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Items: 49


Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma.

Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, Li Y, Rykunov D, Li QK, Chen LS, Ozbek U, Vasaikar S, Wu Y, Yoo S, Chowdhury S, Wyczalkowski MA, Ji J, Schnaubelt M, Kong A, Sethuraman S, Avtonomov DM, Ao M, Colaprico A, Cao S, Cho KC, Kalayci S, Ma S, Liu W, Ruggles K, Calinawan A, Gümüş ZH, Geizler D, Kawaler E, Teo GC, Wen B, Zhang Y, Keegan S, Li K, Chen F, Edwards N, Pierorazio PM, Chen XS, Pavlovich CP, Hakimi AA, Brominski G, Hsieh JJ, Antczak A, Omelchenko T, Lubinski J, Wiznerowicz M, Linehan WM, Kinsinger CR, Thiagarajan M, Boja ES, Mesri M, Hiltke T, Robles AI, Rodriguez H, Qian J, Fenyö D, Zhang B, Ding L, Schadt E, Chinnaiyan AM, Zhang Z, Omenn GS, Cieslik M, Chan DW, Nesvizhskii AI, Wang P, Zhang H; Clinical Proteomic Tumor Analysis Consortium.

Cell. 2019 Oct 31;179(4):964-983.e31. doi: 10.1016/j.cell.2019.10.007.


Primer-free FISH probes from metagenomics/metatranscriptomics data permit the study of uncharacterised taxa in complex microbial communities.

Tan SM, Yung PYM, Hutchinson PE, Xie C, Teo GH, Ismail MH, Drautz-Moses DI, Little PFR, Williams RBH, Cohen Y.

NPJ Biofilms Microbiomes. 2019 Jun 25;5:17. doi: 10.1038/s41522-019-0090-9. eCollection 2019.


Characterization of a GDP-Fucose Transporter and a Fucosyltransferase Involved in the Fucosylation of Glycoproteins in the Diatom Phaeodactylum tricornutum.

Zhang P, Burel C, Plasson C, Kiefer-Meyer MC, Ovide C, Gügi B, Wan C, Teo G, Mak A, Song Z, Driouich A, Lerouge P, Bardor M.

Front Plant Sci. 2019 May 21;10:610. doi: 10.3389/fpls.2019.00610. eCollection 2019.


Multi-omics profiling of CHO parental hosts reveals cell line-specific variations in bioprocessing traits.

Lakshmanan M, Kok YJ, Lee AP, Kyriakopoulos S, Lim HL, Teo G, Poh SL, Tang WQ, Hong J, Tan AH, Bi X, Ho YS, Zhang P, Ng SK, Lee DY.

Biotechnol Bioeng. 2019 Sep;116(9):2117-2129. doi: 10.1002/bit.27014. Epub 2019 May 20.


Zerumbone-Loaded Nanostructured Lipid Carrier Induces Apoptosis of Canine Mammary Adenocarcinoma Cells.

Foong JN, Selvarajah GT, Rasedee A, Rahman HS, How CW, Beh CY, Teo GY, Ku CL.

Biomed Res Int. 2018 Oct 15;2018:8691569. doi: 10.1155/2018/8691569. eCollection 2018.


New insights into the cellular temporal response to proteostatic stress.

Rendleman J, Cheng Z, Maity S, Kastelic N, Munschauer M, Allgoewer K, Teo G, Zhang YBM, Lei A, Parker B, Landthaler M, Freeberg L, Kuersten S, Choi H, Vogel C.

Elife. 2018 Oct 12;7. pii: e39054. doi: 10.7554/eLife.39054.


Influence of comorbidities and clinical prediction model on neurological prognostication post out-of-hospital cardiac arrest.

Huang W, Teo GKW, Tan JW, Ahmad NS, Koh HH, Ong MEH.

Heart Asia. 2018 Jun 15;10(2):e011016. doi: 10.1136/heartasia-2018-011016. eCollection 2018.


Targeting Chondroitin Sulfate Glycosaminoglycans to Treat Cardiac Fibrosis in Pathological Remodeling.

Zhao RR, Ackers-Johnson M, Stenzig J, Chen C, Ding T, Zhou Y, Wang P, Ng SL, Li PY, Teo G, Rudd PM, Fawcett JW, Foo RSY.

Circulation. 2018 Jun 5;137(23):2497-2513. doi: 10.1161/CIRCULATIONAHA.117.030353. Epub 2018 Jan 25.


PECAplus: statistical analysis of time-dependent regulatory changes in dynamic single-omics and dual-omics experiments.

Teo G, Bin Zhang Y, Vogel C, Choi H.

