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Human Factors and the Impact on Patient Safety: Tools and Training.

Call RC, Ruskin KJ, Thomas DA, O'Connor MF.

Int Anesthesiol Clin. 2019 Summer;57(3):25-34. doi: 10.1097/AIA.0000000000000234. No abstract available.


A robotic platform for flow synthesis of organic compounds informed by AI planning.

Coley CW, Thomas DA 3rd, Lummiss JAM, Jaworski JN, Breen CP, Schultz V, Hart T, Fishman JS, Rogers L, Gao H, Hicklin RW, Plehiers PP, Byington J, Piotti JS, Green WH, Hart AJ, Jamison TF, Jensen KF.

Science. 2019 Aug 9;365(6453). pii: eaax1566. doi: 10.1126/science.aax1566.


Improving Care for Sickle Cell Pain Crisis Using a Multidisciplinary Approach.

Balsamo L, Shabanova V, Carbonella J, Szondy MV, Kalbfeld K, Thomas DA, Santucci K, Grossman M, Pashankar F.

Pediatrics. 2019 May;143(5). pii: e20182218. doi: 10.1542/peds.2018-2218. Epub 2019 Apr 3.


Addressing the opioid crisis: social and behavioral research contributions at the National Institutes of Health.

Spaniol ED, Smith WB, Thomas DA, Clark DB.

Transl Behav Med. 2019 Apr 1. pii: ibz038. doi: 10.1093/tbm/ibz038. [Epub ahead of print]


Characterization of a trans-trans Carbonic Acid-Fluoride Complex by Infrared Action Spectroscopy in Helium Nanodroplets.

Thomas DA, Mucha E, Lettow M, Meijer G, Rossi M, von Helden G.

J Am Chem Soc. 2019 Apr 10;141(14):5815-5823. doi: 10.1021/jacs.8b13542. Epub 2019 Mar 27.


The role of the mobile proton in fucose migration.

Lettow M, Mucha E, Manz C, Thomas DA, Marianski M, Meijer G, von Helden G, Pagel K.

Anal Bioanal Chem. 2019 Jul;411(19):4637-4645. doi: 10.1007/s00216-019-01657-w. Epub 2019 Mar 2.


Clinical outcomes after major hepatectomy are acceptable in low-volume centers in the Caribbean.

Cawich SO, Maharaj R, Naraynsingh V, Pearce N, Francis W, Bonadie KO, Thomas DA.

World J Hepatol. 2019 Feb 27;11(2):199-207. doi: 10.4254/wjh.v11.i2.199.


Fragment-Based Covalent Ligand Screening Enables Rapid Discovery of Inhibitors for the RBR E3 Ubiquitin Ligase HOIP.

Johansson H, Isabella Tsai YC, Fantom K, Chung CW, Kümper S, Martino L, Thomas DA, Eberl HC, Muelbaier M, House D, Rittinger K.

J Am Chem Soc. 2019 Feb 13;141(6):2703-2712. doi: 10.1021/jacs.8b13193. Epub 2019 Feb 4.


Premature mortality from all causes and drug poisonings in the USA according to socioeconomic status and rurality: an analysis of death certificate data by county from 2000-15.

Shiels MS, Berrington de González A, Best AF, Chen Y, Chernyavskiy P, Hartge P, Khan SQ, Pérez-Stable EJ, Rodriquez EJ, Spillane S, Thomas DA, Withrow D, Freedman ND.

Lancet Public Health. 2019 Feb;4(2):e97-e106. doi: 10.1016/S2468-2667(18)30208-1. Epub 2019 Jan 15.


Coverage of Nonpharmacologic Treatments for Low Back Pain Among US Public and Private Insurers.

Heyward J, Jones CM, Compton WM, Lin DH, Losby JL, Murimi IB, Baldwin GT, Ballreich JM, Thomas DA, Bicket MC, Porter L, Tierce JC, Alexander GC.

JAMA Netw Open. 2018 Oct 5;1(6):e183044. doi: 10.1001/jamanetworkopen.2018.3044.


Prescription Drug Coverage for Treatment of Low Back Pain Among US Medicaid, Medicare Advantage, and Commercial Insurers.

Lin DH, Jones CM, Compton WM, Heyward J, Losby JL, Murimi IB, Baldwin GT, Ballreich JM, Thomas DA, Bicket M, Porter L, Tierce JC, Alexander GC.

JAMA Netw Open. 2018 Jun 1;1(2):e180235. doi: 10.1001/jamanetworkopen.2018.0235.


