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Rapid detection of Bacillus ionophore cereulide in food products.

Ducrest PJ, Pfammatter S, Stephan D, Vogel G, Thibault P, Schnyder B.

Sci Rep. 2019 Apr 9;9(1):5814. doi: 10.1038/s41598-019-42167-0.


Accurate Quantitative Proteomic Analyses Using Metabolic Labeling and High Field Asymmetric Waveform Ion Mobility Spectrometry (FAIMS).

Pfammatter S, Bonneil E, McManus FP, Thibault P.

J Proteome Res. 2019 May 3;18(5):2129-2138. doi: 10.1021/acs.jproteome.9b00021. Epub 2019 Apr 17.


Ptychographic X-ray computed tomography at a high-brilliance X-ray source.

Sala S, Batey DJ, Prakash A, Ahmed S, Rau C, Thibault P.

Opt Express. 2019 Jan 21;27(2):533-542. doi: 10.1364/OE.27.000533.


Noncoding regions are the main source of targetable tumor-specific antigens.

Laumont CM, Vincent K, Hesnard L, Audemard É, Bonneil É, Laverdure JP, Gendron P, Courcelles M, Hardy MP, Côté C, Durette C, St-Pierre C, Benhammadi M, Lanoix J, Vobecky S, Haddad E, Lemieux S, Thibault P, Perreault C.

Sci Transl Med. 2018 Dec 5;10(470). pii: eaau5516. doi: 10.1126/scitranslmed.aau5516.


Dynamic Phosphoproteomics Uncovers Signaling Pathways Modulated by Anti-oncogenic Sphingolipid Analogs.

Kubiniok P, Finicle BT, Piffaretti F, McCracken AN, Perryman M, Hanessian S, Edinger AL, Thibault P.

Mol Cell Proteomics. 2019 Mar;18(3):408-422. doi: 10.1074/mcp.RA118.001053. Epub 2018 Nov 27.


Neck vein obstruction: Diagnosis and the role of chronic persistent Chlamydophila pneumoniae infection.

Thibault PK.

Phlebology. 2018 Oct 25:268355518804379. doi: 10.1177/0268355518804379. [Epub ahead of print]


Monoubiquitination of ASXLs controls the deubiquitinase activity of the tumor suppressor BAP1.

Daou S, Barbour H, Ahmed O, Masclef L, Baril C, Sen Nkwe N, Tchelougou D, Uriarte M, Bonneil E, Ceccarelli D, Mashtalir N, Tanji M, Masson JY, Thibault P, Sicheri F, Yang H, Carbone M, Therrien M, Affar EB.

Nat Commun. 2018 Oct 22;9(1):4385. doi: 10.1038/s41467-018-06854-2.


Phospho-dependent recruitment of the yeast NuA4 acetyltransferase complex by MRX at DNA breaks regulates RPA dynamics during resection.

Cheng X, Jobin-Robitaille O, Billon P, Buisson R, Niu H, Lacoste N, Abshiru N, Côté V, Thibault P, Kron SJ, Sung P, Brandl CJ, Masson JY, Côté J.

Proc Natl Acad Sci U S A. 2018 Oct 2;115(40):10028-10033. doi: 10.1073/pnas.1806513115. Epub 2018 Sep 17.


Response to "Chronic cerebrospinal venous insufficiency, chlamydia and multiple sclerosis": CCSVI, Chlamydia pneumoniae and multiple sclerosis clarification.

Thibault P.

Phlebology. 2018 Dec;33(10):696-698. doi: 10.1177/0268355518800104. Epub 2018 Sep 14. No abstract available.


Combined Enrichment/Enzymatic Approach To Study Tightly Clustered Multisite Phosphorylation on Ser-Rich Domains.

Kanshin E, Pascariu M, Tyers M, D'Amours D, Thibault P.

J Proteome Res. 2018 Sep 7;17(9):3050-3060. doi: 10.1021/acs.jproteome.8b00205. Epub 2018 Aug 9.


