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Items: 1 to 50 of 237

1.

Xylose fermentation efficiency of industrial Saccharomyces cerevisiae yeast with separate or combined xylose reductase/xylitol dehydrogenase and xylose isomerase pathways.

Cunha JT, Soares PO, Romaní A, Thevelein JM, Domingues L.

Biotechnol Biofuels. 2019 Jan 28;12:20. doi: 10.1186/s13068-019-1360-8. eCollection 2019.

2.

The molecular biology of fruity and floral aromas in beer and other alcoholic beverages.

Holt S, Miks MH, de Carvalho BT, Foulquié-Moreno MR, Thevelein JM.

FEMS Microbiol Rev. 2019 May 1;43(3):193-222. doi: 10.1093/femsre/fuy041.

3.

Polygenic Analysis in Absence of Major Effector ATF1 Unveils Novel Components in Yeast Flavor Ester Biosynthesis.

Holt S, Trindade de Carvalho B, Foulquié-Moreno MR, Thevelein JM.

MBio. 2018 Aug 28;9(4). pii: e01279-18. doi: 10.1128/mBio.01279-18.

4.

Extracellular maltotriose hydrolysis by Saccharomyces cerevisiae cells lacking the AGT1 permease.

Alves SL Jr, Thevelein JM, Stambuk BU.

Lett Appl Microbiol. 2018 Oct;67(4):377-383. doi: 10.1111/lam.13048. Epub 2018 Aug 22.

PMID:
29992585
5.
6.

Bioflavoring by non-conventional yeasts in sequential beer fermentations.

Holt S, Mukherjee V, Lievens B, Verstrepen KJ, Thevelein JM.

Food Microbiol. 2018 Jun;72:55-66. doi: 10.1016/j.fm.2017.11.008. Epub 2017 Nov 16.

7.

Guidelines and recommendations on yeast cell death nomenclature.

Carmona-Gutierrez D, Bauer MA, Zimmermann A, Aguilera A, Austriaco N, Ayscough K, Balzan R, Bar-Nun S, Barrientos A, Belenky P, Blondel M, Braun RJ, Breitenbach M, Burhans WC, Büttner S, Cavalieri D, Chang M, Cooper KF, Côrte-Real M, Costa V, Cullin C, Dawes I, Dengjel J, Dickman MB, Eisenberg T, Fahrenkrog B, Fasel N, Fröhlich KU, Gargouri A, Giannattasio S, Goffrini P, Gourlay CW, Grant CM, Greenwood MT, Guaragnella N, Heger T, Heinisch J, Herker E, Herrmann JM, Hofer S, Jiménez-Ruiz A, Jungwirth H, Kainz K, Kontoyiannis DP, Ludovico P, Manon S, Martegani E, Mazzoni C, Megeney LA, Meisinger C, Nielsen J, Nyström T, Osiewacz HD, Outeiro TF, Park HO, Pendl T, Petranovic D, Picot S, Polčic P, Powers T, Ramsdale M, Rinnerthaler M, Rockenfeller P, Ruckenstuhl C, Schaffrath R, Segovia M, Severin FF, Sharon A, Sigrist SJ, Sommer-Ruck C, Sousa MJ, Thevelein JM, Thevissen K, Titorenko V, Toledano MB, Tuite M, Vögtle FN, Westermann B, Winderickx J, Wissing S, Wölfl S, Zhang ZJ, Zhao RY, Zhou B, Galluzzi L, Kroemer G, Madeo F.

Microb Cell. 2018 Jan 1;5(1):4-31. doi: 10.15698/mic2018.01.607. Review.

8.

Identification of Novel Alleles Conferring Superior Production of Rose Flavor Phenylethyl Acetate Using Polygenic Analysis in Yeast.

Trindade de Carvalho B, Holt S, Souffriau B, Lopes Brandão R, Foulquié-Moreno MR, Thevelein JM.

MBio. 2017 Nov 7;8(6). pii: e01173-17. doi: 10.1128/mBio.01173-17.

9.

Fructose-1,6-bisphosphate couples glycolytic flux to activation of Ras.

Peeters K, Van Leemputte F, Fischer B, Bonini BM, Quezada H, Tsytlonok M, Haesen D, Vanthienen W, Bernardes N, Gonzalez-Blas CB, Janssens V, Tompa P, Versées W, Thevelein JM.

