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Predominant cleavage of proteins N-terminal to serines and threonines using scandium(III) triflate.

Koehler CJ, Thiede B.

J Biol Inorg Chem. 2019 Oct 30. doi: 10.1007/s00775-019-01733-7. [Epub ahead of print]


Armadillo repeat-containing protein 1 is a dual localization protein associated with mitochondrial intermembrane space bridging complex.

Wagner F, Kunz TC, Chowdhury SR, Thiede B, Fraunholz M, Eger D, Kozjak-Pavlovic V.

PLoS One. 2019 Oct 23;14(10):e0218303. doi: 10.1371/journal.pone.0218303. eCollection 2019.


RAF kinases are stabilized and required for dendritic cell differentiation and function.

Riegel K, Schlöder J, Sobczak M, Jonuleit H, Thiede B, Schild H, Rajalingam K.

Cell Death Differ. 2019 Sep 20. doi: 10.1038/s41418-019-0416-4. [Epub ahead of print]


Proteomic and histopathological characterisation of sicca subjects and primary Sjögren's syndrome patients reveals promising tear, saliva and extracellular vesicle disease biomarkers.

Aqrawi LA, Galtung HK, Guerreiro EM, Øvstebø R, Thiede B, Utheim TP, Chen X, Utheim ØA, Palm Ø, Skarstein K, Jensen JL.

Arthritis Res Ther. 2019 Jul 31;21(1):181. doi: 10.1186/s13075-019-1961-4.


Correction: Ezrin-anchored PKA phosphorylates serine 369 and 373 on connexin 43 to enhance gap junction assembly, communication, and cell fusion.

Dukic AR, Gerbaud P, Guibourdenche J, Thiede B, Taskén K, Pidoux G.

Biochem J. 2019 Jul 2;476(13):1927. doi: 10.1042/BCJ-2017-0529_COR. No abstract available.


High OGT activity is essential for MYC-driven proliferation of prostate cancer cells.

Itkonen HM, Urbanucci A, Martin SE, Khan A, Mathelier A, Thiede B, Walker S, Mills IG.

Theranostics. 2019 Apr 12;9(8):2183-2197. doi: 10.7150/thno.30834. eCollection 2019.


NIPSNAP1 and NIPSNAP2 Act as "Eat Me" Signals for Mitophagy.

Princely Abudu Y, Pankiv S, Mathai BJ, Håkon Lystad A, Bindesbøll C, Brenne HB, Yoke Wui Ng M, Thiede B, Yamamoto A, Mutugi Nthiga T, Lamark T, Esguerra CV, Johansen T, Simonsen A.

Dev Cell. 2019 May 20;49(4):509-525.e12. doi: 10.1016/j.devcel.2019.03.013. Epub 2019 Apr 11.


Ultracentrifugation versus kit exosome isolation: nanoLC-MS and other tools reveal similar performance biomarkers, but also contaminations.

Skottvoll FS, Berg HE, Bjørseth K, Lund K, Roos N, Bekhradnia S, Thiede B, Sandberg C, Vik-Mo EO, Roberg-Larsen H, Nyström B, Lundanes E, Wilson SR.

Future Sci OA. 2018 Nov 9;5(1):FSO359. doi: 10.4155/fsoa-2018-0088. eCollection 2019 Jan.


Severity of clinical dry eye manifestations influences protein expression in tear fluid of patients with primary Sjögren's syndrome.

Aqrawi LA, Chen X, Jensen JL, Morthen MK, Thiede B, Utheim ØA, Palm Ø, Tashbayev B, Utheim TP, Galtung HK.

PLoS One. 2018 Oct 12;13(10):e0205762. doi: 10.1371/journal.pone.0205762. eCollection 2018.


Absolute two-point quantification of proteins using dimethylated proteotypic peptides.

Tran TT, Bollineni RC, Koehler CJ, Thiede B.

Analyst. 2018 Sep 21;143(18):4359-4365. doi: 10.1039/c8an01081a. Epub 2018 Aug 16.


Targeting prohibitins at the cell surface prevents Th17-mediated autoimmunity.

Buehler U, Schulenburg K, Yurugi H, Šolman M, Abankwa D, Ulges A, Tenzer S, Bopp T, Thiede B, Zipp F, Rajalingam K.

EMBO J. 2018 Aug 15;37(16). pii: e99429. doi: 10.15252/embj.201899429. Epub 2018 Jul 26.


Author Correction: Large-scale intact glycopeptide identification by Mascot database search.

