acting antiviral therapy for hepatitis C: study protocol and challenges of a randomized controlled trial.

Wade AJ, Doyle JS, Gane E, Stedman C, Draper B, Iser D, Roberts SK, Kemp W, Petrie D, Scott N, Higgs P, Agius PA, Roney J, Stothers L, Thompson AJ, Hellard ME.

Trials. 2018 Jul 16;19(1):383. doi: 10.1186/s13063-018-2768-3.


Prenatally diagnosed congenital lung malformations-A long-term outcome study.

Thompson AJ, Sidebotham EL, Chetcuti PAJ, Crabbe DCG.

Pediatr Pulmonol. 2018 Oct;53(10):1442-1446. doi: 10.1002/ppul.24119. Epub 2018 Jul 15.


Diversity of Influenza A(H5N1) Viruses in Infected Humans, Northern Vietnam, 2004-2010.

Imai H, Dinis JM, Zhong G, Moncla LH, Lopes TJS, McBride R, Thompson AJ, Peng W, Le MTQ, Hanson A, Lauck M, Sakai-Tagawa Y, Yamada S, Eggenberger J, O'Connor DH, Suzuki Y, Hatta M, Paulson JC, Neumann G, Friedrich TC, Kawaoka Y.

Emerg Infect Dis. 2018 Jul;24(7):1128-1238. doi: 10.3201/eid2407.171441.


Micro-scale fiber-optic force sensor fabricated using direct laser writing and calibrated using machine learning.

Thompson AJ, Power M, Yang GZ.

Opt Express. 2018 May 28;26(11):14186-14200. doi: 10.1364/OE.26.014186.


Deferred treatment with sofosbuvir-velpatasvir-voxilaprevir for patients with chronic hepatitis C virus who were previously treated with an NS5A inhibitor: an open-label substudy of POLARIS-1.

Bourlière M, Gordon SC, Schiff ER, Tran TT, Ravendhran N, Landis CS, Hyland RH, Stamm LM, Zhang J, Dvory-Sobol H, Subramanian GM, Brainard DM, McHutchison JG, Serfaty L, Thompson AJ, Sepe TE, Curry MP, Reddy KR, Manns MP.

Lancet Gastroenterol Hepatol. 2018 Aug;3(8):559-565. doi: 10.1016/S2468-1253(18)30118-3. Epub 2018 May 31.


Applying the 2017 McDonald diagnostic criteria for multiple sclerosis - Authors' reply.

Thompson AJ, Reingold SC, Cohen JA; International Panel on Diagnosis of Multiple Sclerosis.

Lancet Neurol. 2018 Jun;17(6):499-500. doi: 10.1016/S1474-4422(18)30168-6. No abstract available.


Progression of regional grey matter atrophy in multiple sclerosis.

Eshaghi A, Marinescu RV, Young AL, Firth NC, Prados F, Jorge Cardoso M, Tur C, De Angelis F, Cawley N, Brownlee WJ, De Stefano N, Laura Stromillo M, Battaglini M, Ruggieri S, Gasperini C, Filippi M, Rocca MA, Rovira A, Sastre-Garriga J, Geurts JJG, Vrenken H, Wottschel V, Leurs CE, Uitdehaag B, Pirpamer L, Enzinger C, Ourselin S, Gandini Wheeler-Kingshott CA, Chard D, Thompson AJ, Barkhof F, Alexander DC, Ciccarelli O.

Brain. 2018 Jun 1;141(6):1665-1677. doi: 10.1093/brain/awy088.


Bacteroides thetaiotaomicron generates diverse α-mannosidase activities through subtle evolution of a distal substrate-binding motif.

Thompson AJ, Spears RJ, Zhu Y, Suits MDL, Williams SJ, Gilbert HJ, Davies GJ.

Acta Crystallogr D Struct Biol. 2018 May 1;74(Pt 5):394-404. doi: 10.1107/S2059798318002942. Epub 2018 Apr 24.


Commentary on the ECTRIMS-EAN guideline for pharmacological treatment of multiple sclerosis.

Thompson AJ.

Ther Adv Neurol Disord. 2018 Apr 17;11:1756286418770378. doi: 10.1177/1756286418770378. eCollection 2018. No abstract available.


The economic case for precision medicine.

Gavan SP, Thompson AJ, Payne K.

Expert Rev Precis Med Drug Dev. 2018 Jan 8;3(1):1-9. doi: 10.1080/23808993.2018.1421858. eCollection 2018.


Practice Change From Intermittent Medication Boluses to Bolusing From a Continuous Infusion in Pediatric Critical Care: A Quality Improvement Project.

Hochstetler JL, Thompson AJ, Ball NM, Evans MC, Frame SC, Haney AL, Little AK, O'Donnell JL, Rickett BM, Mack EH.

Pediatr Crit Care Med. 2018 Jun;19(6):572-577. doi: 10.1097/PCC.0000000000001549.


Mind Bomb Regulates Cell Death during TNF Signaling by Suppressing RIPK1's Cytotoxic Potential.

Feltham R, Jamal K, Tenev T, Liccardi G, Jaco I, Domingues CM, Morris O, John SW, Annibaldi A, Widya M, Kearney CJ, Clancy D, Elliott PR, Glatter T, Qiao Q, Thompson AJ, Nesvizhskii A, Schmidt A, Komander D, Wu H, Martin S, Meier P.

Cell Rep. 2018 Apr 10;23(2):470-484. doi: 10.1016/j.celrep.2018.03.054.


Surface functionalisation with viscosity-sensitive BODIPY molecular rotor.

Vyšniauskas A, Lopez-Duarte I, Thompson AJ, Bull JA, Kuimova MK.

Methods Appl Fluoresc. 2018 Apr 13;6(3):034001. doi: 10.1088/2050-6120/aabb2c.


A complex epistatic network limits the mutational reversibility in the influenza hemagglutinin receptor-binding site.

Wu NC, Thompson AJ, Xie J, Lin CW, Nycholat CM, Zhu X, Lerner RA, Paulson JC, Wilson IA.

Nat Commun. 2018 Mar 28;9(1):1264. doi: 10.1038/s41467-018-03663-5.


Dorsal and ventral horn atrophy is associated with clinical outcome after spinal cord injury.

Huber E, David G, Thompson AJ, Weiskopf N, Mohammadi S, Freund P.

Neurology. 2018 Apr 24;90(17):e1510-e1522. doi: 10.1212/WNL.0000000000005361. Epub 2018 Mar 28.


Multiple sclerosis.

Thompson AJ, Baranzini SE, Geurts J, Hemmer B, Ciccarelli O.

Lancet. 2018 Apr 21;391(10130):1622-1636. doi: 10.1016/S0140-6736(18)30481-1. Epub 2018 Mar 23. Review.


Evaluation of coated steroidal implants containing trenbolone acetate and estradiol-17β on live performance, carcass traits, and sera metabolites in finishing steers.

Smith ZK, Thompson AJ, Hutcheson JP, Nichols WT, Johnson BJ.

J Anim Sci. 2018 May 4;96(5):1704-1723. doi: 10.1093/jas/sky095.


BIFURCATE FLOWER TRUSS: a novel locus controlling inflorescence branching in tomato contains a defective MAP kinase gene.

Silva Ferreira D, Kevei Z, Kurowski T, de Noronha Fonseca ME, Mohareb F, Boiteux LS, Thompson AJ.

J Exp Bot. 2018 Apr 27;69(10):2581-2593. doi: 10.1093/jxb/ery076.

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