Nat Commun. 2017 Oct 13;8(1):922. doi: 10.1038/s41467-017-01019-z.

10.

Phenotypic landscape of non-conventional yeast species for different stress tolerance traits desirable in bioethanol fermentation.

Mukherjee V, Radecka D, Aerts G, Verstrepen KJ, Lievens B, Thevelein JM.

Biotechnol Biofuels. 2017 Sep 13;10:216. doi: 10.1186/s13068-017-0899-5. eCollection 2017.

11.

Strain Breeding Enhanced Heterologous Cellobiohydrolase Secretion by Saccharomyces cerevisiae in a Protein Specific Manner.

Kroukamp H, den Haan R, la Grange DC, Sibanda N, Foulquié-Moreno MR, Thevelein JM, van Zyl WH.

Biotechnol J. 2017 Oct;12(10). doi: 10.1002/biot.201700346. Epub 2017 Sep 15.

PMID:
28834329
12.

Comparison of genome engineering using the CRISPR-Cas9 system in C. glabrata wild-type and lig4 strains.

Cen Y, Timmermans B, Souffriau B, Thevelein JM, Van Dijck P.

Fungal Genet Biol. 2017 Oct;107:44-50. doi: 10.1016/j.fgb.2017.08.004. Epub 2017 Aug 16.

PMID:
28822858
13.

The nutrient transceptor/PKA pathway functions independently of TOR and responds to leucine and Gcn2 in a TOR-independent manner.

Conrad M, Kankipati HN, Kimpe M, Van Zeebroeck G, Zhang Z, Thevelein JM.

FEMS Yeast Res. 2017 Aug 1;17(5). doi: 10.1093/femsyr/fox048.

14.

Fed-batch production of green coconut hydrolysates for high-gravity second-generation bioethanol fermentation with cellulosic yeast.

Soares J, Demeke MM, Van de Velde M, Foulquié-Moreno MR, Kerstens D, Sels BF, Verplaetse A, Fernandes AAR, Thevelein JM, Fernandes PMB.

Bioresour Technol. 2017 Nov;244(Pt 1):234-242. doi: 10.1016/j.biortech.2017.07.140. Epub 2017 Jul 27.

PMID:
28779676
15.

Engineering tolerance to industrially relevant stress factors in yeast cell factories.

Deparis Q, Claes A, Foulquié-Moreno MR, Thevelein JM.

FEMS Yeast Res. 2017 Jun 1;17(4). doi: 10.1093/femsyr/fox036. Review.

16.

On-line identification of fermentation processes for ethanol production.

Câmara MM, Soares RM, Feital T, Naomi P, Oki S, Thevelein JM, Amaral M, Pinto JC.

Bioprocess Biosyst Eng. 2017 Jul;40(7):989-1006. doi: 10.1007/s00449-017-1762-6. Epub 2017 Apr 8.

PMID:
28391378
17.

Identification of Ftr1 and Zrt1 as iron and zinc micronutrient transceptors for activation of the PKA pathway in Saccharomyces cerevisiae.

Schothorst J, Zeebroeck GV, Thevelein JM.

Microb Cell. 2017 Mar 2;4(3):74-89. doi: 10.15698/mic2017.03.561.

18.

Genomic saturation mutagenesis and polygenic analysis identify novel yeast genes affecting ethyl acetate production, a non-selectable polygenic trait.

Abt TD, Souffriau B, Foulquié-Moreno MR, Duitama J, Thevelein JM.

Microb Cell. 2016 Mar 18;3(4):159-175. doi: 10.15698/mic2016.04.491.

19.

Major sulfonate transporter Soa1 in Saccharomyces cerevisiae and considerable substrate diversity in its fungal family.

Holt S, Kankipati H, De Graeve S, Van Zeebroeck G, Foulquié-Moreno MR, Lindgreen S, Thevelein JM.

Nat Commun. 2017 Feb 6;8:14247. doi: 10.1038/ncomms14247.

20.

Glycerol metabolism and transport in yeast and fungi: established knowledge and ambiguities.

Klein M, Swinnen S, Thevelein JM, Nevoigt E.

Environ Microbiol. 2017 Mar;19(3):878-893. doi: 10.1111/1462-2920.13617. Epub 2017 Jan 30. Review.

PMID:
27878932
21.

