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Items: 27

1.

Untargeted metabolomic profiling of Sphagnum fallax reveals novel antimicrobial metabolites.

Fudyma JD, Lyon J, AminiTabrizi R, Gieschen H, Chu RK, Hoyt DW, Kyle JE, Toyoda J, Tolic N, Heyman HM, Hess NJ, Metz TO, Tfaily MM.

Plant Direct. 2019 Nov 12;3(11):e00179. doi: 10.1002/pld3.179. eCollection 2019 Nov.

2.

Evaluation of In Silico Multifeature Libraries for Providing Evidence for the Presence of Small Molecules in Synthetic Blinded Samples.

Nuñez JR, Colby SM, Thomas DG, Tfaily MM, Tolic N, Ulrich EM, Sobus JR, Metz TO, Teeguarden JG, Renslow RS.

J Chem Inf Model. 2019 Sep 23;59(9):4052-4060. doi: 10.1021/acs.jcim.9b00444. Epub 2019 Aug 20.

PMID:
31430141
3.

Online supercritical fluid extraction mass spectrometry (SFE-LC-FTMS) for sensitive characterization of soil organic matter.

Shen Y, Zhao R, Tolić N, Tfaily MM, Robinson EW, Boiteau R, Paša-Tolić L, Hess NJ.

Faraday Discuss. 2019 Aug 15;218(0):157-171. doi: 10.1039/c9fd00011a.

PMID:
31155623
4.

Lipid Mini-On: mining and ontology tool for enrichment analysis of lipidomic data.

Clair G, Reehl S, Stratton KG, Monroe ME, Tfaily MM, Ansong C, Kyle JE.

Bioinformatics. 2019 Nov 1;35(21):4507-4508. doi: 10.1093/bioinformatics/btz250.

PMID:
30977807
5.

Single-throughput Complementary High-resolution Analytical Techniques for Characterizing Complex Natural Organic Matter Mixtures.

Tfaily MM, Wilson RM, Brewer HM, Chu RK, Heyman HM, Hoyt DW, Kyle JE, Purvine SO.

J Vis Exp. 2019 Jan 7;(143). doi: 10.3791/59035.

PMID:
30663714
6.

Atmo-ecometabolomics: a novel atmospheric particle chemical characterization methodology for ecological research.

Rivas-Ubach A, Liu Y, Steiner AL, Sardans J, Tfaily MM, Kulkarni G, Kim YM, Bourrianne E, Paša-Tolić L, Peñuelas J, Guenther A.

Environ Monit Assess. 2019 Jan 16;191(2):78. doi: 10.1007/s10661-019-7205-x.

PMID:
30649631
7.

Compositional changes of dissolved organic carbon during its dynamic desorption from hyporheic zone sediments.

Zhou C, Liu Y, Liu C, Liu Y, Tfaily MM.

Sci Total Environ. 2019 Mar 25;658:16-23. doi: 10.1016/j.scitotenv.2018.12.189. Epub 2018 Dec 13.

PMID:
30572211
8.

Redox Fluctuations Control the Coupled Cycling of Iron and Carbon in Tropical Forest Soils.

Bhattacharyya A, Campbell AN, Tfaily MM, Lin Y, Kukkadapu RK, Silver WL, Nico PS, Pett-Ridge J.

Environ Sci Technol. 2018 Dec 18;52(24):14129-14139. doi: 10.1021/acs.est.8b03408. Epub 2018 Dec 7.

PMID:
30451506
9.

Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone.

Graham EB, Crump AR, Kennedy DW, Arntzen E, Fansler S, Purvine SO, Nicora CD, Nelson W, Tfaily MM, Stegen JC.

Sci Total Environ. 2018 Nov 15;642:742-753. doi: 10.1016/j.scitotenv.2018.05.256. Epub 2018 Jun 17.

PMID:
29920461
10.

Dispersal limitation and thermodynamic constraints govern spatial structure of permafrost microbial communities.

Bottos EM, Kennedy DW, Romero EB, Fansler SJ, Brown JM, Bramer LM, Chu RK, Tfaily MM, Jansson JK, Stegen JC.

FEMS Microbiol Ecol. 2018 Aug 1;94(8). doi: 10.1093/femsec/fiy110.

PMID:
29912311
11.

Spatial-temporal variations of dissolved organic nitrogen molecular composition in agricultural runoff water.

Li L, He ZL, Tfaily MM, Inglett P, Stoffella PJ.

Water Res. 2018 Jun 15;137:375-383. doi: 10.1016/j.watres.2018.01.035. Epub 2018 Mar 16.

PMID:
29555116
12.

Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil.

Yao Q, Li Z, Song Y, Wright SJ, Guo X, Tringe SG, Tfaily MM, Paša-Tolić L, Hazen TC, Turner BL, Mayes MA, Pan C.

Nat Ecol Evol. 2018 Mar;2(3):499-509. doi: 10.1038/s41559-017-0463-5. Epub 2018 Jan 22.

PMID:
29358607
13.

A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements.

Orton DJ, Tfaily MM, Moore RJ, LaMarche BL, Zheng X, Fillmore TL, Chu RK, Weitz KK, Monroe ME, Kelly RT, Smith RD, Baker ES.

Anal Chem. 2018 Jan 2;90(1):737-744. doi: 10.1021/acs.analchem.7b02986. Epub 2017 Dec 13.

14.

Formularity: Software for Automated Formula Assignment of Natural and Other Organic Matter from Ultrahigh-Resolution Mass Spectra.

Tolić N, Liu Y, Liyu A, Shen Y, Tfaily MM, Kujawinski EB, Longnecker K, Kuo LJ, Robinson EW, Paša-Tolić L, Hess NJ.

