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Splice-Junction-Based Mapping of Alternative Isoforms in the Human Proteome.

Lau E, Han Y, Williams DR, Thomas CT, Shrestha R, Wu JC, Lam MPY.

Cell Rep. 2019 Dec 10;29(11):3751-3765.e5. doi: 10.1016/j.celrep.2019.11.026.


Trends in Renal Tumor Surgery in the United States and Germany Between 2006 and 2014: Organ Preservation Rate Is Improving.

Flegar L, Groeben C, Koch R, Baunacke M, Borkowetz A, Kraywinkel K, Thomas C, Huber J.

Ann Surg Oncol. 2019 Dec 10. doi: 10.1245/s10434-019-08108-x. [Epub ahead of print]


The Impact of Genetic Variations in ADORA2A in the Association between Caffeine Consumption and Sleep.

Erblang M, Drogou C, Gomez-Merino D, Metlaine A, Boland A, Deleuze JF, Thomas C, Sauvet F, Chennaoui M.

Genes (Basel). 2019 Dec 6;10(12). pii: E1021. doi: 10.3390/genes10121021.


Evidence for alternative exhaled elimination profiles of disinfection by-products and potential markers of airway responses to swimming in a chlorinated pool environment.

Heaney LM, Kang S, Turner MA, Lindley MR, Thomas CP.

Indoor Air. 2019 Dec 8. doi: 10.1111/ina.12630. [Epub ahead of print]


The impact of clinical pharmacy services on pneumococcal vaccine frequency and appropriateness in a family medicine clinic.

Stewart-Lynch AL, Albert B, Bryan C, Graveno M, Roper RI, Schneider S, Thomas C, Covvey JR.

J Am Pharm Assoc (2003). 2019 Dec 5. pii: S1544-3191(19)30508-4. doi: 10.1016/j.japh.2019.11.002. [Epub ahead of print]


High-intensity exercise in the evening does not disrupt sleep in endurance runners.

Thomas C, Jones H, Whitworth-Turner C, Louis J.

Eur J Appl Physiol. 2019 Dec 7. doi: 10.1007/s00421-019-04280-w. [Epub ahead of print]


A Branchial Cyst in a Diamond Python (Morelia spilota).

Cloup E, Thomas C, Cooper JE.

J Comp Pathol. 2019 Nov;173:92-95. doi: 10.1016/j.jcpa.2019.10.007. Epub 2019 Nov 20.


DGCR8 microprocessor defect characterizes familial multinodular goiter with schwannomatosis.

Rivera B, Nadaf J, Fahiminiya S, Apellaniz-Ruiz M, Saskin A, Chong AS, Sharma S, Wagener R, Revil T, Condello V, Harra Z, Hamel N, Sabbaghian N, Muchantef K, Thomas C, de Kock L, Hébert-Blouin MN, Bassenden AV, Rabenstein H, Mete O, Paschke R, Pusztaszeri MP, Paulus W, Berghuis A, Ragoussis J, Nikiforov YE, Siebert R, Albrecht S, Turcotte R, Hasselblatt M, Fabian MR, Foulkes WD.

J Clin Invest. 2019 Dec 5. pii: 130206. doi: 10.1172/JCI130206. [Epub ahead of print]


Facing Uncertainty.

Thomas C, Vleugels RA, Kwiatkowski DJ, Levy B, Loscalzo J.

N Engl J Med. 2019 Dec 5;381(23):2253-2259. doi: 10.1056/NEJMcps1906037. No abstract available.


Fulminant MS Reactivation Following Combined Fingolimod Cessation and Yellow Fever Vaccination.

Rolfes L, Pawlitzki M, Pfeuffer S, Thomas C, Schmidt-Chanasit J, Gross CC, Schulte-Mecklenbeck A, Wiendl H, Meuth SG, M Grauer O, Ruck T.

Int J Mol Sci. 2019 Nov 28;20(23). pii: E5985. doi: 10.3390/ijms20235985.


Reply by Authors.