Green coconut mesocarp pretreated by an alkaline process as raw material for bioethanol production.

Soares J, Demeke MM, Foulquié-Moreno MR, Van de Velde M, Verplaetse A, Fernandes AA, Thevelein JM, Fernandes PM.

Bioresour Technol. 2016 Sep;216:744-53. doi: 10.1016/j.biortech.2016.05.105. Epub 2016 May 31.

22.

Polygenic analysis and targeted improvement of the complex trait of high acetic acid tolerance in the yeast Saccharomyces cerevisiae.

Meijnen JP, Randazzo P, Foulquié-Moreno MR, van den Brink J, Vandecruys P, Stojiljkovic M, Dumortier F, Zalar P, Boekhout T, Gunde-Cimerman N, Kokošar J, Štajdohar M, Curk T, Petrovič U, Thevelein JM.

Biotechnol Biofuels. 2016 Jan 6;9:5. doi: 10.1186/s13068-015-0421-x. eCollection 2016.

23.

Looking beyond Saccharomyces: the potential of non-conventional yeast species for desirable traits in bioethanol fermentation.

Radecka D, Mukherjee V, Mateo RQ, Stojiljkovic M, Foulquié-Moreno MR, Thevelein JM.

FEMS Yeast Res. 2015 Sep;15(6). pii: fov053. doi: 10.1093/femsyr/fov053. Epub 2015 Jun 29. Review.

PMID:
26126524
24.

Auxotrophic Mutations Reduce Tolerance of Saccharomyces cerevisiae to Very High Levels of Ethanol Stress.

Swinnen S, Goovaerts A, Schaerlaekens K, Dumortier F, Verdyck P, Souvereyns K, Van Zeebroeck G, Foulquié-Moreno MR, Thevelein JM.

Eukaryot Cell. 2015 Sep;14(9):884-97. doi: 10.1128/EC.00053-15. Epub 2015 Jun 26.

25.

Chaotropicity: a key factor in product tolerance of biofuel-producing microorganisms.

Cray JA, Stevenson A, Ball P, Bankar SB, Eleutherio EC, Ezeji TC, Singhal RS, Thevelein JM, Timson DJ, Hallsworth JE.

Curr Opin Biotechnol. 2015 Jun;33:228-59. doi: 10.1016/j.copbio.2015.02.010. Epub 2015 Apr 2. Review.

PMID:
25841213
26.

Rapid evolution of recombinant Saccharomyces cerevisiae for Xylose fermentation through formation of extra-chromosomal circular DNA.

Demeke MM, Foulquié-Moreno MR, Dumortier F, Thevelein JM.

PLoS Genet. 2015 Mar 4;11(3):e1005010. doi: 10.1371/journal.pgen.1005010. eCollection 2015 Mar.

27.

Sul1 and Sul2 sulfate transceptors signal to protein kinase A upon exit of sulfur starvation.

Kankipati HN, Rubio-Texeira M, Castermans D, Diallinas G, Thevelein JM.

J Biol Chem. 2015 Apr 17;290(16):10430-46. doi: 10.1074/jbc.M114.629022. Epub 2015 Feb 27.

28.

Unraveling the triterpenoid saponin biosynthesis of the African shrub Maesa lanceolata.

Moses T, Pollier J, Faizal A, Apers S, Pieters L, Thevelein JM, Geelen D, Goossens A.

Mol Plant. 2015 Jan;8(1):122-35. doi: 10.1016/j.molp.2014.11.004. Epub 2014 Dec 11.

29.

OSC2 and CYP716A14v2 catalyze the biosynthesis of triterpenoids for the cuticle of aerial organs of Artemisia annua.

Moses T, Pollier J, Shen Q, Soetaert S, Reed J, Erffelinck ML, Van Nieuwerburgh FC, Vanden Bossche R, Osbourn A, Thevelein JM, Deforce D, Tang K, Goossens A.

Plant Cell. 2015 Jan;27(1):286-301. doi: 10.1105/tpc.114.134486. Epub 2015 Jan 9.

30.

Comparative analysis of CYP93E proteins for improved microbial synthesis of plant triterpenoids.

Moses T, Thevelein JM, Goossens A, Pollier J.

Phytochemistry. 2014 Dec;108:47-56. doi: 10.1016/j.phytochem.2014.10.002. Epub 2014 Oct 23.

