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Items: 1 to 50 of 111

1.
2.

OMA standalone: orthology inference among public and custom genomes and transcriptomes.

Altenhoff AM, Levy J, Zarowiecki M, Tomiczek B, Warwick Vesztrocy A, Dalquen DA, Müller S, Telford MJ, Glover NM, Dylus D, Dessimoz C.

Genome Res. 2019 Jul;29(7):1152-1163. doi: 10.1101/gr.243212.118. Epub 2019 Jun 24.

3.

Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria.

Philippe H, Poustka AJ, Chiodin M, Hoff KJ, Dessimoz C, Tomiczek B, Schiffer PH, Müller S, Domman D, Horn M, Kuhl H, Timmermann B, Satoh N, Hikosaka-Katayama T, Nakano H, Rowe ML, Elphick MR, Thomas-Chollier M, Hankeln T, Mertes F, Wallberg A, Rast JP, Copley RR, Martinez P, Telford MJ.

Curr Biol. 2019 Jun 3;29(11):1818-1826.e6. doi: 10.1016/j.cub.2019.04.009. Epub 2019 May 16.

PMID:
31104936
4.

Evolution: Arrow Worms Find Their Place on the Tree of Life.

Telford MJ.

Curr Biol. 2019 Mar 4;29(5):R152-R154. doi: 10.1016/j.cub.2018.12.029.

PMID:
30836082
5.

Is it possible to reconstruct an accurate cell lineage using CRISPR recorders?

Salvador-Martínez I, Grillo M, Averof M, Telford MJ.

Elife. 2019 Jan 28;8. pii: e40292. doi: 10.7554/eLife.40292.

6.

The mitochondrial genomes of the mesozoans Intoshia linei, Dicyema sp. and Dicyema japonicum.

Robertson HE, Schiffer PH, Telford MJ.

Parasitol Open. 2018;4. pii: e16. doi: 10.1017/pao.2018.12. Epub 2018 Aug 2.

7.

A parthenogenetic quasi-program causes teratoma-like tumors during aging in wild-type C. elegans.

Wang H, Zhao Y, Ezcurra M, Benedetto A, Gilliat AF, Hellberg J, Ren Z, Galimov ER, Athigapanich T, Girstmair J, Telford MJ, Dolphin CT, Zhang Z, Gems D.

NPJ Aging Mech Dis. 2018 Jun 13;4:6. doi: 10.1038/s41514-018-0025-3. eCollection 2018.

8.

Orthonectids Are Highly Degenerate Annelid Worms.

Schiffer PH, Robertson HE, Telford MJ.

Curr Biol. 2018 Jun 18;28(12):1970-1974.e3. doi: 10.1016/j.cub.2018.04.088. Epub 2018 May 31.

9.

Correction: Genetic factors affecting EBV copy number in lymphoblastoid cell lines derived from the 1000 Genome Project samples.

Mandage R, Telford M, Rodríguez JA, Farré X, Laayouni H, Marigorta UM, Cundiff C, Heredia-Genestar JM, Navarro A, Santpere G.

PLoS One. 2018 Apr 30;13(4):e0196623. doi: 10.1371/journal.pone.0196623. eCollection 2018.

10.
11.

A software tool 'CroCo' detects pervasive cross-species contamination in next generation sequencing data.

Simion P, Belkhir K, François C, Veyssier J, Rink JC, Manuel M, Philippe H, Telford MJ.

BMC Biol. 2018 Mar 5;16(1):28. doi: 10.1186/s12915-018-0486-7.

12.

Whole genome diversity of inherited chromosomally integrated HHV-6 derived from healthy individuals of diverse geographic origin.

Telford M, Navarro A, Santpere G.

Sci Rep. 2018 Feb 22;8(1):3472. doi: 10.1038/s41598-018-21645-x. Erratum in: Sci Rep. 2018 Apr 17;8(1):6357.

13.

SALMFamide2 and serotonin immunoreactivity in the nervous system of some acoels (Xenacoelomorpha).

Dittmann IL, Zauchner T, Nevard LM, Telford MJ, Egger B.