Bollineni RC, Koehler CJ, Gislefoss RE, Anonsen JH, Thiede B.

Sci Rep. 2018 Jun 22;8(1):9771. doi: 10.1038/s41598-018-28147-w.


Improvement of Storage Medium for Cultured Human Retinal Pigment Epithelial Cells Using Factorial Design.

Pasovic L, Utheim TP, Reppe S, Khan AZ, Jackson CJ, Thiede B, Berg JP, Messelt EB, Eidet JR.

Sci Rep. 2018 Apr 9;8(1):5688. doi: 10.1038/s41598-018-24121-8.


Large-scale intact glycopeptide identification by Mascot database search.

Bollineni RC, Koehler CJ, Gislefoss RE, Anonsen JH, Thiede B.

Sci Rep. 2018 Feb 1;8(1):2117. doi: 10.1038/s41598-018-20331-2. Erratum in: Sci Rep. 2018 Jun 22;8(1):9771.


Ezrin-anchored PKA phosphorylates serine 369 and 373 on connexin 43 to enhance gap junction assembly, communication, and cell fusion.

Dukic AR, Gerbaud P, Guibourdenche J, Thiede B, Taskén K, Pidoux G.

Biochem J. 2018 Jan 31;475(2):455-476. doi: 10.1042/BCJ20170529. Erratum in: Biochem J. 2019 Jul 2;476(13):1927.


Factor VII deficiency: Unveiling the cellular and molecular mechanisms underlying three model alterations of the enzyme catalytic domain.

Chollet ME, Andersen E, Skarpen E, Myklebust CF, Koehler C, Morth JP, Chuansumrit A, Pinotti M, Bernardi F, Thiede B, Sandset PM, Skretting G.

Biochim Biophys Acta Mol Basis Dis. 2018 Mar;1864(3):660-667. doi: 10.1016/j.bbadis.2017.12.016. Epub 2017 Dec 12.


Heterogeneous Climate Effects on Human Migration in Indonesia.

Thiede BC, Gray CL.

Popul Environ. 2017 Dec;39(2):147-172. doi: 10.1007/s11111-016-0265-8. Epub 2016 Oct 20. No abstract available.


Marriage, Work, and Racial Inequalities in Poverty: Evidence from the U.S.

Thiede B, Kim H, Slack T.

J Marriage Fam. 2017 Oct;79(5):1241-1257. doi: 10.1111/jomf.12427. Epub 2017 Jul 11.


Phosphorylation Modulates Ameloblastin Self-assembly and Ca 2+ Binding.

Stakkestad Ø, Lyngstadaas SP, Thiede B, Vondrasek J, Skålhegg BS, Reseland JE.

Front Physiol. 2017 Jul 27;8:531. doi: 10.3389/fphys.2017.00531. eCollection 2017.


A Demographic Deficit? Local Population Aging and Access to Services in Rural America, 1990-2010.

Thiede B, Brown DL, Sanders SR, Glasgow N, Kulcsar LJ.

Rural Sociol. 2017 Mar;82(1):44-74. doi: 10.1111/ruso.12117. Epub 2016 Aug 2.


Identification of Alternative Splice Variants Using Unique Tryptic Peptide Sequences for Database Searches.

Tran TT, Bollineni RC, Strozynski M, Koehler CJ, Thiede B.

J Proteome Res. 2017 Jul 7;16(7):2571-2578. doi: 10.1021/acs.jproteome.7b00126. Epub 2017 May 25.


Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells.

Tran TT, Strozynski M, Thiede B.

Proteomics. 2017 Jun;17(11). doi: 10.1002/pmic.201600470.


Climate Variability and Inter-Provincial Migration in South America, 1970-2011.

Thiede B, Gray C, Mueller V.

Glob Environ Change. 2016 Nov;41:228-240. doi: 10.1016/j.gloenvcha.2016.10.005. Epub 2016 Nov 16.


c-Myc Antagonises the Transcriptional Activity of the Androgen Receptor in Prostate Cancer Affecting Key Gene Networks.

Barfeld SJ, Urbanucci A, Itkonen HM, Fazli L, Hicks JL, Thiede B, Rennie PS, Yegnasubramanian S, DeMarzo AM, Mills IG.

EBioMedicine. 2017 Apr;18:83-93. doi: 10.1016/j.ebiom.2017.04.006. Epub 2017 Apr 5.


AKAP95 interacts with nucleoporin TPR in mitosis and is important for the spindle assembly checkpoint.