NPJ Syst Biol Appl. 2017 Dec 19;4:3. doi: 10.1038/s41540-017-0040-1. eCollection 2018.


Training for vigilance on the move: a video game-based paradigm for sustained attention.

Szalma JL, Daly TN, Teo GWL, Hancock GM, Hancock PA.

Ergonomics. 2018 Apr;61(4):482-505. doi: 10.1080/00140139.2017.1397199. Epub 2018 Jan 4.


Enhancing the effectiveness of human-robot teaming with a closed-loop system.

Teo G, Reinerman-Jones L, Matthews G, Szalma J, Jentsch F, Hancock P.

Appl Ergon. 2018 Feb;67:91-103. doi: 10.1016/j.apergo.2017.07.007. Epub 2017 Oct 3.


Shotgun Glycomics Identifies Tumor-Associated Glycan Ligands Bound by an Ovarian Carcinoma-Specific Monoclonal Antibody.

Liau B, Tan B, Teo G, Zhang P, Choo A, Rudd PM.

Sci Rep. 2017 Nov 3;7(1):14489. doi: 10.1038/s41598-017-15123-z.


Mammalian Systems Biotechnology Reveals Global Cellular Adaptations in a Recombinant CHO Cell Line.

Yusufi FNK, Lakshmanan M, Ho YS, Loo BLW, Ariyaratne P, Yang Y, Ng SK, Tan TRM, Yeo HC, Lim HL, Ng SW, Hiu AP, Chow CP, Wan C, Chen S, Teo G, Song G, Chin JX, Ruan X, Sung KWK, Hu WS, Yap MGS, Bardor M, Nagarajan N, Lee DY.

Cell Syst. 2017 May 24;4(5):530-542.e6. doi: 10.1016/j.cels.2017.04.009.


Priming with high and low respiratory allergen dose induces differential CD4+ T helper type 2 cells and IgE/IgG1 antibody responses in mice.

Furuhashi K, Chua YL, Wong KHS, Zhou Q, Lee DCP, Liong KH, Teo GH, Hutchinson PE, Kemeny DM.

Immunology. 2017 Jun;151(2):227-238. doi: 10.1111/imm.12726. Epub 2017 Apr 3.


Untargeted, spectral library-free analysis of data-independent acquisition proteomics data generated using Orbitrap mass spectrometers.

Tsou CC, Tsai CF, Teo GC, Chen YJ, Nesvizhskii AI.

Proteomics. 2016 Aug;16(15-16):2257-71. doi: 10.1002/pmic.201500526. Epub 2016 Jul 22.


SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data.

Teo G, Koh H, Fermin D, Lambert JP, Knight JD, Gingras AC, Choi H.

Proteomics. 2016 Aug;16(15-16):2238-45. doi: 10.1002/pmic.201500499. Epub 2016 May 27.


Differential dynamics of the mammalian mRNA and protein expression response to misfolding stress.

Cheng Z, Teo G, Krueger S, Rock TM, Koh HW, Choi H, Vogel C.

Mol Syst Biol. 2016 Jan 20;12(1):855. doi: 10.15252/msb.20156423.


Inactivation of GDP-fucose transporter gene (Slc35c1) in CHO cells by ZFNs, TALENs and CRISPR-Cas9 for production of fucose-free antibodies.

Chan KF, Shahreel W, Wan C, Teo G, Hayati N, Tay SJ, Tong WH, Yang Y, Rudd PM, Zhang P, Song Z.

Biotechnol J. 2016 Mar;11(3):399-414. doi: 10.1002/biot.201500331. Epub 2015 Dec 11.


mapDIA: Preprocessing and statistical analysis of quantitative proteomics data from data independent acquisition mass spectrometry.

Teo G, Kim S, Tsou CC, Collins B, Gingras AC, Nesvizhskii AI, Choi H.

J Proteomics. 2015 Nov 3;129:108-120. doi: 10.1016/j.jprot.2015.09.013. Epub 2015 Sep 15.


Micropatterned Surfaces for Atmospheric Water Condensation via Controlled Radical Polymerization and Thin Film Dewetting.

Wong I, Teo GH, Neto C, Thickett SC.

ACS Appl Mater Interfaces. 2015 Sep 30;7(38):21562-70. doi: 10.1021/acsami.5b06856. Epub 2015 Sep 21.


MetTailor: dynamic block summary and intensity normalization for robust analysis of mass spectrometry data in metabolomics.

Chen G, Cui L, Teo GS, Ong CN, Tan CS, Choi H.

Bioinformatics. 2015 Nov 15;31(22):3645-52. doi: 10.1093/bioinformatics/btv434. Epub 2015 Jul 27.


