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Challenges Encountered in Placement of Ostomy Bag for Palliative Care in a Patient with Colorectal Cancer.

Kumar V, Kumawat N, Thomas JM, Kumar A, Sharma A, Kamal M.

Indian J Palliat Care. 2019 Jul-Sep;25(3):474-476. doi: 10.4103/IJPC.IJPC_23_19.


Development and Validation of a Polypharmacy Knowledge Assessment Instrument.

Thomas JM, Mecca MC, Niehoff KM, Mecca AP, Van Ness PH, Brienza R, Hyson A, Jeffery S.

Am J Pharm Educ. 2019 Jun;83(5):6435. doi: 10.5688/ajpe6435.


Altering duration of the presynchronization period in a long-term progestin-based estrus synchronization protocol for timed artificial insemination of beef heifers.

Knickmeyer ER, Thomas JM, Locke JWC, Bonacker RC, Ciernia LA, Ketchum JN, Ellersieck MR, Poock SE, Smith MF, Patterson DJ.

Theriogenology. 2019 Sep 15;136:66-71. doi: 10.1016/j.theriogenology.2019.06.027. Epub 2019 Jun 13.


Using repeated visual exposure, rewards and modelling in a mobile application to increase vegetable acceptance in children.

Farrow C, Belcher E, Coulthard H, Thomas JM, Lumsden J, Hakobyan L, Haycraft E.

Appetite. 2019 Oct 1;141:104327. doi: 10.1016/j.appet.2019.104327. Epub 2019 Jun 19.


Management of Traumatized Immature Vital Tooth: A Case Report.

Thomas JM, Arumugam EAP, Harris A, Ravi VV.

J Pharm Bioallied Sci. 2019 May;11(Suppl 2):S481-S484. doi: 10.4103/JPBS.JPBS_283_18.


Assessing the effects of vegetable consumption on the psychological health of healthy adults: a systematic review of prospective research.

Tuck NJ, Farrow C, Thomas JM.

Am J Clin Nutr. 2019 Jun 1. pii: nqz080. doi: 10.1093/ajcn/nqz080. [Epub ahead of print]


Nucleotide resolution sequencing of N4-acetylcytidine in RNA.

Thomas JM, Bryson KM, Meier JL.

Methods Enzymol. 2019;621:31-51. doi: 10.1016/bs.mie.2019.02.022. Epub 2019 Mar 12.


Evaluation of split-time artificial insemination following administration of a long or short-term progestin-based estrus synchronization protocol in beef heifers.

Knickmeyer ER, Thomas JM, Locke JWC, Bonacker RC, Ellersieck MR, Poock SE, Smith MF, Patterson DJ.

Theriogenology. 2019 Jul 15;133:179-186. doi: 10.1016/j.theriogenology.2019.04.011. Epub 2019 Apr 11.


Assessing an Interprofessional Polypharmacy and Deprescribing Educational Intervention for Primary Care Post-graduate Trainees: a Quantitative and Qualitative Evaluation.

Mecca MC, Thomas JM, Niehoff KM, Hyson A, Jeffery SM, Sellinger J, Mecca AP, Van Ness PH, Fried TR, Brienza R.

J Gen Intern Med. 2019 Jul;34(7):1220-1227. doi: 10.1007/s11606-019-04932-9. Epub 2019 Apr 10.


Prognosis Reconsidered in Light of Ancient Insights-From Hippocrates to Modern Medicine.

Thomas JM, Cooney LM Jr, Fried TR.

JAMA Intern Med. 2019 Jun 1;179(6):820-823. doi: 10.1001/jamainternmed.2019.0302.


The Impact of Signet Ring Cell Differentiation on Outcome in Patients with Esophageal and Gastroesophageal Junction Adenocarcinoma.

van Hootegem SJM, Smithers BM, Gotley DC, Brosda S, Thomson IG, Thomas JM, Gartside M, van Lanschot JJB, Lagarde SM, Wijnhoven BPL, Barbour AP.

Ann Surg Oncol. 2019 Aug;26(8):2375-2384. doi: 10.1245/s10434-019-07322-x. Epub 2019 Apr 2.


Does Late Hip Dysplasia Occur After Normal Ultrasound Screening in Breech Babies?

Morris AR, Thomas JMC, Reading IC, Clarke NMP.

J Pediatr Orthop. 2019 Apr;39(4):187-192. doi: 10.1097/BPO.0000000000000903.


Prospective cohort study of ultrasound surveillance of regional lymph nodes in patients with intermediate-risk cutaneous melanoma.