Publisher Correction: Unravelling the structure of glycosyl cations via cold-ion infrared spectroscopy.

Mucha E, Marianski M, Xu FF, Thomas DA, Meijer G, von Helden G, Seeberger PH, Pagel K.

Nat Commun. 2018 Nov 8;9(1):4767. doi: 10.1038/s41467-018-07184-z.


Unravelling the structure of glycosyl cations via cold-ion infrared spectroscopy.

Mucha E, Marianski M, Xu FF, Thomas DA, Meijer G, von Helden G, Seeberger PH, Pagel K.

Nat Commun. 2018 Oct 9;9(1):4174. doi: 10.1038/s41467-018-06764-3. Erratum in: Nat Commun. 2018 Nov 8;9(1):4767.


Infant and Youth Mortality Trends by Race/Ethnicity and Cause of Death in the United States.

Khan SQ, Berrington de Gonzalez A, Best AF, Chen Y, Haozous EA, Rodriquez EJ, Spillane S, Thomas DA, Withrow D, Freedman ND, Shiels MS.

JAMA Pediatr. 2018 Dec 1;172(12):e183317. doi: 10.1001/jamapediatrics.2018.3317. Epub 2018 Dec 3.


A Retrospective Study of Chronic Kidney Disease Burden in Saskatchewan's First Nations People.

Thomas DA, Huang A, McCarron MCE, Kappel JE, Holden RM, Yeates KE, Richardson BR.

Can J Kidney Health Dis. 2018 Sep 17;5:2054358118799689. doi: 10.1177/2054358118799689. eCollection 2018.


Ground-State Structure of the Proton-Bound Formate Dimer by Cold-Ion Infrared Action Spectroscopy.

Thomas DA, Marianski M, Mucha E, Meijer G, Johnson MA, von Helden G.

Angew Chem Int Ed Engl. 2018 Aug 13;57(33):10615-10619. doi: 10.1002/anie.201805436. Epub 2018 Jul 12.


Perioperative Management of Patients with Addiction to Opioid and Non-opioid Medications.

Thomas DA, Boominathan P, Goswami J, Mukherjee S, Vadivelu N.

Curr Pain Headache Rep. 2018 Jun 14;22(7):52. doi: 10.1007/s11916-018-0704-6. Review.


Fucose Migration in Intact Protonated Glycan Ions: A Universal Phenomenon in Mass Spectrometry.

Mucha E, Lettow M, Marianski M, Thomas DA, Struwe WB, Harvey DJ, Meijer G, Seeberger PH, von Helden G, Pagel K.

Angew Chem Int Ed Engl. 2018 Jun 18;57(25):7440-7443. doi: 10.1002/anie.201801418. Epub 2018 May 25.


Vibrational Spectroscopy of Fluoroformate, FCO2-, Trapped in Helium Nanodroplets.

Thomas DA, Mucha E, Gewinner S, Schöllkopf W, Meijer G, von Helden G.

J Phys Chem Lett. 2018 May 3;9(9):2305-2310. doi: 10.1021/acs.jpclett.8b00664. Epub 2018 Apr 23.


Advanced Continuous Flow Platform for On-Demand Pharmaceutical Manufacturing.

Zhang P, Weeranoppanant N, Thomas DA, Tahara K, Stelzer T, Russell MG, O'Mahony M, Myerson AS, Lin H, Kelly LP, Jensen KF, Jamison TF, Dai C, Cui Y, Briggs N, Beingessner RL, Adamo A.

Chemistry. 2018 Feb 21;24(11):2776-2784. doi: 10.1002/chem.201706004. Epub 2018 Jan 31.


Selectively Targeting the Kinome-Conserved Lysine of PI3Kδ as a General Approach to Covalent Kinase Inhibition.

Dalton SE, Dittus L, Thomas DA, Convery MA, Nunes J, Bush JT, Evans JP, Werner T, Bantscheff M, Murphy JA, Campos S.

J Am Chem Soc. 2018 Jan 24;140(3):932-939. doi: 10.1021/jacs.7b08979. Epub 2018 Jan 9.


Continuous purification of active pharmaceutical ingredients utilizing polymer membrane surface wettability.

Imbrogno J, Rogers L, Thomas DA, Jensen KF.

Chem Commun (Camb). 2017 Dec 19;54(1):70-73. doi: 10.1039/c7cc08218e.


Hospitalization costs and resource allocation in cholecystectomy with use of intravenous versus oral acetaminophen.