Multifunctional cytomegalovirus (CMV)-specific CD8(+) T cells are not restricted by telomere-related senescence in young or old adults.

Riddell NE, Griffiths SJ, Rivino L, King DC, Teo GH, Henson SM, Cantisan S, Solana R, Kemeny DM, MacAry PA, Larbi A, Akbar AN.

Immunology. 2015 Apr;144(4):549-60. doi: 10.1111/imm.12409.


Intravital imaging of mesenchymal stem cell trafficking and association with platelets and neutrophils.

Teo GS, Yang Z, Carman CV, Karp JM, Lin CP.

Stem Cells. 2015 Jan;33(1):265-77. doi: 10.1002/stem.1848.


Vigilance on the move: video game-based measurement of sustained attention.

Szalma JL, Schmidt TN, Teo GW, Hancock PA.

Ergonomics. 2014;57(9):1315-36. doi: 10.1080/00140139.2014.921329. Epub 2014 Jul 8.


Producing recombinant therapeutic glycoproteins with enhanced sialylation using CHO-gmt4 glycosylation mutant cells.

Goh JS, Liu Y, Chan KF, Wan C, Teo G, Zhang P, Zhang Y, Song Z.

Bioengineered. 2014 Jul-Aug;5(4):269–73. doi: 10.4161/bioe.29490. Epub 2014 Jun 9.


SAINTexpress: improvements and additional features in Significance Analysis of INTeractome software.

Teo G, Liu G, Zhang J, Nesvizhskii AI, Gingras AC, Choi H.

J Proteomics. 2014 Apr 4;100:37-43. doi: 10.1016/j.jprot.2013.10.023. Epub 2013 Oct 26.


Central primary primitive neuroectodermal tumor (cPNET) arising from an ovarian mature cystic teratoma in pregnancy: A case report and review of medical literature.

Lim YK, Ku CW, Teo GC, Lim SL, Tee CS.

Gynecol Oncol Case Rep. 2013 Jan 23;4:56-9. doi: 10.1016/j.gynor.2013.01.004. eCollection 2013.


Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions.

Couzens AL, Knight JD, Kean MJ, Teo G, Weiss A, Dunham WH, Lin ZY, Bagshaw RD, Sicheri F, Pawson T, Wrana JL, Choi H, Gingras AC.

Sci Signal. 2013 Nov 19;6(302):rs15. doi: 10.1126/scisignal.2004712.


PECA: a novel statistical tool for deconvoluting time-dependent gene expression regulation.

Teo G, Vogel C, Ghosh D, Kim S, Choi H.

J Proteome Res. 2014 Jan 3;13(1):29-37. doi: 10.1021/pr400855q. Epub 2013 Nov 26.


Highly sialylated recombinant human erythropoietin production in large-scale perfusion bioreactor utilizing CHO-gmt4 (JW152) with restored GnT I function.

Goh JS, Liu Y, Liu H, Chan KF, Wan C, Teo G, Zhou X, Xie F, Zhang P, Zhang Y, Song Z.

Biotechnol J. 2014 Jan;9(1):100-9. doi: 10.1002/biot.201300301. Epub 2013 Dec 10.


Exploring the N-glycosylation pathway in Chlamydomonas reinhardtii unravels novel complex structures.

Mathieu-Rivet E, Scholz M, Arias C, Dardelle F, Schulze S, Le Mauff F, Teo G, Hochmal AK, Blanco-Rivero A, Loutelier-Bourhis C, Kiefer-Meyer MC, Fufezan C, Burel C, Lerouge P, Martinez F, Bardor M, Hippler M.

Mol Cell Proteomics. 2013 Nov;12(11):3160-83. doi: 10.1074/mcp.M113.028191. Epub 2013 Aug 2.


Sensorial, biochemical and molecular changes in Raboso Piave grape berries applying "Double Maturation Raisonnée" and late harvest techniques.

Corso M, Ziliotto F, Rizzini FM, Teo G, Cargnello G, Bonghi C.

Plant Sci. 2013 Jul;208:50-7. doi: 10.1016/j.plantsci.2013.03.010. Epub 2013 Mar 26.


Control of IgG LC:HC ratio in stably transfected CHO cells and study of the impact on expression, aggregation, glycosylation and conformational stability.

Ho SC, Koh EY, van Beers M, Mueller M, Wan C, Teo G, Song Z, Tong YW, Bardor M, Yang Y.

J Biotechnol. 2013 Jun 10;165(3-4):157-66. doi: 10.1016/j.jbiotec.2013.03.019. Epub 2013 Apr 10.


Differential targeting of viral components by CD4+ versus CD8+ T lymphocytes in dengue virus infection.

