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Structure-function guided modeling of chemokine-GPCR specificity for the chemokine XCL1 and its receptor XCR1.

Fox JC, Thomas MA, Dishman AF, Larsen O, Nakayama T, Yoshie O, Rosenkilde MM, Volkman BF.

Sci Signal. 2019 Sep 3;12(597). pii: eaat4128. doi: 10.1126/scisignal.aat4128.


The potential association of psychoactive pharmaceuticals in the environment with human neurological disorders.

Kaushik G, Thomas MA.

Sustain Chem Pharm. 2019 Sep;13. pii: 100148. doi: 10.1016/j.scp.2019.100148. Epub 2019 May 27.


Comparison of self-reported female condom failure and biomarker-confirmed semen exposure.

Walsh TL, Snead MC, St Claire BJ, Schwartz JL, Mauck CK, Frezieres RG, Blithe DL, Archer DF, Barnhart KT, Jensen JT, Nelson AL, Thomas MA, Wan LS, Weaver MA.

Contraception. 2019 Aug 2. pii: S0010-7824(19)30371-3. doi: 10.1016/j.contraception.2019.07.143. [Epub ahead of print]


Synthetic CT reconstruction using a deep spatial pyramid convolutional framework for MR-only breast radiotherapy.

Olberg S, Zhang H, Kennedy WR, Chun J, Rodriguez V, Zoberi I, Thomas MA, Kim JS, Mutic S, Green OL, Park JC.

Med Phys. 2019 Sep;46(9):4135-4147. doi: 10.1002/mp.13716. Epub 2019 Aug 7.


Strategies nurses use when caring for patients with moderate-to-severe traumatic brain injury who have cognitive impairments.

Oyesanya TO, Thomas MA.

J Clin Nurs. 2019 Jun 13. doi: 10.1111/jocn.14958. [Epub ahead of print]


Predictors of Locoregional Recurrence After Failure to Achieve Pathologic Complete Response to Neoadjuvant Chemotherapy in Triple-Negative Breast Cancer.

Gabani P, Merfeld E, Srivastava AJ, Weiner AA, Ochoa LL, Mullen D, Thomas MA, Margenthaler JA, Cyr AE, Peterson LL, Naughton MJ, Ma C, Zoberi I.

J Natl Compr Canc Netw. 2019 Apr 1;17(4):348-356. doi: 10.6004/jnccn.2018.7103.


Building a Scaffolded Research Experience for Undergraduates.

Reavis RD, Thomas MA.

Front Psychol. 2019 Mar 19;10:524. doi: 10.3389/fpsyg.2019.00524. eCollection 2019. No abstract available.


Comparison of plasma and urinary microRNA-483-5p for the diagnosis of adrenocortical malignancy.

Decmann A, Bancos I, Khanna A, Thomas MA, Turai P, Perge P, Pintér JZ, Tóth M, Patócs A, Igaz P.

J Biotechnol. 2019 May 20;297:49-53. doi: 10.1016/j.jbiotec.2019.03.017. Epub 2019 Mar 30.


Treatment response as predictor for brain metastasis in triple negative breast cancer: A score-based model.

Gabani P, Weiner AA, Hernandez-Aya LF, Khwaja S, Roach MC, Ochoa LL, Mullen D, Thomas MA, Matesa MA, Margenthaler JA, Cyr AE, Naughton MJ, Ma C, Sanati S, Zoberi I.

Breast J. 2019 May;25(3):363-372. doi: 10.1111/tbj.13230. Epub 2019 Mar 28.


Intestinal epithelial tight junction barrier regulation by autophagy-related protein ATG6/beclin 1.

Wong M, Ganapathy AS, Suchanec E, Laidler L, Ma T, Nighot P.

Am J Physiol Cell Physiol. 2019 May 1;316(5):C753-C765. doi: 10.1152/ajpcell.00246.2018. Epub 2019 Mar 20.


Clinical outcomes and patterns of care in the treatment of carcinosarcoma of the breast.

Kennedy WR, Gabani P, Acharya S, Thomas MA, Zoberi I.

