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Nitrosyl Myoglobins and Their Nitrite Precursors: Crystal Structural and Quantum Mechanics and Molecular Mechanics Theoretical Investigations of Preferred Fe -NO Ligand Orientations in Myoglobin Distal Pockets.

Wang B, Shi Y, Tejero J, Powell SM, Thomas LM, Gladwin MT, Shiva S, Zhang Y, Richter-Addo GB.

Biochemistry. 2018 Aug 14;57(32):4788-4802. doi: 10.1021/acs.biochem.8b00542. Epub 2018 Jul 27.


Sampling molecular conformations and dynamics in a multiuser virtual reality framework.

O'Connor M, Deeks HM, Dawn E, Metatla O, Roudaut A, Sutton M, Thomas LM, Glowacki BR, Sage R, Tew P, Wonnacott M, Bates P, Mulholland AJ, Glowacki DR.

Sci Adv. 2018 Jun 29;4(6):eaat2731. doi: 10.1126/sciadv.aat2731. eCollection 2018 Jun.


NK cells inhibit Plasmodium falciparum growth in red blood cells via antibody-dependent cellular cytotoxicity.

Arora G, Hart GT, Manzella-Lapeira J, Doritchamou JY, Narum DL, Thomas LM, Brzostowski J, Rajagopalan S, Doumbo OK, Traore B, Miller LH, Pierce SK, Duffy PE, Crompton PD, Desai SA, Long EO.

Elife. 2018 Jun 26;7. pii: e36806. doi: 10.7554/eLife.36806.


An extraordinary case of recurrent stroke, disseminated thrombosis and endocarditis.

Thomas LM, Shaikh NA, Pradeep R.

BMJ Case Rep. 2018 Jun 4;2018. pii: bcr-2018-224172. doi: 10.1136/bcr-2018-224172.


Use of verbal autopsy and social autopsy in humanitarian crises.

Thomas LM, D'Ambruoso L, Balabanova D.

BMJ Glob Health. 2018 May 3;3(3):e000640. doi: 10.1136/bmjgh-2017-000640. eCollection 2018. Erratum in: BMJ Glob Health. 2018 Jun 9;3(3):e000640corr1.


Verbal autopsy in health policy and systems: a literature review.

Thomas LM, D'Ambruoso L, Balabanova D.

BMJ Glob Health. 2018 May 3;3(2):e000639. doi: 10.1136/bmjgh-2017-000639. eCollection 2018.


Contaminants of emerging concern presence and adverse effects in fish: A case study in the Laurentian Great Lakes.

Jorgenson ZG, Thomas LM, Elliott SM, Cavallin JE, Randolph EC, Choy SJ, Alvarez DA, Banda JA, Gefell DJ, Lee KE, Furlong ET, Schoenfuss HL.

Environ Pollut. 2018 May;236:718-733. doi: 10.1016/j.envpol.2018.01.070. Epub 2018 Feb 14.


Technique developments and performance analysis of chirped-probe-pulse femtosecond coherent anti-Stokes Raman scattering combustion thermometry.

Thomas LM, Satija A, Lucht RP.

Appl Opt. 2017 Nov 1;56(31):8797-8810. doi: 10.1364/AO.56.008797.


Contaminants of emerging concern in tributaries to the Laurentian Great Lakes: II. Biological consequences of exposure.

Thomas LM, Jorgenson ZG, Brigham ME, Choy SJ, Moore JN, Banda JA, Gefell DJ, Minarik TA, Schoenfuss HL.

PLoS One. 2017 Sep 27;12(9):e0184725. doi: 10.1371/journal.pone.0184725. eCollection 2017.


Nitrosoamphetamine binding to myoglobin and hemoglobin: Crystal structure of the H64A myoglobin-nitrosoamphetamine adduct.

Wang B, Powell SM, Guan Y, Xu N, Thomas LM, Richter-Addo GB.

Nitric Oxide. 2017 Jul 1;67:26-29. doi: 10.1016/j.niox.2017.04.012. Epub 2017 Apr 24.


Correction: Scaffold Functions of 14-3-3 Adaptors in B Cell Immunoglobulin Class Switch DNA Recombination.

Lam T, Thomas LM, White CA, Li G, Pone EJ, Xu Z, Casali P.

PLoS One. 2017 Mar 15;12(3):e0174195. doi: 10.1371/journal.pone.0174195. eCollection 2017.


An integrated approach for identifying priority contaminant in the Great Lakes Basin - Investigations in the Lower Green Bay/Fox River and Milwaukee Estuary areas of concern.