PMID:
25453910
31.

Assessing the potential of wild yeasts for bioethanol production.

Ruyters S, Mukherjee V, Verstrepen KJ, Thevelein JM, Willems KA, Lievens B.

J Ind Microbiol Biotechnol. 2015 Jan;42(1):39-48. doi: 10.1007/s10295-014-1544-y. Epub 2014 Nov 21.

PMID:
25413210
32.

Unravelling the Triterpenoid Saponin Biosynthesis of the African Shrub Maesa lanceolata.

Moses T, Pollier J, Faizal A, Apers S, Pieters L, Thevelein JM, Geelen D, Goossens A.

Mol Plant. 2014 Oct 8. pii: ssu110. [Epub ahead of print]

PMID:
25296856
33.

Phenotypic evaluation of natural and industrial Saccharomyces yeasts for different traits desirable in industrial bioethanol production.

Mukherjee V, Steensels J, Lievens B, Van de Voorde I, Verplaetse A, Aerts G, Willems KA, Thevelein JM, Verstrepen KJ, Ruyters S.

Appl Microbiol Biotechnol. 2014 Nov;98(22):9483-98. doi: 10.1007/s00253-014-6090-z. Epub 2014 Sep 30.

PMID:
25267160
34.

Re-assessment of YAP1 and MCR1 contributions to inhibitor tolerance in robust engineered Saccharomyces cerevisiae fermenting undetoxified lignocellulosic hydrolysate.

Wallace-Salinas V, Signori L, Li YY, Ask M, Bettiga M, Porro D, Thevelein JM, Branduardi P, Foulquié-Moreno MR, Gorwa-Grauslund M.

AMB Express. 2014 Jul 22;4:56. doi: 10.1186/s13568-014-0056-5. eCollection 2014.

35.

Specific analogues uncouple transport, signalling, oligo-ubiquitination and endocytosis in the yeast Gap1 amino acid transceptor.

Van Zeebroeck G, Rubio-Texeira M, Schothorst J, Thevelein JM.

Mol Microbiol. 2014 Jul;93(2):213-33. doi: 10.1111/mmi.12654. Epub 2014 Jun 10.

36.

QTL mapping by pooled-segregant whole-genome sequencing in yeast.

Pais TM, Foulquié-Moreno MR, Thevelein JM.

Methods Mol Biol. 2014;1152:251-66. doi: 10.1007/978-1-4939-0563-8_15.

PMID:
24744038
37.

Natural and modified promoters for tailored metabolic engineering of the yeast Saccharomyces cerevisiae.

Hubmann G, Thevelein JM, Nevoigt E.

Methods Mol Biol. 2014;1152:17-42. doi: 10.1007/978-1-4939-0563-8_2. Review.

PMID:
24744025
38.

Improved linkage analysis of Quantitative Trait Loci using bulk segregants unveils a novel determinant of high ethanol tolerance in yeast.

Duitama J, Sánchez-Rodríguez A, Goovaerts A, Pulido-Tamayo S, Hubmann G, Foulquié-Moreno MR, Thevelein JM, Verstrepen KJ, Marchal K.

BMC Genomics. 2014 Mar 19;15:207. doi: 10.1186/1471-2164-15-207.

39.

Nutrient sensing and signaling in the yeast Saccharomyces cerevisiae.

Conrad M, Schothorst J, Kankipati HN, Van Zeebroeck G, Rubio-Texeira M, Thevelein JM.

FEMS Microbiol Rev. 2014 Mar;38(2):254-99. doi: 10.1111/1574-6976.12065. Epub 2014 Mar 3. Review.

40.

Combinatorial biosynthesis of sapogenins and saponins in Saccharomyces cerevisiae using a C-16α hydroxylase from Bupleurum falcatum.

Moses T, Pollier J, Almagro L, Buyst D, Van Montagu M, Pedreño MA, Martins JC, Thevelein JM, Goossens A.

Proc Natl Acad Sci U S A. 2014 Jan 28;111(4):1634-9. doi: 10.1073/pnas.1323369111. Epub 2014 Jan 13.

41.

An integrated framework for discovery and genotyping of genomic variants from high-throughput sequencing experiments.

Duitama J, Quintero JC, Cruz DF, Quintero C, Hubmann G, Foulquié-Moreno MR, Verstrepen KJ, Thevelein JM, Tohme J.