Cancer Med. 2019 Apr;8(4):1379-1388. doi: 10.1002/cam4.1942. Epub 2019 Mar 12.


Acceptability of the Woman's Condom in a phase III multicenter open-label study.

Chen BA, Blithe DL, Muraguri GR, Lance AA, Carr BR, Jensen JT, Kimble TD, Murthy AS, Schreiber CA, Thomas MA, Walsh TL, Westhoff C, Burke AE.

Contraception. 2019 Jun;99(6):357-362. doi: 10.1016/j.contraception.2019.02.006. Epub 2019 Mar 6.


Responding to salinity in a rural African alluvial valley aquifer system: To boldly go beyond the world of hand-pumped groundwater supply?

Rivett MO, Budimir L, Mannix N, Miller AVM, Addison MJ, Moyo P, Wanangwa GJ, Phiri OL, Songola CE, Nhlema M, Thomas MAS, Polmanteer RT, Borge A, Kalin RM.

Sci Total Environ. 2019 Feb 25;653:1005-1024. doi: 10.1016/j.scitotenv.2018.10.337. Epub 2018 Oct 27.


In vivo 1 H MRS of human gallbladder bile in understanding the pathophysiology of primary sclerosing cholangitis (PSC): Immune-mediated disease versus bile acid-induced injury.

Mohajeri S, Bezabeh T, Ijare OB, King SB, Thomas MA, Minuk G, Lipschitz J, Kirkpatrick I, Micflikier AB, Summers R, Smith ICP.

NMR Biomed. 2019 May;32(5):e4065. doi: 10.1002/nbm.4065. Epub 2019 Feb 8.


Lipopolysaccharide-Induced Increase in Intestinal Permeability Is Mediated by TAK-1 Activation of IKK and MLCK/MYLK Gene.

Nighot M, Rawat M, Al-Sadi R, Castillo EF, Nighot P, Ma TY.

Am J Pathol. 2019 Apr;189(4):797-812. doi: 10.1016/j.ajpath.2018.12.016. Epub 2019 Feb 1.


Correction: A new microdeletion syndrome involving TBC1D24, ATP6V0C, and PDPK1 causes epilepsy, microcephaly, and developmental delay.

Mucha BE, Banka S, Ajeawung NF, Molidperee S, Chen GG, Koenig MK, Adejumo RB, Till M, Harbord M, Perrier R, Lemyre E, Boucher RM, Skotko BG, Waxler JL, Thomas MA, Hodge JC, Gecz J, Nicholl J, McGregor L, Linden T, Sisodiya SM, Sanlaville D, Cheung SW, Ernst C, Campeau PM.

Genet Med. 2019 Sep;21(9):2159-2160. doi: 10.1038/s41436-018-0413-x.


Delineation of a Cardiac Planning Organ-At-Risk Volume Using Real-Time Magnetic Resonance Imaging for Cardiac Protection in Thoracic and Breast Radiation Therapy.

Henke LE, Contreras JA, Mazur T, Green O, Daniel N, Lashmett H, Senter T, Gach HM, Ochoa L, Mutic S, Zoberi I, Bradley J, Robinson C, Thomas MA.

Pract Radiat Oncol. 2019 May;9(3):e298-e306. doi: 10.1016/j.prro.2018.12.004. Epub 2018 Dec 18.


MMP-9-induced increase in intestinal epithelial tight permeability is mediated by p38 kinase signaling pathway activation of MLCK gene.

Al-Sadi R, Youssef M, Rawat M, Guo S, Dokladny K, Haque M, Watterson MD, Ma TY.

Am J Physiol Gastrointest Liver Physiol. 2019 Feb 1;316(2):G278-G290. doi: 10.1152/ajpgi.00126.2018. Epub 2018 Dec 13.


Next-Generation Sequencing Using a Cardiac Gene Panel in Prenatally Diagnosed Cardiac Anomalies.

Lamont RE, Xi Y, Popko C, Lazier J, Bernier FP, Lauzon JL, Innes AM, Parboosingh JS, Thomas MA.

J Obstet Gynaecol Can. 2018 Nov;40(11):1417-1423. doi: 10.1016/j.jogc.2018.02.002.