Hayes AJ, Moskovic E, O'Meara K, Smith HG, Pope RJE, Larkin J, Thomas JM.

Br J Surg. 2019 May;106(6):729-734. doi: 10.1002/bjs.11112. Epub 2019 Feb 28.


Initiative to Minimize Pharmaceutical Risk in Older Veterans (IMPROVE) Polypharmacy Clinic.

Gardner AL, Thomas JM, Mecca MC, Hyson A, Niehoff KM, Jeffery S, Sellinger J, Brienza R.

Fed Pract. 2018 Nov;35(11):40-47.


Metabolic Regulation of the Epitranscriptome.

Thomas JM, Batista PJ, Meier JL.

ACS Chem Biol. 2019 Mar 15;14(3):316-324. doi: 10.1021/acschembio.8b00951. Epub 2019 Feb 1.


YpdA, a putative bacillithiol disulfide reductase, contributes to cellular redox homeostasis and virulence in Staphylococcus aureus.

Mikheyeva IV, Thomas JM, Kolar SL, Corvaglia AR, Gaϊa N, Leo S, Francois P, Liu GY, Rawat M, Cheung AL.

Mol Microbiol. 2019 Apr;111(4):1039-1056. doi: 10.1111/mmi.14207. Epub 2019 Feb 17.


A Bump-Hole Approach for Directed RNA Editing.

Monteleone LR, Matthews MM, Palumbo CM, Thomas JM, Zheng Y, Chiang Y, Fisher AJ, Beal PA.

Cell Chem Biol. 2019 Feb 21;26(2):269-277.e5. doi: 10.1016/j.chembiol.2018.10.025. Epub 2018 Dec 20.


Correction to: Genetic and epigenetic mechanisms in the development of arteriovenous malformations in the brain.

Thomas JM, Surendran S, Abraham M, Rajavelu A, Kartha CC.

Clin Epigenetics. 2018 Oct 17;10(1):124. doi: 10.1186/s13148-018-0560-6.


Evaluation of SexedULTRA 4M™ sex-sorted semen in timed artificial insemination programs for mature beef cows.

Thomas JM, Locke JWC, Bonacker RC, Knickmeyer ER, Wilson DJ, Vishwanath R, Arnett AM, Smith MF, Patterson DJ.

Theriogenology. 2019 Jan 1;123:100-107. doi: 10.1016/j.theriogenology.2018.09.039. Epub 2018 Sep 27.


Two-step recruitment process optimizes retention in FLEX clinical trial.

Standiford DA, Morwessel N, Bishop FK, Thomas JM, Smith E, Crandell J, Driscoll KA, Hunter CM, Kichler JC, Maahs DM, Mayer-Davis EJ, Seid M.

Contemp Clin Trials Commun. 2018 Sep 21;12:68-75. doi: 10.1016/j.conctc.2018.09.005. eCollection 2018 Dec.


Two observational studies examining the effect of a social norm and a health message on the purchase of vegetables in student canteen settings.

Collins EIM, Thomas JM, Robinson E, Aveyard P, Jebb SA, Herman CP, Higgs S.

Appetite. 2019 Jan 1;132:122-130. doi: 10.1016/j.appet.2018.09.024. Epub 2018 Oct 1.


A Chemical Signature for Cytidine Acetylation in RNA.

Thomas JM, Briney CA, Nance KD, Lopez JE, Thorpe AL, Fox SD, Bortolin-Cavaille ML, Sas-Chen A, Arango D, Oberdoerffer S, Cavaille J, Andresson T, Meier JL.

J Am Chem Soc. 2018 Oct 10;140(40):12667-12670. doi: 10.1021/jacs.8b06636. Epub 2018 Sep 25.


Efficacy of the Flexible Lifestyles Empowering Change intervention on metabolic and psychosocial outcomes in adolescents with type 1 diabetes (FLEX): a randomised controlled trial.

Mayer-Davis EJ, Maahs DM, Seid M, Crandell J, Bishop FK, Driscoll KA, Hunter CM, Kichler JC, Standiford D, Thomas JM; FLEX Study Group.

Lancet Child Adolesc Health. 2018 Sep;2(9):635-646. doi: 10.1016/S2352-4642(18)30208-6. Epub 2018 Jul 30.


Regional chemotherapy by isolated limb perfusion prior to surgery compared with surgery and post-operative radiotherapy for primary, locally advanced extremity sarcoma: a comparison of matched cohorts.

Jakob J, Smith HG, Wilkinson MJ, Pencavel T, Miah AB, Thomas JM, Tunn PU, Pilz LR, Strauss DC, Hohenberger P, Hayes AJ.