Baunacke M, Schmidt ML, Groeben C, Borkowetz A, Thomas C, Koch R, Chun FKH, Ihrig A, Weissbach L, Huber J.

J Urol. 2019 Dec 3:101097JU000000000000054103. doi: 10.1097/JU.0000000000000541.03. [Epub ahead of print] No abstract available.


A 1-year survey of catheter-related infections in a pediatric university hospital: A prospective study.

Broudic M, Bodet LM, Dumont R, Joram N, Jacqmarcq O, Caillon J, Flamant C, Thomas C, Tallet A, Piloquet H, Lepelletier D, Gras-Le Guen C, Launay E.

Arch Pediatr. 2019 Nov 29. pii: S0929-693X(19)30199-X. doi: 10.1016/j.arcped.2019.11.004. [Epub ahead of print]


VOCCluster: Untargeted Metabolomics Feature Clustering Approach for Clinical Breath Gas Chromatography - Mass Spectrometry Data.

Alkhalifah Y, Phillips I, Soltoggio A, Darnley K, Nailon WH, McLaren D, Eddleston M, Thomas CLP, Salman D.

Anal Chem. 2019 Dec 2. doi: 10.1021/acs.analchem.9b03084. [Epub ahead of print]


Diverse school community engagement with the North Carolina active routes to school project: a diffusion study.

LaJeunesse S, Thompson S, Pullen-Seufert N, Kolbe MB, Heiny S, Thomas C, Johnson ER.

Int J Behav Nutr Phys Act. 2019 Nov 29;16(1):118. doi: 10.1186/s12966-019-0889-z.


Retinal Ganglion Cells Die by Necroptotic Mechanisms in a Site-Specific Manner in a Rat Blunt Ocular Injury Model.

Thomas CN, Thompson AM, Ahmed Z, Blanch RJ.

Cells. 2019 Nov 26;8(12). pii: E1517. doi: 10.3390/cells8121517.


Lymphatic mapping with SPECT-CT for evaluation of contralateral drainage in lateralized oropharyngeal cancers using an awake injection technique.

Thomas CM, Khan MN, Mohan R, Hendler A, Hosni A, Chepeha DB, Goldstein DP, Cooper RM, de Almeida JR.

Head Neck. 2019 Nov 28. doi: 10.1002/hed.26011. [Epub ahead of print]


Facing Uncertainty.

Thomas C, Vaidya A, Kwiatkowski DJ, Rao DA, Vleugels RA.

N Engl J Med. 2019 Nov 28;381(22):e39. doi: 10.1056/NEJMimc1905882. No abstract available.


Molecular subgrouping of primary pineal parenchymal tumors reveals distinct subtypes correlated with clinical parameters and genetic alterations.

Pfaff E, Aichmüller C, Sill M, Stichel D, Snuderl M, Karajannis MA, Schuhmann MU, Schittenhelm J, Hasselblatt M, Thomas C, Korshunov A, Rhizova M, Wittmann A, Kaufhold A, Iskar M, Ketteler P, Lohmann D, Orr BA, Ellison DW, von Hoff K, Mynarek M, Rutkowski S, Sahm F, von Deimling A, Lichter P, Kool M, Zapatka M, Pfister SM, Jones DTW.

Acta Neuropathol. 2019 Nov 25. doi: 10.1007/s00401-019-02101-0. [Epub ahead of print]


Are father depression and masculinity associated with father perceptions of maternal gatekeeping?

Thomas CR, Holmes EK.

J Fam Psychol. 2019 Nov 21. doi: 10.1037/fam0000604. [Epub ahead of print]


Therapeutic strategies for diffuse midline glioma from high-throughput combination drug screening.

Lin GL, Wilson KM, Ceribelli M, Stanton BZ, Woo PJ, Kreimer S, Qin EY, Zhang X, Lennon J, Nagaraja S, Morris PJ, Quezada M, Gillespie SM, Duveau DY, Michalowski AM, Shinn P, Guha R, Ferrer M, Klumpp-Thomas C, Michael S, McKnight C, Minhas P, Itkin Z, Raabe EH, Chen L, Ghanem R, Geraghty AC, Ni L, Andreasson KI, Vitanza NA, Warren KE, Thomas CJ, Monje M.