J Morphol. 2018 May;279(5):589-597. doi: 10.1002/jmor.20794. Epub 2018 Feb 1.

14.

Genetic factors affecting EBV copy number in lymphoblastoid cell lines derived from the 1000 Genome Project samples.

Mandage R, Telford M, Rodríguez JA, Farré X, Layouni H, Marigorta UM, Cundiff C, Heredia-Genestar JM, Navarro A, Santpere G.

PLoS One. 2017 Jun 27;12(6):e0179446. doi: 10.1371/journal.pone.0179446. eCollection 2017. Erratum in: PLoS One. 2018 Apr 30;13(4):e0196623.

15.

Healthcare students' experiences when integrating e-learning and flipped classroom instructional approaches.

Telford M, Senior E.

Br J Nurs. 2017 Jun 8;26(11):617-622. doi: 10.12968/bjon.2017.26.11.617.

PMID:
28594611
16.

The mitochondrial genomes of the acoelomorph worms Paratomella rubra, Isodiametra pulchra and Archaphanostoma ylvae.

Robertson HE, Lapraz F, Egger B, Telford MJ, Schiffer PH.

Sci Rep. 2017 May 12;7(1):1847. doi: 10.1038/s41598-017-01608-4.

17.

The experiences of students in interprofessional learning.

Telford M, Senior E.

Br J Nurs. 2017 Mar 23;26(6):350-354. doi: 10.12968/bjon.2017.26.6.350.

PMID:
28345988
18.

Phenotypes optimized for early-life reproduction exhibit faster somatic deterioration with age, revealing a latent cost of high condition.

Adler MI, Telford M, Bonduriansky R.

J Evol Biol. 2016 Dec;29(12):2436-2446. doi: 10.1111/jeb.12968. Epub 2016 Sep 7.

19.

Light-sheet microscopy for everyone? Experience of building an OpenSPIM to study flatworm development.

Girstmair J, Zakrzewski A, Lapraz F, Handberg-Thorsager M, Tomancak P, Pitrone PG, Simpson F, Telford MJ.

BMC Dev Biol. 2016 Jun 30;16(1):22. doi: 10.1186/s12861-016-0122-0.

20.

Zoology: War of the Worms.

Telford MJ, Copley RR.

Curr Biol. 2016 Apr 25;26(8):R335-7. doi: 10.1016/j.cub.2016.03.015.

21.

Evolution: A sisterly dispute.

Telford MJ, Moroz LL, Halanych KM.

Nature. 2016 Jan 21;529(7586):286-7. doi: 10.1038/529286a. No abstract available.

PMID:
26791714
22.

Regulatory circuit rewiring and functional divergence of the duplicate admp genes in dorsoventral axial patterning.

Chang YC, Pai CY, Chen YC, Ting HC, Martinez P, Telford MJ, Yu JK, Su YH.

Dev Biol. 2016 Feb 1;410(1):108-18. doi: 10.1016/j.ydbio.2015.12.015. Epub 2015 Dec 21.

23.

Uncertainty in the Timing of Origin of Animals and the Limits of Precision in Molecular Timescales.

dos Reis M, Thawornwattana Y, Angelis K, Telford MJ, Donoghue PC, Yang Z.

Curr Biol. 2015 Nov 16;25(22):2939-50. Epub 2015 Oct 22.

24.
25.

Phylogenomic Insights into Animal Evolution.

Telford MJ, Budd GE, Philippe H.

Curr Biol. 2015 Oct 5;25(19):R876-87. doi: 10.1016/j.cub.2015.07.060. Review.

26.

Using an integrated teaching and learning approach to deliver inter-professional practice in Public Health.

Senior E, Telford M.

Nurse Educ Today. 2015 Oct;35(10):1013-5. doi: 10.1016/j.nedt.2015.07.009. Epub 2015 Jul 26.

PMID:
26235202
27.

A transcriptomic-phylogenomic analysis of the evolutionary relationships of flatworms.