Clin Sarcoma Res. 2018 Jul 2;8:12. doi: 10.1186/s13569-018-0098-6. eCollection 2018.


SIMBAD: a sequence-independent molecular-replacement pipeline.

Simpkin AJ, Simkovic F, Thomas JMH, Savko M, Lebedev A, Uski V, Ballard C, Wojdyr M, Wu R, Sanishvili R, Xu Y, Lisa MN, Buschiazzo A, Shepard W, Rigden DJ, Keegan RM.

Acta Crystallogr D Struct Biol. 2018 Jul 1;74(Pt 7):595-605. doi: 10.1107/S2059798318005752. Epub 2018 Jun 8.


Gene expression analysis of nidus of cerebral arteriovenous malformations reveals vascular structures with deficient differentiation and maturation.

Thomas JM, Surendran S, Abraham M, Sasankan D, Bhaadri S, Rajavelu A, Kartha CC.

PLoS One. 2018 Jun 13;13(6):e0198617. doi: 10.1371/journal.pone.0198617. eCollection 2018.


Neoadjuvant chemotherapy or chemoradiotherapy for adenocarcinoma of the esophagus.

Visser E, Edholm D, Smithers BM, Thomson IG, Burmeister BH, Walpole ET, Gotley DC, Joubert WL, Atkinson V, Mai T, Thomas JM, Barbour AP.

J Surg Oncol. 2018 Jun;117(8):1687-1696. doi: 10.1002/jso.25089. Epub 2018 May 28.


Pseudomonas aeruginosa gshA Mutant Is Defective in Biofilm Formation, Swarming, and Pyocyanin Production.

Van Laar TA, Esani S, Birges TJ, Hazen B, Thomas JM, Rawat M.

mSphere. 2018 Apr 18;3(2). pii: e00155-18. doi: 10.1128/mSphere.00155-18. Print 2018 Apr 25.


Graded exercise self-help for chronic fatigue syndrome in GETSET - Authors' reply.

Clark LV, Pesola F, Thomas JM, Vergara-Williamson M, Beynon M, White PD.

Lancet. 2018 Mar 24;391(10126):1162. doi: 10.1016/S0140-6736(18)30684-6. No abstract available.


Ensembles generated from crystal structures of single distant homologues solve challenging molecular-replacement cases in AMPLE.

Rigden DJ, Thomas JMH, Simkovic F, Simpkin A, Winn MD, Mayans O, Keegan RM.

Acta Crystallogr D Struct Biol. 2018 Mar 1;74(Pt 3):183-193. doi: 10.1107/S2059798318002310. Epub 2018 Mar 2.


Recent developments in MrBUMP: better search-model preparation, graphical interaction with search models, and solution improvement and assessment.

Keegan RM, McNicholas SJ, Thomas JMH, Simpkin AJ, Simkovic F, Uski V, Ballard CC, Winn MD, Wilson KS, Rigden DJ.

Acta Crystallogr D Struct Biol. 2018 Mar 1;74(Pt 3):167-182. doi: 10.1107/S2059798318003455. Epub 2018 Mar 6.


Anatomy, Abdomen and Pevlis, Foramen of Winslow (Omental, Epiploic).

Thomas JM, Van Fossen K.

StatPearls [Internet]. Treasure Island (FL): StatPearls Publishing; 2019 Jan-.
2018 Dec 15.


Defining the Scope of Prognosis: Primary Care Clinicians' Perspectives on Predicting the Future Health of Older Adults.

Thomas JM, Fried TR.

J Pain Symptom Manage. 2018 May;55(5):1269-1275.e1. doi: 10.1016/j.jpainsymman.2018.01.017. Epub 2018 Feb 5.


Large scale ab initio modeling of structurally uncharacterized antimicrobial peptides reveals known and novel folds.

Kozic M, Fox SJ, Thomas JM, Verma CS, Rigden DJ.

Proteins. 2018 May;86(5):548-565. doi: 10.1002/prot.25473. Epub 2018 Feb 18.


Protective Effect of Anti-Phosphatidylserine Antibody in a Guinea Pig Model of Advanced Hemorrhagic Arenavirus Infection.

Thomas JM, Thorpe PE.

Open Microbiol J. 2017 Oct 30;11:303-315. doi: 10.2174/1874285801711010303. eCollection 2017.


The Drosophila hep pathway mediates Lrrk2-induced neurodegeneration.

Yang D, Thomas JM, Li T, Lee Y, Liu Z, Smith WW.