Standardization and automation of quality assurance for high-dose-rate brachytherapy planning with application programming interface.

Cai B, Altman MB, Reynoso F, Garcia-Ramirez J, He A, Edward SS, Zoberi I, Thomas MA, Gay H, Mutic S, Zoberi JE.

Brachytherapy. 2019 Jan - Feb;18(1):108-114.e1. doi: 10.1016/j.brachy.2018.09.004. Epub 2018 Oct 29.


A Challenging Prenatal QF-PCR Rapid Aneuploidy Test Result Caused by a Maternally Inherited Triplication within Chromosome Xq26.2.

Inkster A, Thomas MA, Gamache NS, Chan M, Stenroos P, Chernos JE, Argiropoulos B.

Cytogenet Genome Res. 2018 Oct 5. doi: 10.1159/000492650. [Epub ahead of print]


A new microdeletion syndrome involving TBC1D24, ATP6V0C, and PDPK1 causes epilepsy, microcephaly, and developmental delay.

Mucha BE, Banka S, Ajeawung NF, Molidperee S, Chen GG, Koenig MK, Adejumo RB, Till M, Harbord M, Perrier R, Lemyre E, Boucher RM, Skotko BG, Waxler JL, Thomas MA, Hodge JC, Gecz J, Nicholl J, McGregor L, Linden T, Sisodiya SM, Sanlaville D, Cheung SW, Ernst C, Campeau PM.

Genet Med. 2019 May;21(5):1058-1064. doi: 10.1038/s41436-018-0290-3. Epub 2018 Sep 24. Erratum in: Genet Med. 2019 Jan 14;:.


Durability of Stroke Prevention with Carotid Endarterectomy and Carotid Stenting.

Thomas MA, Pearce WH, Rodriguez HE, Helenowski IB, Eskandari MK.

Surgery. 2018 Dec;164(6):1271-1278. doi: 10.1016/j.surg.2018.06.041. Epub 2018 Sep 18.


Clinical, Biochemical, and Radiological Characteristics of a Single-Center Retrospective Cohort of 705 Large Adrenal Tumors.

Iñiguez-Ariza NM, Kohlenberg JD, Delivanis DA, Hartman RP, Dean DS, Thomas MA, Shah MZ, Herndon J, McKenzie TJ, Arlt W, Young WF Jr, Bancos I.

Mayo Clin Proc Innov Qual Outcomes. 2017 Dec 21;2(1):30-39. doi: 10.1016/j.mayocpiqo.2017.11.002. eCollection 2018 Mar.


Magnetic Resonance Image-Guided Radiotherapy (MRIgRT): A 4.5-Year Clinical Experience.

Henke LE, Contreras JA, Green OL, Cai B, Kim H, Roach MC, Olsen JR, Fischer-Valuck B, Mullen DF, Kashani R, Thomas MA, Huang J, Zoberi I, Yang D, Rodriguez V, Bradley JD, Robinson CG, Parikh P, Mutic S, Michalski J.

Clin Oncol (R Coll Radiol). 2018 Nov;30(11):720-727. doi: 10.1016/j.clon.2018.08.010. Epub 2018 Sep 7.


ETS1 induces transforming growth factor β signaling and promotes epithelial-to-mesenchymal transition in prostate cancer cells.

Rodgers JJ, McClure R, Epis MR, Cohen RJ, Leedman PJ, Harvey JM; Australian Prostate Cancer BioResource, Thomas MA, Bentel JM.

J Cell Biochem. 2019 Jan;120(1):848-860. doi: 10.1002/jcb.27446. Epub 2018 Aug 30.


DTI-based upper limit of voxel free water fraction.

Macey PM, Thomas MA, Henderson LA.

Heliyon. 2018 Jul 20;4(7):e00700. doi: 10.1016/j.heliyon.2018.e00700. eCollection 2018 Jul.



Senthelal S, Thomas MA.

StatPearls [Internet]. Treasure Island (FL): StatPearls Publishing; 2019 Jan-.
2018 Nov 14.


The Solution Structure of CCL28 Reveals Structural Lability that Does Not Constrain Antifungal Activity.