A Novel Differential Ion Mobility Device Expands the Depth of Proteome Coverage and the Sensitivity of Multiplex Proteomic Measurements.

Pfammatter S, Bonneil E, McManus FP, Prasad S, Bailey DJ, Belford M, Dunyach JJ, Thibault P.

Mol Cell Proteomics. 2018 Oct;17(10):2051-2067. doi: 10.1074/mcp.TIR118.000862. Epub 2018 Jul 14.


Multiscale X-ray imaging using ptychography.

Sala S, Kuppili VSC, Chalkidis S, Batey DJ, Shi X, Rau C, Thibault P.

J Synchrotron Radiat. 2018 Jul 1;25(Pt 4):1214-1221. doi: 10.1107/S1600577518007221. Epub 2018 Jun 17.


Quantitative SUMO proteomics reveals the modulation of several PML nuclear body associated proteins and an anti-senescence function of UBC9.

McManus FP, Bourdeau V, Acevedo M, Lopes-Paciencia S, Mignacca L, Lamoliatte F, Rojas Pino JW, Ferbeyre G, Thibault P.

Sci Rep. 2018 May 17;8(1):7754. doi: 10.1038/s41598-018-25150-z.


Gas-Phase Enrichment of Multiply Charged Peptide Ions by Differential Ion Mobility Extend the Comprehensiveness of SUMO Proteome Analyses.

Pfammatter S, Bonneil E, McManus FP, Thibault P.

J Am Soc Mass Spectrom. 2018 Jun;29(6):1111-1124. doi: 10.1007/s13361-018-1917-y. Epub 2018 Apr 5.


Hypoxia leads to significant changes in alternative splicing and elevated expression of CLK splice factor kinases in PC3 prostate cancer cells.

Bowler E, Porazinski S, Uzor S, Thibault P, Durand M, Lapointe E, Rouschop KMA, Hancock J, Wilson I, Ladomery M.

BMC Cancer. 2018 Apr 2;18(1):355. doi: 10.1186/s12885-018-4227-7.


PTEN Deficiency and AMPK Activation Promote Nutrient Scavenging and Anabolism in Prostate Cancer Cells.

Kim SM, Nguyen TT, Ravi A, Kubiniok P, Finicle BT, Jayashankar V, Malacrida L, Hou J, Robertson J, Gao D, Chernoff J, Digman MA, Potma EO, Tromberg BJ, Thibault P, Edinger AL.

Cancer Discov. 2018 Jul;8(7):866-883. doi: 10.1158/2159-8290.CD-17-1215. Epub 2018 Mar 23.


Promyelocytic Leukemia Protein (PML) Requirement for Interferon-induced Global Cellular SUMOylation.

Maroui MA, Maarifi G, McManus FP, Lamoliatte F, Thibault P, Chelbi-Alix MK.

Mol Cell Proteomics. 2018 Jun;17(6):1196-1208. doi: 10.1074/mcp.RA117.000447. Epub 2018 Mar 13.


Comparison of the MHC I Immunopeptidome Repertoire of B-Cell Lymphoblasts Using Two Isolation Methods.

Lanoix J, Durette C, Courcelles M, Cossette É, Comtois-Marotte S, Hardy MP, Côté C, Perreault C, Thibault P.

Proteomics. 2018 Jun;18(12):e1700251. doi: 10.1002/pmic.201700251. Epub 2018 Apr 24.


At-wavelength optics characterisation via X-ray speckle- and grating-based unified modulated pattern analysis.

Zdora MC, Zanette I, Zhou T, Koch FJ, Romell J, Sala S, Last A, Ohishi Y, Hirao N, Rau C, Thibault P.

Opt Express. 2018 Feb 19;26(4):4989-5004. doi: 10.1364/OE.26.004989.


Clinimetric properties of the Nepali version of the Pain Catastrophizing Scale in individuals with chronic pain.