Biochem Cell Biol. 2018 Aug;96(4):441-449. doi: 10.1139/bcb-2017-0262. Epub 2017 Dec 21.


Delimiting Strategic Zones for the Development of Fall Armyworm (Lepidoptera: Noctuidae) on Corn in the State of Florida.

Garcia AG, Godoy WAC, Thomas JMG, Nagoshi RN, Meagher RL.

J Econ Entomol. 2018 Feb 9;111(1):120-126. doi: 10.1093/jee/tox329.


Differential Regulation of Zfp30 Expression in Murine Airway Epithelia Through Altered Binding of ZFP148 to rs51434084.

Laudermilk LT, Thomas JM, Kelada SN.

G3 (Bethesda). 2018 Feb 2;8(2):687-693. doi: 10.1534/g3.117.300507.


Approaches to ab initio molecular replacement of α-helical transmembrane proteins.

Thomas JMH, Simkovic F, Keegan R, Mayans O, Zhang C, Zhang Y, Rigden DJ.

Acta Crystallogr D Struct Biol. 2017 Dec 1;73(Pt 12):985-996. doi: 10.1107/S2059798317016436. Epub 2017 Nov 22.


Reconstructing Tone Sequences from Functional Magnetic Resonance Imaging Blood-Oxygen Level Dependent Responses within Human Primary Auditory Cortex.

Chang KH, Thomas JM, Boynton GM, Fine I.

Front Psychol. 2017 Nov 14;8:1983. doi: 10.3389/fpsyg.2017.01983. eCollection 2017.


Providing sustainable catalytic solutions for a rapidly changing world: a summary and recommendations for urgent future action.

Thomas JM.

Philos Trans A Math Phys Eng Sci. 2018 Jan 13;376(2110). pii: 20170068. doi: 10.1098/rsta.2017.0068.


Machine learning meets complex networks via coalescent embedding in the hyperbolic space.

Muscoloni A, Thomas JM, Ciucci S, Bianconi G, Cannistraci CV.

Nat Commun. 2017 Nov 20;8(1):1615. doi: 10.1038/s41467-017-01825-5.


Circadian actin dynamics drive rhythmic fibroblast mobilization during wound healing.

Hoyle NP, Seinkmane E, Putker M, Feeney KA, Krogager TP, Chesham JE, Bray LK, Thomas JM, Dunn K, Blaikley J, O'Neill JS.

Sci Transl Med. 2017 Nov 8;9(415). pii: eaal2774. doi: 10.1126/scitranslmed.aal2774.


Programming membrane permeability using integrated membrane pores and blockers as molecular regulators.

Thomas JM, Friddin MS, Ces O, Elani Y.

Chem Commun (Camb). 2017 Nov 14;53(91):12282-12285. doi: 10.1039/c7cc05423h.


The 5-HT2C receptor agonist meta-chlorophenylpiperazine (mCPP) reduces palatable food consumption and BOLD fMRI responses to food images in healthy female volunteers.

Thomas JM, Dourish CT, Tomlinson J, Hassan-Smith Z, Hansen PC, Higgs S.

Psychopharmacology (Berl). 2018 Jan;235(1):257-267. doi: 10.1007/s00213-017-4764-9. Epub 2017 Oct 28.


Interactions between metabolic, reward and cognitive processes in appetite control: Implications for novel weight management therapies.

Higgs S, Spetter MS, Thomas JM, Rotshtein P, Lee M, Hallschmid M, Dourish CT.

J Psychopharmacol. 2017 Nov;31(11):1460-1474. doi: 10.1177/0269881117736917. Epub 2017 Oct 26. Review.


Profiling Cytidine Acetylation with Specific Affinity and Reactivity.

Sinclair WR, Arango D, Shrimp JH, Zengeya TT, Thomas JM, Montgomery DC, Fox SD, Andresson T, Oberdoerffer S, Meier JL.

ACS Chem Biol. 2017 Dec 15;12(12):2922-2926. doi: 10.1021/acschembio.7b00734. Epub 2017 Oct 17.


[Communicating with elderly patients].

Thomas JM, Thomas P.

Rev Med Brux. 2017;38(4):381-384. French.


[Specificity of communication in general practice].

Thomas P, Thomas JM.

Rev Med Brux. 2017;38(4):377-380. French.


Impact of intraoperative factor concentrates on blood product transfusions during orthotopic liver transplantation.

Colavecchia AC, Cohen DA, Harris JE, Thomas JM, Lindberg S, Leveque C, Salazar E.

Transfusion. 2017 Dec;57(12):3026-3034. doi: 10.1111/trf.14328. Epub 2017 Sep 28.


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