Anal Chem. 2017 Dec 5;89(23):12659-12665. doi: 10.1021/acs.analchem.7b03318. Epub 2017 Nov 21.

PMID:
29120613
15.

Shifts in pore connectivity from precipitation versus groundwater rewetting increases soil carbon loss after drought.

Smith AP, Bond-Lamberty B, Benscoter BW, Tfaily MM, Hinkle CR, Liu C, Bailey VL.

Nat Commun. 2017 Nov 6;8(1):1335. doi: 10.1038/s41467-017-01320-x.

16.

Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism.

Staley C, Ferrieri AP, Tfaily MM, Cui Y, Chu RK, Wang P, Shaw JB, Ansong CK, Brewer H, Norbeck AD, Markillie M, do Amaral F, Tuleski T, Pellizzaro T, Agtuca B, Ferrieri R, Tringe SG, Paša-Tolić L, Stacey G, Sadowsky MJ.

Microbiome. 2017 Jun 24;5(1):65. doi: 10.1186/s40168-017-0287-1.

17.

Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry.

Tfaily MM, Chu RK, Toyoda J, Tolić N, Robinson EW, Paša-Tolić L, Hess NJ.

Anal Chim Acta. 2017 Jun 15;972:54-61. doi: 10.1016/j.aca.2017.03.031. Epub 2017 Mar 31.

PMID:
28495096
18.

Stability of peatland carbon to rising temperatures.

Wilson RM, Hopple AM, Tfaily MM, Sebestyen SD, Schadt CW, Pfeifer-Meister L, Medvedeff C, McFarlane KJ, Kostka JE, Kolton M, Kolka RK, Kluber LA, Keller JK, Guilderson TP, Griffiths NA, Chanton JP, Bridgham SD, Hanson PJ.

Nat Commun. 2016 Dec 13;7:13723. doi: 10.1038/ncomms13723.

19.

Unambiguous identification and discovery of bacterial siderophores by direct injection 21 Tesla Fourier transform ion cyclotron resonance mass spectrometry.

Walker LR, Tfaily MM, Shaw JB, Hess NJ, Paša-Tolić L, Koppenaal DW.

Metallomics. 2017 Jan 25;9(1):82-92. doi: 10.1039/c6mt00201c.

PMID:
27905613
20.

Advanced solvent based methods for molecular characterization of soil organic matter by high-resolution mass spectrometry.

Tfaily MM, Chu RK, Tolić N, Roscioli KM, Anderton CR, Paša-Tolić L, Robinson EW, Hess NJ.

Anal Chem. 2015;87(10):5206-15. doi: 10.1021/acs.analchem.5b00116. Epub 2015 Apr 30.

PMID:
25884232
21.

Utilization of PARAFAC-Modeled Excitation-Emission Matrix (EEM) Fluorescence Spectroscopy to Identify Biogeochemical Processing of Dissolved Organic Matter in a Northern Peatland.

Tfaily MM, Corbett JE, Wilson R, Chanton JP, Glaser PH, Cawley KM, Jaffé R, Cooper WT.

Photochem Photobiol. 2015 May-Jun;91(3):684-95. doi: 10.1111/php.12448. Epub 2015 Apr 8.

PMID:
25772776
22.

Changes in peat chemistry associated with permafrost thaw increase greenhouse gas production.

Hodgkins SB, Tfaily MM, McCalley CK, Logan TA, Crill PM, Saleska SR, Rich VI, Chanton JP.

Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):5819-24. doi: 10.1073/pnas.1314641111. Epub 2014 Apr 7.

23.

Microbial community stratification linked to utilization of carbohydrates and phosphorus limitation in a boreal peatland at Marcell Experimental Forest, Minnesota, USA.

Lin X, Tfaily MM, Steinweg JM, Chanton P, Esson K, Yang ZK, Chanton JP, Cooper W, Schadt CW, Kostka JE.

Appl Environ Microbiol. 2014 Jun;80(11):3518-30. doi: 10.1128/AEM.00205-14. Epub 2014 Mar 28.

24.

Microbial metabolic potential for carbon degradation and nutrient (nitrogen and phosphorus) acquisition in an ombrotrophic peatland.

Lin X, Tfaily MM, Green SJ, Steinweg JM, Chanton P, Imvittaya A, Chanton JP, Cooper W, Schadt C, Kostka JE.

Appl Environ Microbiol. 2014 Jun;80(11):3531-40. doi: 10.1128/AEM.00206-14. Epub 2014 Mar 28.

25.

Microbial community structure and activity linked to contrasting biogeochemical gradients in bog and fen environments of the Glacial Lake Agassiz Peatland.

Lin X, Green S, Tfaily MM, Prakash O, Konstantinidis KT, Corbett JE, Chanton JP, Cooper WT, Kostka JE.

Appl Environ Microbiol. 2012 Oct;78(19):7023-31. doi: 10.1128/AEM.01750-12. Epub 2012 Jul 27.

26.

Comparison of dialysis and solid-phase extraction for isolation and concentration of dissolved organic matter prior to Fourier transform ion cyclotron resonance mass spectrometry.

Tfaily MM, Hodgkins S, Podgorski DC, Chanton JP, Cooper WT.

Anal Bioanal Chem. 2012 Aug;404(2):447-57. doi: 10.1007/s00216-012-6120-6. Epub 2012 Jun 15.

PMID:
22699231
27.

Influence of acidification on the optical properties and molecular composition of dissolved organic matter.

Tfaily MM, Podgorski DC, Corbett JE, Chanton JP, Cooper WT.

Anal Chim Acta. 2011 Nov 14;706(2):261-7. doi: 10.1016/j.aca.2011.08.037. Epub 2011 Aug 31.

PMID:
22023860

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