Hansen RN, Pham AT, Böing EA, Lovelace B, Wan GJ, Thomas DA, Fontes ML.

Curr Med Res Opin. 2018 Sep;34(9):1549-1555. doi: 10.1080/03007995.2017.1412301. Epub 2018 Jan 4.


From PIM1 to PI3Kδ via GSK3β: Target Hopping through the Kinome.

Henley ZA, Bax BD, Inglesby LM, Champigny A, Gaines S, Faulder P, Le J, Thomas DA, Washio Y, Baldwin IR.

ACS Med Chem Lett. 2017 Sep 7;8(10):1093-1098. doi: 10.1021/acsmedchemlett.7b00296. eCollection 2017 Oct 12.


Modified hanging manoeuvre facilitates inferior vena cava resection and reconstruction during extended right hepatectomy: A technical case report.

Cawich SO, Thomas DAW, Ragoonanan V, Ramjit C, Narinesingh D, Naraynsingh V, Pearce N.

Mol Clin Oncol. 2017 Oct;7(4):687-692. doi: 10.3892/mco.2017.1352. Epub 2017 Jul 28.


A phase I study of moxetumomab pasudotox in adults with relapsed or refractory B-cell acute lymphoblastic leukaemia.

Short NJ, Kantarjian H, Jabbour E, Cortes JE, Thomas DA, Rytting ME, Daver N, Alvarado Y, Konopleva M, Kebriaei P, Wierda WG, DiNardo CD, Bivins C, McCue D, Richie MA, Ravandi F.

Br J Haematol. 2018 Aug;182(3):442-444. doi: 10.1111/bjh.14806. Epub 2017 Jun 14. No abstract available.


Glycan Fingerprinting via Cold-Ion Infrared Spectroscopy.

Mucha E, González Flórez AI, Marianski M, Thomas DA, Hoffmann W, Struwe WB, Hahm HS, Gewinner S, Schöllkopf W, Seeberger PH, von Helden G, Pagel K.

Angew Chem Int Ed Engl. 2017 Sep 4;56(37):11248-11251. doi: 10.1002/anie.201702896. Epub 2017 Jun 8.


Outcomes of adults with relapsed or refractory Burkitt and high-grade B-cell leukemia/lymphoma.

Short NJ, Kantarjian HM, Ko H, Khoury JD, Ravandi F, Thomas DA, Garcia-Manero G, Khouri M, Cortes JE, Wierda WG, Verstovsek S, Estrov Z, Ferrajoli A, Thompson PA, Pierce S, O'Brien SM, Jabbour E.

Am J Hematol. 2017 Jun;92(6):E114-E117. doi: 10.1002/ajh.24720. Epub 2017 Apr 18. No abstract available.


A fully automated flow-based approach for accelerated peptide synthesis.

Mijalis AJ, Thomas DA 3rd, Simon MD, Adamo A, Beaumont R, Jensen KF, Pentelute BL.

Nat Chem Biol. 2017 May;13(5):464-466. doi: 10.1038/nchembio.2318. Epub 2017 Feb 28.


Concept of the Ambulatory Pain Physician.

Thomas DA, Chang D, Zhu R, Rayaz H, Vadivelu N.

Curr Pain Headache Rep. 2017 Jan;21(1):7. doi: 10.1007/s11916-017-0611-2. Review.


Preliminary measurements of the edge magnetic field pitch from 2-D Doppler backscattering in MAST and NSTX-U (invited).

Vann RG, Brunner KJ, Ellis R, Taylor G, Thomas DA.

Rev Sci Instrum. 2016 Nov;87(11):11D902.


Modifications to the synthetic aperture microwave imaging diagnostic.

Brunner KJ, Chorley JC, Dipper NA, Naylor G, Sharples RM, Taylor G, Thomas DA, Vann RG.

Rev Sci Instrum. 2016 Nov;87(11):11E129.


A Management Algorithm for Retained Rectal Foreign Bodies.

Cawich SO, Thomas DA, Mohammed F, Bobb NJ, Williams D, Naraynsingh V.

Am J Mens Health. 2017 May;11(3):684-692. doi: 10.1177/1557988316680929. Epub 2016 Nov 29.


Real-Time Studies of Iron Oxalate-Mediated Oxidation of Glycolaldehyde as a Model for Photochemical Aging of Aqueous Tropospheric Aerosols.

Thomas DA, Coggon MM, Lignell H, Schilling KA, Zhang X, Schwantes RH, Flagan RC, Seinfeld JH, Beauchamp JL.