Sharma S, Thibault P, Abbott JH, Jensen MP.

J Pain Res. 2018 Jan 31;11:265-276. doi: 10.2147/JPR.S153061. eCollection 2018.


Acoustic streaming induced by two orthogonal ultrasound standing waves in a microfluidic channel.

Doinikov AA, Thibault P, Marmottant P.

Ultrasonics. 2018 Jul;87:7-19. doi: 10.1016/j.ultras.2018.02.002. Epub 2018 Feb 5.


hnRNP A1/A2 and Sam68 collaborate with SRSF10 to control the alternative splicing response to oxaliplatin-mediated DNA damage.

Cloutier A, Shkreta L, Toutant J, Durand M, Thibault P, Chabot B.

Sci Rep. 2018 Feb 2;8(1):2206. doi: 10.1038/s41598-018-20360-x.


Acoustic streaming in a microfluidic channel with a reflector: Case of a standing wave generated by two counterpropagating leaky surface waves.

Doinikov AA, Thibault P, Marmottant P.

Phys Rev E. 2017 Jul;96(1-1):013101. doi: 10.1103/PhysRevE.96.013101. Epub 2017 Jul 5.


Analysis of CTCL cell lines reveals important differences between mycosis fungoides/Sézary syndrome vs. HTLV-1+ leukemic cell lines.

Netchiporouk E, Gantchev J, Tsang M, Thibault P, Watters AK, Hughes JM, Ghazawi FM, Woetmann A, Ødum N, Sasseville D, Litvinov IV.

Oncotarget. 2017 Oct 7;8(56):95981-95998. doi: 10.18632/oncotarget.21619. eCollection 2017 Nov 10.


Identification of cross talk between SUMOylation and ubiquitylation using a sequential peptide immunopurification approach.

McManus FP, Lamoliatte F, Thibault P.

Nat Protoc. 2017 Nov;12(11):2342-2358. doi: 10.1038/nprot.2017.105. Epub 2017 Oct 19.


Extended Synaptotagmin 1 Interacts with Herpes Simplex Virus 1 Glycoprotein M and Negatively Modulates Virus-Induced Membrane Fusion.

El Kasmi I, Khadivjam B, Lackman M, Duron J, Bonneil E, Thibault P, Lippé R.

J Virol. 2017 Dec 14;92(1). pii: e01281-17. doi: 10.1128/JVI.01281-17. Print 2018 Jan 1.


Immunogenic stress and death of cancer cells: Contribution of antigenicity vs adjuvanticity to immunosurveillance.

Bloy N, Garcia P, Laumont CM, Pitt JM, Sistigu A, Stoll G, Yamazaki T, Bonneil E, Buqué A, Humeau J, Drijfhout JW, Meurice G, Walter S, Fritsche J, Weinschenk T, Rammensee HG, Melief C, Thibault P, Perreault C, Pol J, Zitvogel L, Senovilla L, Kroemer G.

Immunol Rev. 2017 Nov;280(1):165-174. doi: 10.1111/imr.12582. Review.


The SysteMHC Atlas project.

Shao W, Pedrioli PGA, Wolski W, Scurtescu C, Schmid E, Vizcaíno JA, Courcelles M, Schuster H, Kowalewski D, Marino F, Arlehamn CSL, Vaughan K, Peters B, Sette A, Ottenhoff THM, Meijgaarden KE, Nieuwenhuizen N, Kaufmann SHE, Schlapbach R, Castle JC, Nesvizhskii AI, Nielsen M, Deutsch EW, Campbell DS, Moritz RL, Zubarev RA, Ytterberg AJ, Purcell AW, Marcilla M, Paradela A, Wang Q, Costello CE, Ternette N, van Veelen PA, van Els CACM, Heck AJR, de Souza GA, Sollid LM, Admon A, Stevanovic S, Rammensee HG, Thibault P, Perreault C, Bassani-Sternberg M, Aebersold R, Caron E.