Egger B, Lapraz F, Tomiczek B, Müller S, Dessimoz C, Girstmair J, Škunca N, Rawlinson KA, Cameron CB, Beli E, Todaro MA, Gammoudi M, Noreña C, Telford MJ.

Curr Biol. 2015 May 18;25(10):1347-53. doi: 10.1016/j.cub.2015.03.034. Epub 2015 Apr 9.

28.

The complete mitochondrial genome of the geophilomorph centipede Strigamia maritima.

Robertson HE, Lapraz F, Rhodes AC, Telford MJ.

PLoS One. 2015 Mar 20;10(3):e0121369. doi: 10.1371/journal.pone.0121369. eCollection 2015.

29.

The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima.

Chipman AD, Ferrier DE, Brena C, Qu J, Hughes DS, Schröder R, Torres-Oliva M, Znassi N, Jiang H, Almeida FC, Alonso CR, Apostolou Z, Aqrawi P, Arthur W, Barna JC, Blankenburg KP, Brites D, Capella-Gutiérrez S, Coyle M, Dearden PK, Du Pasquier L, Duncan EJ, Ebert D, Eibner C, Erikson G, Evans PD, Extavour CG, Francisco L, Gabaldón T, Gillis WJ, Goodwin-Horn EA, Green JE, Griffiths-Jones S, Grimmelikhuijzen CJ, Gubbala S, Guigó R, Han Y, Hauser F, Havlak P, Hayden L, Helbing S, Holder M, Hui JH, Hunn JP, Hunnekuhl VS, Jackson L, Javaid M, Jhangiani SN, Jiggins FM, Jones TE, Kaiser TS, Kalra D, Kenny NJ, Korchina V, Kovar CL, Kraus FB, Lapraz F, Lee SL, Lv J, Mandapat C, Manning G, Mariotti M, Mata R, Mathew T, Neumann T, Newsham I, Ngo DN, Ninova M, Okwuonu G, Ongeri F, Palmer WJ, Patil S, Patraquim P, Pham C, Pu LL, Putman NH, Rabouille C, Ramos OM, Rhodes AC, Robertson HE, Robertson HM, Ronshaugen M, Rozas J, Saada N, Sánchez-Gracia A, Scherer SE, Schurko AM, Siggens KW, Simmons D, Stief A, Stolle E, Telford MJ, Tessmar-Raible K, Thornton R, van der Zee M, von Haeseler A, Williams JM, Willis JH, Wu Y, Zou X, Lawson D, Muzny DM, Worley KC, Gibbs RA, Akam M, Richards S.

PLoS Biol. 2014 Nov 25;12(11):e1002005. doi: 10.1371/journal.pbio.1002005. eCollection 2014 Nov.

30.

Phylogenomic analysis of echinoderm class relationships supports Asterozoa.

Telford MJ, Lowe CJ, Cameron CB, Ortega-Martinez O, Aronowicz J, Oliveri P, Copley RR.

Proc Biol Sci. 2014 Jul 7;281(1786). pii: 20140479. doi: 10.1098/rspb.2014.0479.

31.

Cellular dynamics during regeneration of the flatworm Monocelis sp. (Proseriata, Platyhelminthes).

Girstmair J, Schnegg R, Telford MJ, Egger B.

Evodevo. 2014 Oct 23;5:37. doi: 10.1186/2041-9139-5-37. eCollection 2014.

32.

Mollusc evolution: seven shells on the sea shore.

Telford MJ.

Curr Biol. 2013 Nov 4;23(21):R952-4. doi: 10.1016/j.cub.2013.09.045.

33.

Put a tiger in your tank: the polyclad flatworm Maritigrella crozieri as a proposed model for evo-devo.

Lapraz F, Rawlinson KA, Girstmair J, Tomiczek B, Berger J, Jékely G, Telford MJ, Egger B.

Evodevo. 2013 Oct 9;4(1):29. doi: 10.1186/2041-9139-4-29.

34.

Xenoturbella bocki exhibits direct development with similarities to Acoelomorpha.

Nakano H, Lundin K, Bourlat SJ, Telford MJ, Funch P, Nyengaard JR, Obst M, Thorndyke MC.