Environ Sci Technol. 2016 Nov 15;50(22):12241-12249. Epub 2016 Oct 25.


Differential impact of minimal residual disease negativity according to the salvage status in patients with relapsed/refractory B-cell acute lymphoblastic leukemia.

Jabbour E, Short NJ, Jorgensen JL, Yilmaz M, Ravandi F, Wang SA, Thomas DA, Khoury J, Champlin RE, Khouri I, Kebriaei P, O'Brien SM, Garcia-Manero G, Cortes JE, Sasaki K, Dinardo CD, Kadia TM, Jain N, Konopleva M, Garris R, Kantarjian HM.

Cancer. 2017 Jan 1;123(2):294-302. doi: 10.1002/cncr.30264. Epub 2016 Sep 7.


Analogues of Marine Guanidine Alkaloids Are in Vitro Effective against Trypanosoma cruzi and Selectively Eliminate Leishmania (L.) infantum Intracellular Amastigotes.

Martins LF, Mesquita JT, Pinto EG, Costa-Silva TA, Borborema SE, Galisteo Junior AJ, Neves BJ, Andrade CH, Shuhaib ZA, Bennett EL, Black GP, Harper PM, Evans DM, Fituri HS, Leyland JP, Martin C, Roberts TD, Thornhill AJ, Vale SA, Howard-Jones A, Thomas DA, Williams HL, Overman LE, Berlinck RG, Murphy PJ, Tempone AG.

J Nat Prod. 2016 Sep 23;79(9):2202-10. doi: 10.1021/acs.jnatprod.6b00256. Epub 2016 Sep 2.


Prognostic significance of day 14 bone marrow evaluation in adults with Philadelphia chromosome-negative acute lymphoblastic leukemia.

Short NJ, Kantarjian HM, Sasaki K, Cortes JE, Ravandi F, Thomas DA, Garcia-Manero G, Khouri I, Kebriaei P, Champlin RE, Pierce S, Issa GC, Konopleva M, Kadia TM, Bueso-Ramos C, Khoury JD, Jain N, O'Brien SM, Jabbour E.

Cancer. 2016 Dec 15;122(24):3812-3820. doi: 10.1002/cncr.30262. Epub 2016 Aug 10.


Hyper-CVAD plus ponatinib versus hyper-CVAD plus dasatinib as frontline therapy for patients with Philadelphia chromosome-positive acute lymphoblastic leukemia: A propensity score analysis.

Sasaki K, Jabbour EJ, Ravandi F, Short NJ, Thomas DA, Garcia-Manero G, Daver NG, Kadia TM, Konopleva MY, Jain N, Issa GC, Jeanis V, Moore HG, Garris RS, Pemmaraju N, Cortes JE, O'Brien SM, Kantarjian HM.

Cancer. 2016 Dec 1;122(23):3650-3656. doi: 10.1002/cncr.30231. Epub 2016 Aug 1.


Eradicating mass spectrometric glycan rearrangement by utilizing free radicals.

Desai N, Thomas DA, Lee J, Gao J, Beauchamp JL.

Chem Sci. 2016 Aug 1;7(8):5390-5397. doi: 10.1039/c6sc01371f. Epub 2016 May 5.


Final results of a single institution experience with a pediatric-based regimen, the augmented Berlin-Frankfurt-Münster, in adolescents and young adults with acute lymphoblastic leukemia, and comparison to the hyper-CVAD regimen.

Rytting ME, Jabbour EJ, Jorgensen JL, Ravandi F, Franklin AR, Kadia TM, Pemmaraju N, Daver NG, Ferrajoli A, Garcia-Manero G, Konopleva MY, Borthakur G, Garris R, Wang S, Pierce S, Schroeder K, Kornblau SM, Thomas DA, Cortes JE, O'Brien SM, Kantarjian HM.

Am J Hematol. 2016 Aug;91(8):819-23. doi: 10.1002/ajh.24419. Epub 2016 Jun 30.


Phase I study of evofosfamide, an investigational hypoxia-activated prodrug, in patients with advanced leukemia.

Badar T, Handisides DR, Benito JM, Richie MA, Borthakur G, Jabbour E, Harutyunyan K, Konoplev S, Faderl S, Kroll S, Andreeff M, Pearce T, Kantarjian HM, Cortes JE, Thomas DA, Konopleva M.

Am J Hematol. 2016 Aug;91(8):800-5. doi: 10.1002/ajh.24415. Epub 2016 Jun 25.