Sci Transl Med. 2019 Nov 20;11(519). pii: eaaw0064. doi: 10.1126/scitranslmed.aaw0064.


A Single Salt Bridge in VIM-20 Increases Protein Stability and Antibiotic Resistance under Low-Zinc Conditions.

Cheng Z, Shurina BA, Bethel CR, Thomas PW, Marshall SH, Thomas CA, Yang K, Kimble RL, Montgomery JS, Orischak MG, Miller CM, Tennenbaum JL, Nix JC, Tierney DL, Fast W, Bonomo RA, Page RC, Crowder MW.

MBio. 2019 Nov 19;10(6). pii: e02412-19. doi: 10.1128/mBio.02412-19.


The United States' potential blood donor pool: updating the prevalence of donor-exclusion factors on the pool of potential donors.

To L, Dunnington T, Thomas C, Love K, McCullough J, Riley W.

Transfusion. 2019 Nov 19. doi: 10.1111/trf.15573. [Epub ahead of print] Review.


Digital Segmentation of Priority Populations in Public Health.

Evans WD, Thomas CN, Favatas D, Smyser J, Briggs J.

Health Educ Behav. 2019 Dec;46(2_suppl):81-89. doi: 10.1177/1090198119871246.


Disease Sites.

Chandra RA, Kachnic LA, Thomas CR Jr.

Hematol Oncol Clin North Am. 2020 Feb;34(1):xv-xvi. doi: 10.1016/j.hoc.2019.09.011. Epub 2019 Oct 28. No abstract available.


Targeted broad-based genetic testing by next-generation sequencing informs diagnosis and facilitates management in patients with kidney diseases.

Mansilla MA, Sompallae RR, Nishimura CJ, Kwitek AE, Kimble MJ, Freese ME, Campbell CA, Smith RJ, Thomas CP.

Nephrol Dial Transplant. 2019 Nov 18. pii: gfz173. doi: 10.1093/ndt/gfz173. [Epub ahead of print]


Desmoplastic myxoid tumor, SMARCB1-mutant: clinical, histopathological and molecular characterization of a pineal region tumor encountered in adolescents and adults.

Thomas C, Wefers A, Bens S, Nemes K, Agaimy A, Oyen F, Vogelgesang S, Rodriguez FJ, Brett FM, McLendon R, Bodi I, Burel-Vandenbos F, Keyvani K, Tippelt S, Poulsen FR, Lipp ES, Giannini C, Reifenberger G, Kuchelmeister K, Pietsch T, Kordes U, Siebert R, Frühwald MC, Johann PD, Sill M, Kool M, von Deimling A, Paulus W, Hasselblatt M.

Acta Neuropathol. 2019 Nov 16. doi: 10.1007/s00401-019-02094-w. [Epub ahead of print]


Adding diffusion ordered NMR spectroscopy (DOSY) to the arsenal for characterizing paramagnetic complexes.

Crockett MP, Zhang H, Thomas CM, Byers JA.

Chem Commun (Camb). 2019 Nov 28;55(96):14426-14429. doi: 10.1039/c9cc08229h.


Assessment of Health Facilities for Airborne Infection Control Practices and Adherence to National Airborne Infection Control Guidelines: A Study from Kerala, Southern India.

Raj A, Ramakrishnan D, Thomas CRMT, Mavila AD, Rajiv M, Suseela RPB.

Indian J Community Med. 2019 Oct;44(Suppl 1):S23-S26. doi: 10.4103/ijcm.IJCM_25_19.


Guidance on the use of MRI for treatment planning in radiotherapy clinical trials.

Johnstone RI, Guerrero-Urbano T, Michaelidou A, Greener T, Miles E, Eaton D, Thomas C.