Nat Commun. 2013;4:1537. doi: 10.1038/ncomms2556.

35.

Evolution. The animal tree of life.

Telford MJ.

Science. 2013 Feb 15;339(6121):764-6. doi: 10.1126/science.1234378. No abstract available. Erratum in: Science. 2013 Jun 28;340(6140):1524.

PMID:
23413342
36.

Field et Al. Redux.

Telford MJ.

Evodevo. 2013 Feb 12;4(1):5. doi: 10.1186/2041-9139-4-5.

38.

Cap'n'collar differentiates the mandible from the maxilla in the beetle Tribolium castaneum.

Coulcher JF, Telford MJ.

Evodevo. 2012 Nov 1;3(1):25. doi: 10.1186/2041-9139-3-25.

39.

Invertebrate evolution: bringing order to the molluscan chaos.

Telford MJ, Budd GE.

Curr Biol. 2011 Dec 6;21(23):R964-6. doi: 10.1016/j.cub.2011.10.029. Epub 2011 Dec 5.

40.

MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda.

Campbell LI, Rota-Stabelli O, Edgecombe GD, Marchioro T, Longhorn SJ, Telford MJ, Philippe H, Rebecchi L, Peterson KJ, Pisani D.

Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15920-4. doi: 10.1073/pnas.1105499108. Epub 2011 Sep 6.

41.

Improving animal phylogenies with genomic data.

Telford MJ, Copley RR.

Trends Genet. 2011 May;27(5):186-95. doi: 10.1016/j.tig.2011.02.003. Epub 2011 Mar 15. Review.

PMID:
21414681
42.

Acoelomorph flatworms are deuterostomes related to Xenoturbella.

Philippe H, Brinkmann H, Copley RR, Moroz LL, Nakano H, Poustka AJ, Wallberg A, Peterson KJ, Telford MJ.

Nature. 2011 Feb 10;470(7333):255-8. doi: 10.1038/nature09676.

43.

Welcome to open access publishing at EvoDevo: a macroevolutionary change in sharing data.

Martindale MQ, Telford MJ.

Evodevo. 2010 Jul 5;1(1):1. doi: 10.1186/2041-9139-1-1. No abstract available.

44.

A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata.

Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ.

Proc Biol Sci. 2011 Jan 22;278(1703):298-306. doi: 10.1098/rspb.2010.0590. Epub 2010 Aug 11.

45.

Ecdysozoan mitogenomics: evidence for a common origin of the legged invertebrates, the Panarthropoda.

Rota-Stabelli O, Kayal E, Gleeson D, Daub J, Boore JL, Telford MJ, Pisani D, Blaxter M, Lavrov DV.

Genome Biol Evol. 2010 Jul 12;2:425-40. doi: 10.1093/gbe/evq030.

46.

TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations.

Abascal F, Zardoya R, Telford MJ.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W7-13. doi: 10.1093/nar/gkq291. Epub 2010 Apr 30.

47.

Evidence for multiple independent origins of trans-splicing in Metazoa.

Douris V, Telford MJ, Averof M.

Mol Biol Evol. 2010 Mar;27(3):684-93. doi: 10.1093/molbev/msp286. Epub 2009 Nov 25.

PMID:
19942614
48.

MtZoa: a general mitochondrial amino acid substitutions model for animal evolutionary studies.

Rota-Stabelli O, Yang Z, Telford MJ.

Mol Phylogenet Evol. 2009 Jul;52(1):268-72. doi: 10.1016/j.ympev.2009.01.011. No abstract available.

PMID:
19475713
49.

The mitochondrial genome structure of Xenoturbella bocki (phylum Xenoturbellida) is ancestral within the deuterostomes.

Bourlat SJ, Rota-Stabelli O, Lanfear R, Telford MJ.

BMC Evol Biol. 2009 May 18;9:107. doi: 10.1186/1471-2148-9-107.

50.

Animal evolution: once upon a time.

Telford MJ.

Curr Biol. 2009 Apr 28;19(8):R339-41. doi: 10.1016/j.cub.2009.03.025.

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