Li S, Villeneuve DL, Berninger JP, Blackwell BR, Cavallin JE, Hughes MN, Jensen KM, Jorgenson Z, Kahl MD, Schroeder AL, Stevens KE, Thomas LM, Weberg MA, Ankley GT.

Sci Total Environ. 2017 Feb 1;579:825-837. doi: 10.1016/j.scitotenv.2016.11.021. Epub 2016 Nov 18.


Crystal structures of two nitroreductases from hypervirulent Clostridium difficile and functionally related interactions with the antibiotic metronidazole.

Wang B, Powell SM, Hessami N, Najar FZ, Thomas LM, Karr EA, West AH, Richter-Addo GB.

Nitric Oxide. 2016 Nov 30;60:32-39. doi: 10.1016/j.niox.2016.09.003. Epub 2016 Sep 10.


Crystal structure and DNA binding activity of a PadR family transcription regulator from hypervirulent Clostridium difficile R20291.

Isom CE, Menon SK, Thomas LM, West AH, Richter-Addo GB, Karr EA.

BMC Microbiol. 2016 Oct 4;16(1):231.


Organometallic myoglobins: Formation of Fe-carbon bonds and distal pocket effects on aryl ligand conformations.

Wang B, Thomas LM, Richter-Addo GB.

J Inorg Biochem. 2016 Nov;164:1-4. doi: 10.1016/j.jinorgbio.2016.06.028. Epub 2016 Jun 24.


Ionomycin Treatment Renders NK Cells Hyporesponsive.

Romera-Cárdenas G, Thomas LM, Lopez-Cobo S, García-Cuesta EM, Long EO, Reyburn HT.

PLoS One. 2016 Mar 23;11(3):e0150998. doi: 10.1371/journal.pone.0150998. eCollection 2016.


Free-space optical communications research and demonstrations at the U.S. Naval Research Laboratory.

Rabinovich WS, Moore CI, Mahon R, Goetz PG, Burris HR, Ferraro MS, Murphy JL, Thomas LM, Gilbreath GC, Vilcheck M, Suite MR.

Appl Opt. 2015 Nov 1;54(31):F189-200. doi: 10.1364/AO.54.00F189.


InAlAs/InGaAs avalanche photodiode arrays for free space optical communication.

Ferraro MS, Clark WR, Rabinovich WS, Mahon R, Murphy JL, Goetz PG, Thomas LM, Burris HR, Moore CI, Waters WD, Vaccaro K, Krejca BD.

Appl Opt. 2015 Nov 1;54(31):F182-8. doi: 10.1364/AO.54.00F182.


Structures and Energetics of Four Adjacent G·U Pairs That Stabilize an RNA Helix.

Gu X, Mooers BH, Thomas LM, Malone J, Harris S, Schroeder SJ.

J Phys Chem B. 2015 Oct 22;119(42):13252-61. doi: 10.1021/acs.jpcb.5b06970. Epub 2015 Oct 12.


Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants.

Mou Y, Huang PS, Thomas LM, Mayo SL.

J Mol Biol. 2015 Aug 14;427(16):2697-706. doi: 10.1016/j.jmb.2015.06.006. Epub 2015 Jun 21.


Regional variation of the inwardly rectifying potassium current in the canine heart and the contributions to differences in action potential repolarization.

Cordeiro JM, Zeina T, Goodrow R, Kaplan AD, Thomas LM, Nesterenko VV, Treat JA, Hawel L 3rd, Byus C, Bett GC, Rasmusson RL, Panama BK.

J Mol Cell Cardiol. 2015 Jul;84:52-60. doi: 10.1016/j.yjmcc.2015.04.010. Epub 2015 Apr 15.


Current perspectives on natural killer cell education and tolerance: emerging roles for inhibitory receptors.

Thomas LM.

Immunotargets Ther. 2015 Mar 16;4:45-53. doi: 10.2147/ITT.S61498. eCollection 2015. Review.


Hyperscanning and avoidance in social anxiety disorder: the visual scanpath during public speaking.

Chen NT, Thomas LM, Clarke PJ, Hickie IB, Guastella AJ.

Psychiatry Res. 2015 Feb 28;225(3):667-72. doi: 10.1016/j.psychres.2014.11.025. Epub 2014 Nov 24.


Integrated assessment of runoff from livestock farming operations: Analytical chemistry, in vitro bioassays, and in vivo fish exposures.

Cavallin JE, Durhan EJ, Evans N, Jensen KM, Kahl MD, Kolpin DW, Kolodziej EP, Foreman WT, LaLone CA, Makynen EA, Seidl SM, Thomas LM, Villeneuve DL, Weberg MA, Wilson VS, Ankley GT.