Thomas MA, He J, Peterson FC, Huppler AR, Volkman BF.

J Mol Biol. 2018 Sep 14;430(18 Pt B):3266-3282. doi: 10.1016/j.jmb.2018.06.001. Epub 2018 Jun 15.


Expression of Programmed Death-Ligand 1 by Human Colonic CD90+ Stromal Cells Differs Between Ulcerative Colitis and Crohn's Disease and Determines Their Capacity to Suppress Th1 Cells.

Beswick EJ, Grim C, Singh A, Aguirre JE, Tafoya M, Qiu S, Rogler G, McKee R, Samedi V, Ma TY, Reyes VE, Powell DW, Pinchuk IV.

Front Immunol. 2018 May 30;9:1125. doi: 10.3389/fimmu.2018.01125. eCollection 2018.


Decoding the chemotactic signal.

Thomas MA, Kleist AB, Volkman BF.

J Leukoc Biol. 2018 Aug;104(2):359-374. doi: 10.1002/JLB.1MR0218-044. Epub 2018 Jun 6. Review.


Metabolite-cycled density-weighted concentric rings k-space trajectory (DW-CRT) enables high-resolution 1 H magnetic resonance spectroscopic imaging at 3-Tesla.

Steel A, Chiew M, Jezzard P, Voets NL, Plaha P, Thomas MA, Stagg CJ, Emir UE.

Sci Rep. 2018 May 17;8(1):7792. doi: 10.1038/s41598-018-26096-y.


Insulin Sensitivity and Glucose Homeostasis Can Be Influenced by Metabolic Acid Load.

Della Guardia L, Thomas MA, Cena H.

Nutrients. 2018 May 15;10(5). pii: E618. doi: 10.3390/nu10050618. Review.


Salivary kynurenic acid response to psychological stress: inverse relationship to cortical glutamate in schizophrenia.

Chiappelli J, Rowland LM, Notarangelo FM, Wijtenburg SA, Thomas MAR, Pocivavsek A, Jones A, Wisner K, Kochunov P, Schwarcz R, Hong LE.

Neuropsychopharmacology. 2018 Jul;43(8):1706-1711. doi: 10.1038/s41386-018-0072-2. Epub 2018 Apr 18.


Postponing Childbearing and Fertility Preservation in Young Professional Women.

Hurley EG, Ressler IB, Young S, Batcheller A, Thomas MA, DiPaola KB, Rios J.

South Med J. 2018 Apr;111(4):187-191. doi: 10.14423/SMJ.0000000000000789.


Influence of plasma cytokines on kynurenine and kynurenic acid in schizophrenia.

Chiappelli J, Notarangelo FM, Pocivavsek A, Thomas MAR, Rowland LM, Schwarcz R, Hong LE.

Neuropsychopharmacology. 2018 Jul;43(8):1675-1680. doi: 10.1038/s41386-018-0038-4. Epub 2018 Feb 27.


Obstructive sleep apnea and cortical thickness in females and males.

Macey PM, Haris N, Kumar R, Thomas MA, Woo MA, Harper RM.

PLoS One. 2018 Mar 6;13(3):e0193854. doi: 10.1371/journal.pone.0193854. eCollection 2018.


Practice guideline: joint CCMG-SOGC recommendations for the use of chromosomal microarray analysis for prenatal diagnosis and assessment of fetal loss in Canada.

Armour CM, Dougan SD, Brock JA, Chari R, Chodirker BN, DeBie I, Evans JA, Gibson WT, Kolomietz E, Nelson TN, Tihy F, Thomas MA, Stavropoulos DJ; On-Behalf-Of the Canadian College of Medical Geneticists.

J Med Genet. 2018 Apr;55(4):215-221. doi: 10.1136/jmedgenet-2017-105013. Epub 2018 Mar 1.


RNF8 and SCML2 cooperate to regulate ubiquitination and H3K27 acetylation for escape gene activation on the sex chromosomes.

Adams SR, Maezawa S, Alavattam KG, Abe H, Sakashita A, Shroder M, Broering TJ, Sroga Rios J, Thomas MA, Lin X, Price CM, Barski A, Andreassen PR, Namekawa SH.