Br J Radiol. 2019 Dec 5:20190161. doi: 10.1259/bjr.20190161. [Epub ahead of print]


eIF4A supports an oncogenic translation program in pancreatic ductal adenocarcinoma.

Chan K, Robert F, Oertlin C, Kapeller-Libermann D, Avizonis D, Gutierrez J, Handly-Santana A, Doubrovin M, Park J, Schoepfer C, Da Silva B, Yao M, Gorton F, Shi J, Thomas CJ, Brown LE, Porco JA Jr, Pollak M, Larsson O, Pelletier J, Chio IIC.

Nat Commun. 2019 Nov 13;10(1):5151. doi: 10.1038/s41467-019-13086-5.


[Apalutamide for metastatic, castration-sensitive prostate cancer].

Thomas C.

Urologe A. 2019 Dec;58(12):1496-1497. doi: 10.1007/s00120-019-01071-1. German. No abstract available.


Moth biomass increases and decreases over 50 years in Britain.

Macgregor CJ, Williams JH, Bell JR, Thomas CD.

Nat Ecol Evol. 2019 Dec;3(12):1645-1649. doi: 10.1038/s41559-019-1028-6. Epub 2019 Nov 11.


Decreasing incidence of upper age restriction enrollment criteria among cancer clinical trials.

Ludmir EB, Subbiah IM, Mainwaring W, Miller AB, Lin TA, Jethanandani A, Espinoza AF, Mandel JJ, Fang P, Smith BD, Smith GL, Pinnix CC, Sedrak MS, Kimmick GG, Stinchcombe TE, Jagsi R, Thomas CR Jr, Fuller CD, VanderWalde NA.

J Geriatr Oncol. 2019 Nov 8. pii: S1879-4068(19)30348-0. doi: 10.1016/j.jgo.2019.11.001. [Epub ahead of print]


Diagnosis and pathologic characteristics of medullary thyroid carcinoma-review of current guidelines.

Thomas CM, Asa SL, Ezzat S, Sawka AM, Goldstein D.

Curr Oncol. 2019 Oct;26(5):338-344. doi: 10.3747/co.26.5539. Epub 2019 Oct 1. Review.


A Geospatial Analysis of Health, Mental Health, and Stressful Community Contexts in Los Angeles County.

Robles B, Thomas CS, Lai ES, Kuo T.

Prev Chronic Dis. 2019 Nov 7;16:E150. doi: 10.5888/pcd16.190138.


Potentially Excess Deaths from the Five Leading Causes of Death in Metropolitan and Nonmetropolitan Counties - United States, 2010-2017.

Garcia MC, Rossen LM, Bastian B, Faul M, Dowling NF, Thomas CC, Schieb L, Hong Y, Yoon PW, Iademarco MF.

MMWR Surveill Summ. 2019 Nov 8;68(10):1-11. doi: 10.15585/mmwr.ss6810a1.


Science and society.

Armstrong A, Daw R, Hansell C, Mossinger J, Pariente N, Shadan S, Thomas C, Weiss U.

Nature. 2019 Nov;575(7781):63. doi: 10.1038/d41586-019-03365-y. No abstract available.


Macrophage fatty acid metabolism and atherosclerosis: The rise of PUFAs.

Ménégaut L, Jalil A, Thomas C, Masson D.

Atherosclerosis. 2019 Dec;291:52-61. doi: 10.1016/j.atherosclerosis.2019.10.002. Epub 2019 Oct 10. Review.


Fatty acids getting NAD+ about cardiometabolic diseases.

Jalil A, Thomas C, Masson D.

Curr Opin Lipidol. 2019 Dec;30(6):486-487. doi: 10.1097/MOL.0000000000000637. No abstract available.


Urinary cotinine is as good a biomarker as serum cotinine for cigarette smoking exposure and lung cancer risk prediction.

Thomas CE, Wang R, Adams-Haduch J, Murphy SE, Ueland PM, Midttun O, Brennan P, Johannson M, Gao YT, Yuan JM.