Environ Toxicol Chem. 2014 Aug;33(8):1849-57. doi: 10.1002/etc.2627. Epub 2014 Jun 27. Erratum in: Environ Toxicol Chem. 2014 Nov;33(11):2646.


Scaffold functions of 14-3-3 adaptors in B cell immunoglobulin class switch DNA recombination.

Lam T, Thomas LM, White CA, Li G, Pone EJ, Xu Z, Casali P.

PLoS One. 2013 Nov 25;8(11):e80414. doi: 10.1371/journal.pone.0080414. eCollection 2013. Erratum in: PLoS One. 2017 Mar 15;12 (3):e0174195.


Degradation of human hemoglobin by organic C-nitroso compounds.

Yi J, Ye G, Thomas LM, Richter-Addo GB.

Chem Commun (Camb). 2013 Dec 11;49(95):11179-81. doi: 10.1039/c3cc46174b. Epub 2013 Oct 23.


Cutting edge: NK cell licensing modulates adhesion to target cells.

Thomas LM, Peterson ME, Long EO.

J Immunol. 2013 Oct 15;191(8):3981-5. doi: 10.4049/jimmunol.1301159. Epub 2013 Sep 13.


Structure of Escherichia coli AdhP (ethanol-inducible dehydrogenase) with bound NAD.

Thomas LM, Harper AR, Miner WA, Ajufo HO, Branscum KM, Kao L, Sims PA.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jul;69(Pt 7):730-2. doi: 10.1107/S1744309113015170. Epub 2013 Jun 27.


Developing predictive approaches to characterize adaptive responses of the reproductive endocrine axis to aromatase inhibition: I. Data generation in a small fish model.

Villeneuve DL, Breen M, Bencic DC, Cavallin JE, Jensen KM, Makynen EA, Thomas LM, Wehmas LC, Conolly RB, Ankley GT.

Toxicol Sci. 2013 Jun;133(2):225-33. doi: 10.1093/toxsci/kft068. Epub 2013 Mar 14.


Rev1 recruits ung to switch regions and enhances du glycosylation for immunoglobulin class switch DNA recombination.

Zan H, White CA, Thomas LM, Mai T, Li G, Xu Z, Zhang J, Casali P.

Cell Rep. 2012 Nov 29;2(5):1220-32. doi: 10.1016/j.celrep.2012.09.029. Epub 2012 Nov 8.


Skin lighteners, Black consumers and Jewish entrepreneurs in South Africa.

Thomas LM.

Hist Workshop J. 2012;73(1):259-83.


A time-course analysis of effects of the steroidogenesis inhibitor ketoconazole on components of the hypothalamic-pituitary-gonadal axis of fathead minnows.

Ankley GT, Cavallin JE, Durhan EJ, Jensen KM, Kahl MD, Makynen EA, Thomas LM, Wehmas LC, Villeneuve DL.

Aquat Toxicol. 2012 Jun 15;114-115:88-95. doi: 10.1016/j.aquatox.2012.02.012. Epub 2012 Feb 22.


Distal pocket control of nitrite binding in myoglobin.

Yi J, Thomas LM, Richter-Addo GB.

Angew Chem Int Ed Engl. 2012 Apr 10;51(15):3625-7. doi: 10.1002/anie.201200010. Epub 2012 Mar 1. No abstract available.


Iterative approach to computational enzyme design.

Privett HK, Kiss G, Lee TM, Blomberg R, Chica RA, Thomas LM, Hilvert D, Houk KN, Mayo SL.

Proc Natl Acad Sci U S A. 2012 Mar 6;109(10):3790-5. doi: 10.1073/pnas.1118082108. Epub 2012 Feb 22.


Evidence in support of lysine 77 and histidine 96 as acid-base catalytic residues in saccharopine dehydrogenase from Saccharomyces cerevisiae.

Kumar VP, Thomas LM, Bobyk KD, Andi B, Cook PF, West AH.

Biochemistry. 2012 Jan 31;51(4):857-66. doi: 10.1021/bi201808. Epub 2012 Jan 23.


Probability density of irradiance fluctuations observed over terrestrial ranges.

Mahon R, Moore CI, Burris HR, Ferraro M, Rabinovich WS, Suite M, Thomas LM.

Appl Opt. 2011 Dec 10;50(35):6476-83. doi: 10.1364/AO.50.006476.


Effects of a glucocorticoid receptor agonist, dexamethasone, on fathead minnow reproduction, growth, and development.