Nucleic Acids Res. 2018 Jan 4;46(D1):D1237-D1247. doi: 10.1093/nar/gkx664.


Cross-sectional and Prospective Correlates of Recovery Expectancies in the Rehabilitation of Whiplash Injury.

Elphinston RA, Thibault P, Carriere JS, Rainville P, Sullivan MJL.

Clin J Pain. 2018 Apr;34(4):306-312. doi: 10.1097/AJP.0000000000000542.


Splicing arrays reveal novel RBM10 targets, including SMN2 pre-mRNA.

Sutherland LC, Thibault P, Durand M, Lapointe E, Knee JM, Beauvais A, Kalatskaya I, Hunt SC, Loiselle JJ, Roy JG, Tessier SJ, Ybazeta G, Stein L, Kothary R, Klinck R, Chabot B.

BMC Mol Biol. 2017 Jul 20;18(1):19. doi: 10.1186/s12867-017-0096-x.


Empty Vein Technique: Can Perivenous Tumescent Compression Help?

Thibault PK, Parsi K.

Eur J Vasc Endovasc Surg. 2017 Sep;54(3):369. doi: 10.1016/j.ejvs.2017.06.007. Epub 2017 Jul 14. No abstract available.


Presence of diabetes autoantigens in extracellular vesicles derived from human islets.

Hasilo CP, Negi S, Allaeys I, Cloutier N, Rutman AK, Gasparrini M, Bonneil É, Thibault P, Boilard É, Paraskevas S.

Sci Rep. 2017 Jul 10;7(1):5000. doi: 10.1038/s41598-017-04977-y.


Gene expression analysis in Cutaneous T-Cell Lymphomas (CTCL) highlights disease heterogeneity and potential diagnostic and prognostic indicators.

Litvinov IV, Tetzlaff MT, Thibault P, Gangar P, Moreau L, Watters AK, Netchiporouk E, Pehr K, Prieto VG, Rahme E, Provost N, Gilbert M, Sasseville D, Duvic M.

Oncoimmunology. 2017 Mar 17;6(5):e1306618. doi: 10.1080/2162402X.2017.1306618. eCollection 2017.


Controlled rotation and translation of spherical particles or living cells by surface acoustic waves.

Bernard I, Doinikov AA, Marmottant P, Rabaud D, Poulain C, Thibault P.

Lab Chip. 2017 Jul 11;17(14):2470-2480. doi: 10.1039/c7lc00084g.


A prolonged antibiotic protocol to treat persistent Chlamydophila pneumoniae infection improves the extracranial venous circulation in multiple sclerosis.

Thibault P, Attia J, Oldmeadow C.

Phlebology. 2018 Jul;33(6):397-406. doi: 10.1177/0268355517712884. Epub 2017 Jun 5.


X-ray Phase-Contrast Imaging and Metrology through Unified Modulated Pattern Analysis.

Zdora MC, Thibault P, Zhou T, Koch FJ, Romell J, Sala S, Last A, Rau C, Zanette I.

Phys Rev Lett. 2017 May 19;118(20):203903. doi: 10.1103/PhysRevLett.118.203903. Epub 2017 May 18.


CLMSVault: A Software Suite for Protein Cross-Linking Mass-Spectrometry Data Analysis and Visualization.

Courcelles M, Coulombe-Huntington J, Cossette É, Gingras AC, Thibault P, Tyers M.

J Proteome Res. 2017 Jul 7;16(7):2645-2652. doi: 10.1021/acs.jproteome.7b00205. Epub 2017 Jun 5.


Transcriptome-wide analysis of alternative RNA splicing events in Epstein-Barr virus-associated gastric carcinomas.

Armero VES, Tremblay MP, Allaire A, Boudreault S, Martenon-Brodeur C, Duval C, Durand M, Lapointe E, Thibault P, Tremblay-Létourneau M, Perreault JP, Scott MS, Bisaillon M.