Cancer Epidemiol Biomarkers Prev. 2019 Nov 4. pii: cebp.0653.2019. doi: 10.1158/1055-9965.EPI-19-0653. [Epub ahead of print]


Navigation-guided osteotomies improve margin delineation in tumors involving the sinonasal area: A preclinical study.

Ferrari M, Daly MJ, Douglas CM, Chan HHL, Qiu J, Deganello A, Taboni S, Thomas CM, Sahovaler A, Jethwa AR, Hasan W, Nicolai P, Gilbert RW, Irish JC.

Oral Oncol. 2019 Nov 1;99:104463. doi: 10.1016/j.oraloncology.2019.104463. [Epub ahead of print]


Time requirements for management of exposure and information cases by one regional poison center.

Beuhler MC, Thomas C.

Clin Toxicol (Phila). 2019 Nov 4:1-4. doi: 10.1080/15563650.2019.1676897. [Epub ahead of print]


Molecular characterization of histopathological ependymoma variants.

Neumann JE, Spohn M, Obrecht D, Mynarek M, Thomas C, Hasselblatt M, Dorostkar MM, Wefers AK, Frank S, Monoranu CM, Koch A, Witt H, Kool M, Pajtler KW, Rutkowski S, Glatzel M, Schüller U.

Acta Neuropathol. 2019 Nov 2. doi: 10.1007/s00401-019-02090-0. [Epub ahead of print]


Current Issues and Techniques.

Chandra RA, Kachnic LA, Thomas CR Jr.

Hematol Oncol Clin North Am. 2019 Dec;33(6):xiii-xiv. doi: 10.1016/j.hoc.2019.09.001. Epub 2019 Oct 1. No abstract available.


The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.

Davis JJ, Wattam AR, Aziz RK, Brettin T, Butler R, Butler RM, Chlenski P, Conrad N, Dickerman A, Dietrich EM, Gabbard JL, Gerdes S, Guard A, Kenyon RW, Machi D, Mao C, Murphy-Olson D, Nguyen M, Nordberg EK, Olsen GJ, Olson RD, Overbeek JC, Overbeek R, Parrello B, Pusch GD, Shukla M, Thomas C, VanOeffelen M, Vonstein V, Warren AS, Xia F, Xie D, Yoo H, Stevens R.

Nucleic Acids Res. 2019 Oct 31. pii: gkz943. doi: 10.1093/nar/gkz943. [Epub ahead of print]


Long-Term Mortality in Patients with Positive Lymph Nodes at the Time of Radical Prostatectomy.

Froehner M, Koch R, Farahzadi S, Heberling U, Borkowetz A, Twelker L, Baretton GB, Wirth MP, Thomas C.

Urol Int. 2019;103(4):427-432. doi: 10.1159/000500961. Epub 2019 Oct 29.


Toward the combined optimization of dynamic axes (CODA) for stereotactic radiotherapy and radiosurgery using fixed couch trajectories.

MacDonald RL, Syme A, Little B, Ward L, Thomas CG.

Med Phys. 2019 Oct 28. doi: 10.1002/mp.13887. [Epub ahead of print]


Identification of Racial Inequities in Access to Specialized Inpatient Heart Failure Care at an Academic Medical Center.