Efficacy and Safety of Nonopioid Analgesics in Perioperative Pain Control.

Thomas DA, West M, Legler A, Maslin B, Kim RK, Vadivelu N.

Curr Drug Saf. 2016;11(3):196-205. Review.


Role of Alternative Therapies for Chronic Pain Syndromes.

Thomas DA, Maslin B, Legler A, Springer E, Asgerally A, Vadivelu N.

Curr Pain Headache Rep. 2016 May;20(5):29. doi: 10.1007/s11916-016-0562-z. Review.


Pre-BCR signaling in precursor B-cell acute lymphoblastic leukemia regulates PI3K/AKT, FOXO1 and MYC, and can be targeted by SYK inhibition.

Köhrer S, Havranek O, Seyfried F, Hurtz C, Coffey GP, Kim E, Ten Hacken E, Jäger U, Vanura K, O'Brien S, Thomas DA, Kantarjian H, Ghosh D, Wang Z, Zhang M, Ma W, Jumaa H, Debatin KM, Müschen M, Meyer LH, Davis RE, Burger JA.

Leukemia. 2016 Jun;30(6):1246-54. doi: 10.1038/leu.2016.9. Epub 2016 Feb 5.


MLL-Rearranged Acute Lymphoblastic Leukemias Activate BCL-2 through H3K79 Methylation and Are Sensitive to the BCL-2-Specific Antagonist ABT-199.

Benito JM, Godfrey L, Kojima K, Hogdal L, Wunderlich M, Geng H, Marzo I, Harutyunyan KG, Golfman L, North P, Kerry J, Ballabio E, Chonghaile TN, Gonzalo O, Qiu Y, Jeremias I, Debose L, O'Brien E, Ma H, Zhou P, Jacamo R, Park E, Coombes KR, Zhang N, Thomas DA, O'Brien S, Kantarjian HM, Leverson JD, Kornblau SM, Andreeff M, Müschen M, Zweidler-McKay PA, Mulloy JC, Letai A, Milne TA, Konopleva M.

Cell Rep. 2015 Dec 29;13(12):2715-27. doi: 10.1016/j.celrep.2015.12.003. Epub 2015 Dec 17.


Minimal residual disease assessed by multi-parameter flow cytometry is highly prognostic in adult patients with acute lymphoblastic leukaemia.

Ravandi F, Jorgensen JL, O'Brien SM, Jabbour E, Thomas DA, Borthakur G, Garris R, Huang X, Garcia-Manero G, Burger JA, Ferrajoli A, Wierda W, Kadia T, Jain N, Wang SA, Konoplev S, Kebriaei P, Champlin RE, McCue D, Estrov Z, Cortes JE, Kantarjian HM.

Br J Haematol. 2016 Feb;172(3):392-400. doi: 10.1111/bjh.13834. Epub 2015 Oct 22.


Optimization of Novel Indazoles as Highly Potent and Selective Inhibitors of Phosphoinositide 3-Kinase δ for the Treatment of Respiratory Disease.

Down K, Amour A, Baldwin IR, Cooper AW, Deakin AM, Felton LM, Guntrip SB, Hardy C, Harrison ZA, Jones KL, Jones P, Keeling SE, Le J, Livia S, Lucas F, Lunniss CJ, Parr NJ, Robinson E, Rowland P, Smith S, Thomas DA, Vitulli G, Washio Y, Hamblin JN.

J Med Chem. 2015 Sep 24;58(18):7381-99. doi: 10.1021/acs.jmedchem.5b00767. Epub 2015 Sep 3.


Mechanisms and energetics of free radical initiated disulfide bond cleavage in model peptides and insulin by mass spectrometry.

Sohn CH, Gao J, Thomas DA, Kim TY, Goddard Iii WA, Beauchamp JL.

Chem Sci. 2015 Aug 1;6(8):4550-4560. doi: 10.1039/c5sc01305d. Epub 2015 May 20.


B-Lymphoblastic Leukemia in Patients With Chronic Lymphocytic Leukemia: A Report of Four Cases.

Chakhachiro Z, Yin CC, Abruzzo LV, Aladily TN, Barron LL, Banks HE, Thomas DA, Keating M, Medeiros LJ, Huh YO.

Am J Clin Pathol. 2015 Aug;144(2):333-40. doi: 10.1309/AJCPXE5VMONMVLZ0.


New developments in acute lymphoblastic leukemia.

Douer D, Thomas DA.

Clin Adv Hematol Oncol. 2014 Jun;12(6 Suppl 12):13-22. Review.


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