PLoS One. 2017 May 11;12(5):e0176880. doi: 10.1371/journal.pone.0176880. eCollection 2017.


Expectancies mediate the relationship between perceived injustice and return to work following whiplash injury: A 1-year prospective study.

Carriere JS, Thibault P, Adams H, Milioto M, Ditto B, Sullivan MJL.

Eur J Pain. 2017 Aug;21(7):1234-1242. doi: 10.1002/ejp.1023. Epub 2017 May 11.


Zoonotic Potential of Emerging Paramyxoviruses: Knowns and Unknowns.

Thibault PA, Watkinson RE, Moreira-Soto A, Drexler JF, Lee B.

Adv Virus Res. 2017;98:1-55. doi: 10.1016/bs.aivir.2016.12.001. Epub 2017 Feb 2. Review.


X-ray phase microtomography with a single grating for high-throughput investigations of biological tissue.

Zdora MC, Vila-Comamala J, Schulz G, Khimchenko A, Hipp A, Cook AC, Dilg D, David C, Grünzweig C, Rau C, Thibault P, Zanette I.

Biomed Opt Express. 2017 Jan 31;8(2):1257-1270. doi: 10.1364/BOE.8.001257. eCollection 2017 Feb 1.


Machine Learning of Global Phosphoproteomic Profiles Enables Discrimination of Direct versus Indirect Kinase Substrates.

Kanshin E, Giguère S, Jing C, Tyers M, Thibault P.

Mol Cell Proteomics. 2017 May;16(5):786-798. doi: 10.1074/mcp.M116.066233. Epub 2017 Mar 6.


Acoustic streaming generated by two orthogonal standing waves propagating between two rigid walls.

Doinikov AA, Thibault P, Marmottant P.

J Acoust Soc Am. 2017 Feb;141(2):1282. doi: 10.1121/1.4976088.


Time-resolved Phosphoproteome Analysis of Paradoxical RAF Activation Reveals Novel Targets of ERK.

Kubiniok P, Lavoie H, Therrien M, Thibault P.

Mol Cell Proteomics. 2017 Apr;16(4):663-679. doi: 10.1074/mcp.M116.065128. Epub 2017 Feb 10.


Return to work helps maintain treatment gains in the rehabilitation of whiplash injury.

Sullivan M, Adams H, Thibault P, Moore E, Carriere JS, Larivière C.

Pain. 2017 May;158(5):980-987. doi: 10.1097/j.pain.0000000000000871.


A computational framework for ptychographic reconstructions.

Enders B, Thibault P.

Proc Math Phys Eng Sci. 2016 Dec;472(2196):20160640. doi: 10.1098/rspa.2016.0640.


Uncovering the SUMOylation and ubiquitylation crosstalk in human cells using sequential peptide immunopurification.

Lamoliatte F, McManus FP, Maarifi G, Chelbi-Alix MK, Thibault P.

Nat Commun. 2017 Jan 18;8:14109. doi: 10.1038/ncomms14109.


Corrigendum to "Introduction to the HUPO 2015 Special Issue" [J. Proteomics (2016) 1-2].

Borchers CH, Thibault P.

J Proteomics. 2017 Jan 30;152:355-356. doi: 10.1016/j.jprot.2016.12.005. No abstract available.


Assessing catastrophic thinking associated with debilitating mental health conditions.

Moore E, Adams H, Ellis T, Thibault P, Sullivan MJL.

Disabil Rehabil. 2018 Feb;40(3):317-322. doi: 10.1080/09638288.2016.1254283. Epub 2016 Nov 20.


MHC class I-associated peptides derive from selective regions of the human genome.

Pearson H, Daouda T, Granados DP, Durette C, Bonneil E, Courcelles M, Rodenbrock A, Laverdure JP, Côté C, Mader S, Lemieux S, Thibault P, Perreault C.

J Clin Invest. 2016 Dec 1;126(12):4690-4701. doi: 10.1172/JCI88590. Epub 2016 Nov 14.

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