Eberly LA, Richterman A, Beckett AG, Wispelwey B, Marsh RH, Cleveland Manchanda EC, Chang CY, Glynn RJ, Brooks KC, Boxer R, Kakoza R, Goldsmith J, Loscalzo J, Morse M, Lewis EF, Abel S, Adams A, Anaya J, Andrews EH, Atkinson B, Avutu V, Bachorik A, Badri O, Bailey M, Baird K, Bakshi S, Balaban D, Barshop K, Baumrin E, Bayomy O, Beamesderfer J, Becker N, Berg DD, Berman AN, Blum SM, Boardman AP, Boden K, Bonacci RA, Brown S, Campbell K, Case S, Cetrone E, Charrow A, Chiang D, Clark D, Cohen AJ, Cooper A, Cordova T, Cuneo CN, de Feria AA, Deffenbacher K, DeFilippis EM, DeGregorio G, Deutsch AJ, Diephuis B, Divakaran S, Dorschner P, Downing N, Drescher C, D'Silva KM, Dunbar P, Duong D, Earp S, Eckhardt C, Elman SA, England R, Everett K, Fedotova N, Feingold-Link T, Ferreira M, Fisher H, Foo P, Foote M, Franco I, Gilliland T, Greb J, Greco K, Grewal S, Grin B, Growdon ME, Guercio B, Hahn CK, Hasselfeld B, Haydu EJ, Hermes Z, Hildick-Smith G, Holcomb Z, Holroyd K, Horton L, Huang G, Jablonski S, Jacobs D, Jain N, Japa S, Joseph R, Kalashnikova M, Kalwani N, Kang D, Karan A, Katz JT, Kellner D, Kidia K, Kim JH, Knowles SM, Kolbe L, Kore I, Koullias Y, Kuye I, Lang J, Lawlor M, Lechner MG, Lee K, Lee S, Lee Z, Limaye N, Lin-Beckford S, Lipsyc M, Little J, Loewenthal J, Logaraj R, Lopez DM, Loriaux D, Lu Y, Ma K, Marukian N, Matias W, Mayers JR, McConnell I, McLaughlin M, Meade C, Meador C, Mehta A, Messenger E, Michaelidis C, Mirsky J, Mitten E, Mueller A, Mullur J, Munir A, Murphy E, Nagami E, Natarajan A, Nsahlai M, Nze C, Okwara N, Olds P, Paez R, Pardo M, Patel S, Petersen A, Phelan L, Pimenta E, Pipilas D, Plovanich M, Pong D, Powers BW, Rao A, Ramirez Batlle H, Ramsis M, Reichardt A, Reiger S, Rengarajan M, Rico S, Rome BN, Rosales R, Rotenstein L, Roy A, Royston S, Rozansky H, Rudder M, Ryan CE, Salgado S, Sanchez P, Schulte J, Sekar A, Semenkovich N, Shannon E, Shaw N, Shorten AB, Shrauner W, Sinnenberg L, Smithy JW, Snyder G, Sreekrishnan A, Stabenau H, Stavrou E, Stergachis A, Stern R, Stone A, Tabrizi S, Tanyos S, Thomas C, Thun H, Torres-Lockhart K, Tran A, Treasure C, Tsai FD, Tsaur S, Tschirhart E, Tuwatananurak J, Venkateswaran RV, Vishnevetsky A, Wahl L, Wall A, Wallace F, Walsh E, Wang P, Ward HB, Warner LN, Weeks LD, Weiskopf K, Wengrod J, Williams JN, Winkler M, Wong JL, Worster D, Wright A, Wunsch C, Wynter JS, Yarbrough C, Yau WY, Yazdi D, Yeh J, Yialamas MA, Yozamp N, Zambrotta M, Zon R.

Circ Heart Fail. 2019 Nov;12(11):e006214. doi: 10.1161/CIRCHEARTFAILURE.119.006214. Epub 2019 Oct 29.


Climate-induced phenology shifts linked to range expansions in species with multiple reproductive cycles per year.

Macgregor CJ, Thomas CD, Roy DB, Beaumont MA, Bell JR, Brereton T, Bridle JR, Dytham C, Fox R, Gotthard K, Hoffmann AA, Martin G, Middlebrook I, Nylin S, Platts PJ, Rasteiro R, Saccheri IJ, Villoutreix R, Wheat CW, Hill JK.

Nat Commun. 2019 Oct 24;10(1):4455. doi: 10.1038/s41467-019-12479-w.


Socioeconomic Status-Related Parameters as Predictors of Competing (Non-Bladder Cancer) Mortality after Radical Cystectomy.

Froehner M, Muallah D, Koch R, Hübler M, Borkowetz A, Heberling U, Huber J, Wirth MP, Thomas C.

Urol Int. 2019 Oct 22:1-8. doi: 10.1159/000502781. [Epub ahead of print]


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