Nucleic Acids Res. 2014 Apr;42(6):e44. doi: 10.1093/nar/gkt1381. Epub 2014 Jan 11.

42.

The protein quality control system manages plant defence compound synthesis.

Pollier J, Moses T, González-Guzmán M, De Geyter N, Lippens S, Vanden Bossche R, Marhavý P, Kremer A, Morreel K, Guérin CJ, Tava A, Oleszek W, Thevelein JM, Campos N, Goormachtig S, Goossens A.

Nature. 2013 Dec 5;504(7478):148-52. doi: 10.1038/nature12685. Epub 2013 Nov 10.

PMID:
24213631
43.

Yeast nutrient transceptors provide novel insight in the functionality of membrane transporters.

Schothorst J, Kankipati HN, Conrad M, Samyn DR, Van Zeebroeck G, Popova Y, Rubio-Texeira M, Persson BL, Thevelein JM.

Curr Genet. 2013 Nov;59(4):197-206. doi: 10.1007/s00294-013-0413-y. Epub 2013 Oct 11.

44.

Combining inhibitor tolerance and D-xylose fermentation in industrial Saccharomyces cerevisiae for efficient lignocellulose-based bioethanol production.

Demeke MM, Dumortier F, Li Y, Broeckx T, Foulquié-Moreno MR, Thevelein JM.

Biotechnol Biofuels. 2013 Aug 26;6(1):120. doi: 10.1186/1754-6834-6-120.

45.

QTL analysis of high thermotolerance with superior and downgraded parental yeast strains reveals new minor QTLs and converges on novel causative alleles involved in RNA processing.

Yang Y, Foulquié-Moreno MR, Clement L, Erdei E, Tanghe A, Schaerlaekens K, Dumortier F, Thevelein JM.

PLoS Genet. 2013;9(8):e1003693. doi: 10.1371/journal.pgen.1003693. Epub 2013 Aug 15.

46.

Mammalian ribosomal and chaperone protein RPS3A counteracts α-synuclein aggregation and toxicity in a yeast model system.

De Graeve S, Marinelli S, Stolz F, Hendrix J, Vandamme J, Engelborghs Y, Van Dijck P, Thevelein JM.

Biochem J. 2013 Nov 1;455(3):295-306. doi: 10.1042/BJ20130417.

47.

Development of a D-xylose fermenting and inhibitor tolerant industrial Saccharomyces cerevisiae strain with high performance in lignocellulose hydrolysates using metabolic and evolutionary engineering.

Demeke MM, Dietz H, Li Y, Foulquié-Moreno MR, Mutturi S, Deprez S, Den Abt T, Bonini BM, Liden G, Dumortier F, Verplaetse A, Boles E, Thevelein JM.

Biotechnol Biofuels. 2013 Jun 21;6(1):89. doi: 10.1186/1754-6834-6-89.

48.

Identification of multiple interacting alleles conferring low glycerol and high ethanol yield in Saccharomyces cerevisiae ethanolic fermentation.

Hubmann G, Mathé L, Foulquié-Moreno MR, Duitama J, Nevoigt E, Thevelein JM.

Biotechnol Biofuels. 2013 Jun 11;6(1):87. doi: 10.1186/1754-6834-6-87.

49.

Agp2, a member of the yeast amino acid permease family, positively regulates polyamine transport at the transcriptional level.

Aouida M, Rubio-Texeira M, Thevelein JM, Poulin R, Ramotar D.

PLoS One. 2013 Jun 3;8(6):e65717. doi: 10.1371/journal.pone.0065717. Print 2013. Erratum in: PLoS One. 2013;8(7). doi:10.1371/annotation/ff0ad3b6-fff4-4783-8c2e-968a95283ab8. Rubio Texeira, Marta [corrected to Rubio-Texeira, Marta].

50.

Comparative polygenic analysis of maximal ethanol accumulation capacity and tolerance to high ethanol levels of cell proliferation in yeast.

Pais TM, Foulquié-Moreno MR, Hubmann G, Duitama J, Swinnen S, Goovaerts A, Yang Y, Dumortier F, Thevelein JM.

PLoS Genet. 2013 Jun;9(6):e1003548. doi: 10.1371/journal.pgen.1003548. Epub 2013 Jun 6.

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