PLoS Genet. 2018 Feb 20;14(2):e1007233. doi: 10.1371/journal.pgen.1007233. eCollection 2018 Feb.


Continuous dosing of a novel contraceptive vaginal ring releasing Nestorone® and estradiol: pharmacokinetics from a dose-finding study.

Jensen JT, Edelman AB, Chen BA, Archer DF, Barnhart KT, Thomas MA, Burke AE, Westhoff CL, Wan LS, Sitruk-Ware R, Kumar N, Variano B, Blithe DL.

Contraception. 2018 May;97(5):422-427. doi: 10.1016/j.contraception.2018.01.012. Epub 2018 Feb 2.


Assessment of Lipid and Metabolite Changes in Obese Calf Muscle Using Multi-Echo Echo-planar Correlated Spectroscopic Imaging.

Nagarajan R, Carpenter CL, Lee CC, Michael N, Sarma MK, Souza R, Xu E, Velan SS, Hahn TJ, Go VL, Thomas MA.

Sci Rep. 2017 Dec 11;7(1):17338. doi: 10.1038/s41598-017-17529-1.


Impact of hypercortisolism on skeletal muscle mass and adipose tissue mass in patients with adrenal adenomas.

Delivanis DA, Iñiguez-Ariza NM, Zeb MH, Moynagh MR, Takahashi N, McKenzie TJ, Thomas MA, Gogos C, Young WF, Bancos I, Kyriazopoulou V.

Clin Endocrinol (Oxf). 2018 Feb;88(2):209-216. doi: 10.1111/cen.13512. Epub 2017 Nov 29.


Long-term outcomes of APBI via multicatheter interstitial HDR brachytherapy: Results of a prospective single-institutional registry.

Gabani P, Cyr AE, Zoberi JE, Ochoa LL, Matesa MA, Thomas MA, Garcia J, Margenthaler JA, Naughton MJ, Ma C, Sanati S, Zoberi I.

Brachytherapy. 2018 Jan - Feb;17(1):171-180. doi: 10.1016/j.brachy.2017.09.009. Epub 2017 Oct 28.


Amenorrhea rates and predictors during 1 year of levonorgestrel 52 mg intrauterine system use.

Darney PD, Stuart GS, Thomas MA, Cwiak C, Olariu A, Creinin MD.

Contraception. 2018 Mar;97(3):210-214. doi: 10.1016/j.contraception.2017.10.005. Epub 2017 Oct 13.


AgRP knockdown blocks long-term appetitive, but not consummatory, feeding behaviors in Siberian hamsters.

Thomas MA, Tran V, Ryu V, Xue B, Bartness TJ.

Physiol Behav. 2018 Jun 1;190:61-70. doi: 10.1016/j.physbeh.2017.10.008. Epub 2017 Oct 12.


Mechanisms for AgRP neuron-mediated regulation of appetitive behaviors in rodents.

Thomas MA, Xue B.

Physiol Behav. 2018 Jun 1;190:34-42. doi: 10.1016/j.physbeh.2017.10.006. Epub 2017 Oct 12. Review.


Introduction to the Southern Medical Journal's Special Issue on Breast Cancer.

Thomas MA.

South Med J. 2017 Oct;110(10):605-606. doi: 10.14423/SMJ.0000000000000713. No abstract available.


Dysregulation of autism-associated synaptic proteins by psychoactive pharmaceuticals at environmental concentrations.

Kaushik G, Xia Y, Pfau JC, Thomas MA.

Neurosci Lett. 2017 Nov 20;661:143-148. doi: 10.1016/j.neulet.2017.09.058. Epub 2017 Sep 28.


Risk assessment to groundwater of pit latrine rural sanitation policy in developing country settings.

Back JO, Rivett MO, Hinz LB, Mackay N, Wanangwa GJ, Phiri OL, Songola CE, Thomas MAS, Kumwenda S, Nhlema M, Miller AVM, Kalin RM.

Sci Total Environ. 2018 Feb 1;613-614:592-610. doi: 10.1016/j.scitotenv.2017.09.071. Epub 2017 Sep 26.

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