Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 10

1.

Interoperable and scalable data analysis with microservices: Applications in Metabolomics.

Emami Khoonsari P, Moreno P, Bergmann S, Burman J, Capuccini M, Carone M, Cascante M, de Atauri P, Foguet C, Gonzalez-Beltran A, Hankemeier T, Haug K, He S, Herman S, Johnson D, Kale N, Larsson A, Neumann S, Peters K, Pireddu L, Rocca-Serra P, Roger P, Rueedi R, Ruttkies C, Sadawi N, Salek RM, Sansone SA, Schober D, Selivanov V, Thévenot EA, van Vliet M, Zanetti G, Steinbeck C, Kultima K, Spjuth O.

Bioinformatics. 2019 Mar 9. pii: btz160. doi: 10.1093/bioinformatics/btz160. [Epub ahead of print]

PMID:
30851093
2.

PhenoMeNal: processing and analysis of metabolomics data in the cloud.

Peters K, Bradbury J, Bergmann S, Capuccini M, Cascante M, de Atauri P, Ebbels TMD, Foguet C, Glen R, Gonzalez-Beltran A, Günther UL, Handakas E, Hankemeier T, Haug K, Herman S, Holub P, Izzo M, Jacob D, Johnson D, Jourdan F, Kale N, Karaman I, Khalili B, Emami Khonsari P, Kultima K, Lampa S, Larsson A, Ludwig C, Moreno P, Neumann S, Novella JA, O'Donovan C, Pearce JTM, Peluso A, Piras ME, Pireddu L, Reed MAC, Rocca-Serra P, Roger P, Rosato A, Rueedi R, Ruttkies C, Sadawi N, Salek RM, Sansone SA, Selivanov V, Spjuth O, Schober D, Thévenot EA, Tomasoni M, van Rijswijk M, van Vliet M, Viant MR, Weber RJM, Zanetti G, Steinbeck C.

Gigascience. 2019 Feb 1;8(2). pii: giy149. doi: 10.1093/gigascience/giy149.

3.

Metabolomics fingerprint of coffee species determined by untargeted-profiling study using LC-HRMS.

Souard F, Delporte C, Stoffelen P, Thévenot EA, Noret N, Dauvergne B, Kauffmann JM, Van Antwerpen P, Stévigny C.

Food Chem. 2018 Apr 15;245:603-612. doi: 10.1016/j.foodchem.2017.10.022. Epub 2017 Oct 12.

PMID:
29287415
4.

The future of metabolomics in ELIXIR.

van Rijswijk M, Beirnaert C, Caron C, Cascante M, Dominguez V, Dunn WB, Ebbels TMD, Giacomoni F, Gonzalez-Beltran A, Hankemeier T, Haug K, Izquierdo-Garcia JL, Jimenez RC, Jourdan F, Kale N, Klapa MI, Kohlbacher O, Koort K, Kultima K, Le Corguillé G, Moreno P, Moschonas NK, Neumann S, O'Donovan C, Reczko M, Rocca-Serra P, Rosato A, Salek RM, Sansone SA, Satagopam V, Schober D, Shimmo R, Spicer RA, Spjuth O, Thévenot EA, Viant MR, Weber RJM, Willighagen EL, Zanetti G, Steinbeck C.

Version 2. F1000Res. 2017 Sep 6 [revised 2017 Jan 1];6. pii: ELIXIR-1649. doi: 10.12688/f1000research.12342.2. eCollection 2017.

5.

proFIA: a data preprocessing workflow for flow injection analysis coupled to high-resolution mass spectrometry.

Delabrière A, Hohenester UM, Colsch B, Junot C, Fenaille F, Thévenot EA.

Bioinformatics. 2017 Dec 1;33(23):3767-3775. doi: 10.1093/bioinformatics/btx458.

PMID:
29036359
6.

Create, run, share, publish, and reference your LC-MS, FIA-MS, GC-MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics.

Guitton Y, Tremblay-Franco M, Le Corguillé G, Martin JF, Pétéra M, Roger-Mele P, Delabrière A, Goulitquer S, Monsoor M, Duperier C, Canlet C, Servien R, Tardivel P, Caron C, Giacomoni F, Thévenot EA.

Int J Biochem Cell Biol. 2017 Dec;93:89-101. doi: 10.1016/j.biocel.2017.07.002. Epub 2017 Jul 12.

PMID:
28710041
7.

biosigner: A New Method for the Discovery of Significant Molecular Signatures from Omics Data.

Rinaudo P, Boudah S, Junot C, Thévenot EA.

Front Mol Biosci. 2016 Jun 21;3:26. doi: 10.3389/fmolb.2016.00026. eCollection 2016.

9.

Analysis of the Human Adult Urinary Metabolome Variations with Age, Body Mass Index, and Gender by Implementing a Comprehensive Workflow for Univariate and OPLS Statistical Analyses.

Thévenot EA, Roux A, Xu Y, Ezan E, Junot C.

J Proteome Res. 2015 Aug 7;14(8):3322-35. doi: 10.1021/acs.jproteome.5b00354. Epub 2015 Jul 2.

PMID:
26088811
10.

Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics.

Giacomoni F, Le Corguillé G, Monsoor M, Landi M, Pericard P, Pétéra M, Duperier C, Tremblay-Franco M, Martin JF, Jacob D, Goulitquer S, Thévenot EA, Caron C.

Bioinformatics. 2015 May 1;31(9):1493-5. doi: 10.1093/bioinformatics/btu813. Epub 2014 Dec 19.

Supplemental Content

Loading ...
Support Center