LaLone CA, Villeneuve DL, Olmstead AW, Medlock EK, Kahl MD, Jensen KM, Durhan EJ, Makynen EA, Blanksma CA, Cavallin JE, Thomas LM, Seidl SM, Skolness SY, Wehmas LC, Johnson RD, Ankley GT.

Environ Toxicol Chem. 2012 Mar;31(3):611-22. doi: 10.1002/etc.1729. Epub 2012 Feb 6.


Misuse of prescribed stimulant medication for ADHD and associated patterns of substance use: preliminary analysis among college students.

Sepúlveda DR, Thomas LM, McCabe SE, Cranford JA, Boyd CJ, Teter CJ.

J Pharm Pract. 2011 Dec;24(6):551-60. doi: 10.1177/0897190011426558. Epub 2011 Nov 17.


Crystallographic trapping of heme loss intermediates during the nitrite-induced degradation of human hemoglobin.

Yi J, Thomas LM, Musayev FN, Safo MK, Richter-Addo GB.

Biochemistry. 2011 Oct 4;50(39):8323-32. doi: 10.1021/bi2009322. Epub 2011 Sep 6.


Ecotoxicogenomics to support ecological risk assessment: a case study with bisphenol A in fish.

Villeneuve DL, Garcia-Reyero N, Escalon BL, Jensen KM, Cavallin JE, Makynen EA, Durhan EJ, Kahl MD, Thomas LM, Perkins EJ, Ankley GT.

Environ Sci Technol. 2012 Jan 3;46(1):51-9. doi: 10.1021/es201150a. Epub 2011 Aug 5.


Extracellular superoxide dismutase in macrophages augments bacterial killing by promoting phagocytosis.

Manni ML, Tomai LP, Norris CA, Thomas LM, Kelley EE, Salter RD, Crapo JD, Chang LY, Watkins SC, Piganelli JD, Oury TD.

Am J Pathol. 2011 Jun;178(6):2752-9. doi: 10.1016/j.ajpath.2011.02.007.


Structure of human R-state aquomethemoglobin at 2.0 Å resolution.

Yi J, Thomas LM, Richter-Addo GB.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Jun 1;67(Pt 6):647-51. doi: 10.1107/S1744309111012528. Epub 2011 May 24.


14-3-3 adaptor proteins recruit AID to 5'-AGCT-3'-rich switch regions for class switch recombination.

Xu Z, Fulop Z, Wu G, Pone EJ, Zhang J, Mai T, Thomas LM, Al-Qahtani A, White CA, Park SR, Steinacker P, Li Z, Yates J 3rd, Herron B, Otto M, Zan H, Fu H, Casali P.

Nat Struct Mol Biol. 2010 Sep;17(9):1124-35. doi: 10.1038/nsmb.1884. Epub 2010 Aug 22.


Activation of macrophages by P2X7-induced microvesicles from myeloid cells is mediated by phospholipids and is partially dependent on TLR4.

Thomas LM, Salter RD.

J Immunol. 2010 Sep 15;185(6):3740-9. doi: 10.4049/jimmunol.1001231. Epub 2010 Aug 13.


Third-party repackaging in hospital pharmacy unit dose acquisition.

Meller RD, Pazour JA, Thomas LM, Mason SJ, Root SE, Churchill WW.

Am J Health Syst Pharm. 2010 Jul 1;67(13):1108-14. doi: 10.2146/ajhp090184. No abstract available.


When myopathy strikes in a cancer patient.

Gopaluni S, Thomas LM, Shah C.

Gastrointest Cancer Res. 2009 Sep;3(5):212-4. No abstract available.


Cutaneous mast cell counts--what constitutes a 'normal' number?

O'Neill M, Thomas LM, Boyd AS.

J Cutan Pathol. 2010 Aug;37(8):919-21. doi: 10.1111/j.1600-0560.2009.01414.x. Epub 2009 Aug 27. No abstract available.


Cholesterol-dependent cytolysins induce rapid release of mature IL-1beta from murine macrophages in a NLRP3 inflammasome and cathepsin B-dependent manner.

Chu J, Thomas LM, Watkins SC, Franchi L, Núñez G, Salter RD.

J Leukoc Biol. 2009 Nov;86(5):1227-38. doi: 10.1189/jlb.0309164. Epub 2009 Aug 12.


Analysis of long-term measurements of laser propagation over the Chesapeake Bay.

Mahon R, Moore CI, Burris HR, Rabinovich WS, Stell M, Suite MR, Thomas LM.

Appl Opt. 2009 Apr 20;48(12):2388-400.


Resuscitation decisions among hospital physicians and intensivists.

Brims FJ, Kilminster S, Thomas LM.

Clin Med (Lond). 2009 Feb;9(1):16-20.


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