Rivino L, Kumaran EA, Jovanovic V, Nadua K, Teo EW, Pang SW, Teo GH, Gan VC, Lye DC, Leo YS, Hanson BJ, Smith KG, Bertoletti A, Kemeny DM, MacAry PA.

J Virol. 2013 Mar;87(5):2693-706. doi: 10.1128/JVI.02675-12. Epub 2012 Dec 19.


Bioinspired multivalent DNA network for capture and release of cells.

Zhao W, Cui CH, Bose S, Guo D, Shen C, Wong WP, Halvorsen K, Farokhzad OC, Teo GS, Phillips JA, Dorfman DM, Karnik R, Karp JM.

Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19626-31. doi: 10.1073/pnas.1211234109. Epub 2012 Nov 12.


Mesenchymal stem cells transmigrate between and directly through tumor necrosis factor-α-activated endothelial cells via both leukocyte-like and novel mechanisms.

Teo GS, Ankrum JA, Martinelli R, Boetto SE, Simms K, Sciuto TE, Dvorak AM, Karp JM, Carman CV.

Stem Cells. 2012 Nov;30(11):2472-86. doi: 10.1002/stem.1198.


Identification of functional elements of the GDP-fucose transporter SLC35C1 using a novel Chinese hamster ovary mutant.

Zhang P, Haryadi R, Chan KF, Teo G, Goh J, Pereira NA, Feng H, Song Z.

Glycobiology. 2012 Jul;22(7):897-911. doi: 10.1093/glycob/cws064. Epub 2012 Apr 6.


Spatial and temporal task characteristics as stress: a test of the dynamic adaptability theory of stress, workload, and performance.

Szalma JL, Teo GW.

Acta Psychol (Amst). 2012 Mar;139(3):471-85. doi: 10.1016/j.actpsy.2011.12.009. Epub 2012 Feb 17.


DriveID: safety innovation through individuation.

Sawyer B, Teo G, Mouloua M.

Work. 2012;41 Suppl 1:4273-8. doi: 10.3233/WOR-2012-0722-4273.


Cellular and extracellular programming of cell fate through engineered intracrine-, paracrine-, and endocrine-like mechanisms.

Sarkar D, Ankrum JA, Teo GS, Carman CV, Karp JM.

Biomaterials. 2011 Apr;32(11):3053-61. doi: 10.1016/j.biomaterials.2010.12.036. Epub 2011 Jan 22.


A high-throughput method for quantification of glycoprotein sialylation.

Markely LR, Ong BT, Hoi KM, Teo G, Lu MY, Wang DI.

Anal Biochem. 2010 Dec 1;407(1):128-33. doi: 10.1016/j.ab.2010.07.029. Epub 2010 Aug 6.


Chemistry and material science at the cell surface.

Zhao W, Teo GS, Kumar N, Karp JM.

Mater Today (Kidlington). 2010 Apr;13(4):14-21.


Alanine-shaving mutagenesis to determine key interfacial residues governing the assembly of a nano-cage maxi-ferritin.

Zhang Y, Raudah S, Teo H, Teo GW, Fan R, Sun X, Orner BP.

J Biol Chem. 2010 Apr 16;285(16):12078-86. doi: 10.1074/jbc.M109.092445. Epub 2010 Feb 5.


Chemical engineering of mesenchymal stem cells to induce a cell rolling response.

Sarkar D, Vemula PK, Teo GS, Spelke D, Karnik R, Wee le Y, Karp JM.

Bioconjug Chem. 2008 Nov 19;19(11):2105-9. doi: 10.1021/bc800345q.


Silencing leaf sorbitol synthesis alters long-distance partitioning and apple fruit quality.

Teo G, Suzuki Y, Uratsu SL, Lampinen B, Ormonde N, Hu WK, DeJong TM, Dandekar AM.

Proc Natl Acad Sci U S A. 2006 Dec 5;103(49):18842-7. Epub 2006 Nov 28.


Apple (Malus x domestica).

Dandekar AM, Teo G, Uratsu SL, Tricoli D.

Methods Mol Biol. 2006;344:253-61.


Effect of down-regulation of ethylene biosynthesis on fruit flavor complex in apple fruit.

Dandekari AM, Teo G, Defilippi BG, Uratsu SL, Passey AJ, Kader AA, Stow JR, Colgan RJ, James DJ.

Transgenic Res. 2004 Aug;13(4):373-84.


Adhesion contact dynamics of primary hepatocytes on poly(ethylene terephthalate) surface.

Tan WJ, Teo GP, Liao K, Leong KW, Mao HQ, Chan V.

Biomaterials. 2005 Mar;26(8):891-8.


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