López-Soop G, Rønningen T, Rogala A, Richartz N, Blomhoff HK, Thiede B, Collas P, Küntziger T.

Cell Cycle. 2017 May 19;16(10):947-956. doi: 10.1080/15384101.2017.1310350. Epub 2017 Apr 5.


Apoptosis inhibitor 5 is an endogenous inhibitor of caspase-2.

Imre G, Berthelet J, Heering J, Kehrloesser S, Melzer IM, Lee BI, Thiede B, Dötsch V, Rajalingam K.

EMBO Rep. 2017 May;18(5):733-744. doi: 10.15252/embr.201643744. Epub 2017 Mar 23.


Viral Protein Kinetics of Piscine Orthoreovirus Infection in Atlantic Salmon Blood Cells.

Haatveit HM, Wessel Ø, Markussen T, Lund M, Thiede B, Nyman IB, Braaen S, Dahle MK, Rimstad E.

Viruses. 2017 Mar 18;9(3). pii: E49. doi: 10.3390/v9030049.


Corrigendum: Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes.

Chymkowitch P, P AN, Aanes H, Koehler CJ, Thiede B, Lorenz S, Meza-Zepeda LA, Klungland A, Enserink JM.

Genome Res. 2017 Feb;27(2):334. doi: 10.1101/gr.218370.116. No abstract available.


Identification of potential saliva and tear biomarkers in primary Sjögren's syndrome, utilising the extraction of extracellular vesicles and proteomics analysis.

Aqrawi LA, Galtung HK, Vestad B, Øvstebø R, Thiede B, Rusthen S, Young A, Guerreiro EM, Utheim TP, Chen X, Utheim ØA, Palm Ø, Jensen JL.

Arthritis Res Ther. 2017 Jan 25;19(1):14. doi: 10.1186/s13075-017-1228-x.


Identification of kinases phosphorylating 13 sites in the nuclear, DNA-binding protein NUCKS.

Grundt K, Thiede B, Østvold AC.

Biochim Biophys Acta Proteins Proteom. 2017 Mar;1865(3):359-369. doi: 10.1016/j.bbapap.2016.12.009. Epub 2016 Dec 21.


Application of the half decimal place rule to increase the peptide identification rate.

Koehler CJ, Bollineni RC, Thiede B.

Rapid Commun Mass Spectrom. 2017 Jan 30;31(2):227-233. doi: 10.1002/rcm.7780.


CTCF modulates Estrogen Receptor function through specific chromatin and nuclear matrix interactions.

Fiorito E, Sharma Y, Gilfillan S, Wang S, Singh SK, Satheesh SV, Katika MR, Urbanucci A, Thiede B, Mills IG, Hurtado A.

Nucleic Acids Res. 2016 Dec 15;44(22):10588-10602. Epub 2016 Sep 15.


Data for the co-expression and purification of human recombinant CaMKK2 in complex with calmodulin in Escherichia coli.

Gerner L, Munack S, Temmerman K, Lawrence-Dörner AM, Besir H, Wilmanns M, Jensen JK, Thiede B, Mills IG, Morth JP.

Data Brief. 2016 Jun 29;8:733-40. doi: 10.1016/j.dib.2016.06.033. eCollection 2016 Sep.


Factors Associated With the Risk of Acute Malnutrition Among Children Aged 6 to 36 Months in Households Targeted by an Emergency Cash Transfer Program.

Bliss J, Jensen N, Thiede B, Shoham J, Dolan C, Sibson V, Fenn B.

Food Nutr Bull. 2016 Sep;37(3):387-400. doi: 10.1177/0379572116654772. Epub 2016 Jul 10.


Using the fluorescent properties of STO-609 as a tool to assist structure-function analyses of recombinant CaMKK2.

Gerner L, Munack S, Temmerman K, Lawrence-Dörner AM, Besir H, Wilmanns M, Jensen JK, Thiede B, Mills IG, Morth JP.

Biochem Biophys Res Commun. 2016 Jul 22;476(2):102-7. doi: 10.1016/j.bbrc.2016.05.045. Epub 2016 May 11.


Towards deciphering proteomes via the proteoform, protein speciation, moonlighting and protein code concepts.

Jungblut PR, Thiede B, Schlüter H.

J Proteomics. 2016 Feb 16;134:1-4. doi: 10.1016/j.jprot.2016.01.012. No abstract available.


Infectious Salmon Anaemia Virus (ISAV) RNA Binding Protein Encoded by Segment 8 ORF2 and Its Interaction with ISAV and Intracellular Proteins.

Olsen CM, Markussen T, Thiede B, Rimstad E.

Viruses. 2016 Feb 18;8(2). pii: E52. doi: 10.3390/v8020052.


The Great Recession and America's Geography of Unemployment.

Thiede BC, Monnat SM.

Demogr Res. 2016;35:891-928. doi: 10.4054/DemRes.2016.35.30. Epub 2016 Sep 27.


A differential protein solubility approach for the depletion of highly abundant proteins in plasma using ammonium sulfate.

Bollineni RC, Guldvik IJ, Grönberg H, Wiklund F, Mills IG, Thiede B.

Analyst. 2015 Dec 21;140(24):8109-17. doi: 10.1039/c5an01560j.


Hypoxia Strongly Affects Mitochondrial Ribosomal Proteins and Translocases, as Shown by Quantitative Proteomics of HeLa Cells.

Bousquet PA, Sandvik JA, Arntzen MØ, Jeppesen Edin NF, Christoffersen S, Krengel U, Pettersen EO, Thiede B.

Int J Proteomics. 2015;2015:678527. doi: 10.1155/2015/678527. Epub 2015 Sep 2.


The impact of carbon-13 and deuterium on relative quantification of proteins using stable isotope diethyl labeling.

Koehler CJ, Arntzen MØ, Thiede B.

Rapid Commun Mass Spectrom. 2015 May 15;29(9):830-6. doi: 10.1002/rcm.7170.


Consolidation of proteomics data in the Cancer Proteomics database.

Arntzen MØ, Boddie P, Frick R, Koehler CJ, Thiede B.

Proteomics. 2015 Nov;15(22):3765-71. doi: 10.1002/pmic.201500144. Epub 2015 Oct 26.


Identification of prostate cancer biomarkers in urinary exosomes.

Øverbye A, Skotland T, Koehler CJ, Thiede B, Seierstad T, Berge V, Sandvig K, Llorente A.

Oncotarget. 2015 Oct 6;6(30):30357-76. doi: 10.18632/oncotarget.4851.


Subfractions of enamel matrix derivative differentially influence cytokine secretion from human oral fibroblasts.

Villa O, Brookes SJ, Thiede B, Heijl L, Lyngstadaas SP, Reseland JE.

J Tissue Eng. 2015 Mar 19;6:2041731415575857. doi: 10.1177/2041731415575857. eCollection 2015.


Sumoylation of Rap1 mediates the recruitment of TFIID to promote transcription of ribosomal protein genes.

Chymkowitch P, Nguéa AP, Aanes H, Koehler CJ, Thiede B, Lorenz S, Meza-Zepeda LA, Klungland A, Enserink JM.

Genome Res. 2015 Jun;25(6):897-906. doi: 10.1101/gr.185793.114. Epub 2015 Mar 23. Erratum in: Genome Res. 2017 Feb;27(2):334.


Irisin - a myth rather than an exercise-inducible myokine.

Albrecht E, Norheim F, Thiede B, Holen T, Ohashi T, Schering L, Lee S, Brenmoehl J, Thomas S, Drevon CA, Erickson HP, Maak S.

Sci Rep. 2015 Mar 9;5:8889. doi: 10.1038/srep08889.


Metabolic reprogramming of metastatic breast cancer and melanoma by let-7a microRNA.

Serguienko A, Grad I, Wennerstrøm AB, Meza-Zepeda LA, Thiede B, Stratford EW, Myklebost O, Munthe E.

Oncotarget. 2015 Feb 10;6(4):2451-65.


Analysis of T4SS-induced signaling by H. pylori using quantitative phosphoproteomics.

Glowinski F, Holland C, Thiede B, Jungblut PR, Meyer TF.

Front Microbiol. 2014 Jul 18;5:356. doi: 10.3389/fmicb.2014.00356. eCollection 2014.


Molecular mechanisms of nutlin-3 involve acetylation of p53, histones and heat shock proteins in acute myeloid leukemia.

Haaland I, Opsahl JA, Berven FS, Reikvam H, Fredly HK, Haugse R, Thiede B, McCormack E, Lain S, Bruserud O, Gjertsen BT.

Mol Cancer. 2014 May 21;13:116. doi: 10.1186/1476-4598-13-116.


Retinoic acid signalling regulates the development of tonotopically patterned hair cells in the chicken cochlea.

Thiede BR, Mann ZF, Chang W, Ku YC, Son YK, Lovett M, Kelley MW, Corwin JT.

Nat Commun. 2014 May 20;5:3840. doi: 10.1038/ncomms4840.

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