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Items: 1 to 50 of 86

1.

Methylome Characterization of Burkholderia pseudomallei Strain 982 at Single-Base Resolution.

Hong KW, Tee KK, Yin WF, Roberts RJ, Chan KG.

Microbiol Resour Announc. 2019 Oct 24;8(43). pii: e00898-19. doi: 10.1128/MRA.00898-19.

2.

Increased Coffee Intake Reduces Circulating HBV DNA and HBsAg Levels in HBeAg-Negative Infection: A Cohort Study.

Chook JB, Ngeow YF, Tee KK, Lee JWT, Mohamed R.

Viruses. 2019 Sep 1;11(9). pii: E808. doi: 10.3390/v11090808.

3.

Comparative global epidemiology of influenza, respiratory syncytial and parainfluenza viruses, 2010-2015.

Lam TT, Tang JW, Lai FY, Zaraket H, Dbaibo G, Bialasiewicz S, Tozer S, Heraud JM, Drews SJ, Hachette T, Chan PK, Koay ES, Lee HK, Tee KK, Liu Y, Fraaij P, Jennings L, Waris M, Krajden M, Corriveau A, Jalal H, Nishimura H, Nymadawa P, Badarch D, Watanabe A, Kabanda A, Sloots T, Kok J, Dwyer DE, Koopmans M; INSPIRE (International Network for the Sequencing of Respiratory Viruses).

J Infect. 2019 Oct;79(4):373-382. doi: 10.1016/j.jinf.2019.07.008. Epub 2019 Jul 16.

PMID:
31323249
4.

Genomic analysis of Hepatitis B virus and its association with disease manifestations in Bangladesh.

Raihan R, Akbar SMF, Al Mahtab M, Takahashi K, Masumoto J, Tabassum S, Tee KK, Binti Mohamed R.

PLoS One. 2019 Jun 28;14(6):e0218744. doi: 10.1371/journal.pone.0218744. eCollection 2019.

5.

Characterization and Transcriptome Studies of Autoinducer Synthase Gene from Multidrug Resistant Acinetobacter baumannii Strain 863.

Ng CK, How KY, Tee KK, Chan KG.

Genes (Basel). 2019 Apr 8;10(4). pii: E282. doi: 10.3390/genes10040282.

6.

Characterization of quorum sensing genes and N-acyl homoserine lactones in Citrobacter amalonaticus strain YG6.

Kher HL, Krishnan T, Letchumanan V, Hong KW, How KY, Lee LH, Tee KK, Yin WF, Chan KG.

Gene. 2019 Feb 5;684:58-69. doi: 10.1016/j.gene.2018.10.031. Epub 2018 Oct 12.

PMID:
30321658
7.

The role of human Metapneumovirus genetic diversity and nasopharyngeal viral load on symptom severity in adults.

Oong XY, Chook JB, Ng KT, Chow WZ, Chan KG, Hanafi NS, Pang YK, Chan YF, Kamarulzaman A, Tee KK.

Virol J. 2018 May 23;15(1):91. doi: 10.1186/s12985-018-1005-8.

8.

Novel Genetic Variants of Hepatitis B Virus in Fulminant Hepatitis.

Chook JB, Ngeow YF, Tee KK, Peh SC, Mohamed R.

J Pathog. 2017;2017:1231204. doi: 10.1155/2017/1231204. Epub 2017 Dec 19.

9.

Viral Load and Sequence Analysis Reveal the Symptom Severity, Diversity, and Transmission Clusters of Rhinovirus Infections.

Ng KT, Oong XY, Lim SH, Chook JB, Takebe Y, Chan YF, Chan KG, Hanafi NS, Pang YK, Kamarulzaman A, Tee KK.

Clin Infect Dis. 2018 Jul 2;67(2):261-268. doi: 10.1093/cid/ciy063.

PMID:
29385423
10.

Prevalence, Antimicrobial Resistance, and Genetic Diversity of Listeria spp. Isolated from Raw Chicken Meat and Chicken-Related Products in Malaysia.

Chin PS, Ang GY, Yu CY, Tan EL, Tee KK, Yin WF, Chan KG, Tan GYA.

J Food Prot. 2018 Feb;81(2):284-289. doi: 10.4315/0362-028X.JFP-17-186.

PMID:
29360399
11.

Comparative genomic and phylogenetic analysis of a toxigenic clinical isolate of Corynebacterium diphtheriae strain B-D-16-78 from Malaysia.

Hong KW, Asmah Hani AW, Nurul Aina Murni CA, Pusparani RR, Chong CK, Verasahib K, Yusoff WNW, Noordin NM, Tee KK, Yin WF, Yu CY, Ang GY, Chan KG.

Infect Genet Evol. 2017 Oct;54:263-270. doi: 10.1016/j.meegid.2017.07.015. Epub 2017 Jul 12.

PMID:
28711373
12.

Genome Sequence of a Novel HIV-1 Circulating Recombinant Form (CRF77_cpx) Identified among Blood Donors in Malaysia.

Tee KK, Bon AH, Chow WZ, Ng KT, Chan KG, Kamarulzaman A, Busch MP, Takebe Y.

Genome Announc. 2017 Jun 29;5(26). pii: e00459-17. doi: 10.1128/genomeA.00459-17.

13.

Whole-Genome Phylogenetic Analysis of Influenza B/Phuket/3073/2013-Like Viruses and Unique Reassortants Detected in Malaysia between 2012 and 2014.

Oong XY, Ng KT, Tan JL, Chan KG, Kamarulzaman A, Chan YF, Sam IC, Tee KK.

PLoS One. 2017 Jan 27;12(1):e0170610. doi: 10.1371/journal.pone.0170610. eCollection 2017.

14.

Identification and evolutionary dynamics of two novel human coronavirus OC43 genotypes associated with acute respiratory infections: phylogenetic, spatiotemporal and transmission network analyses.

Oong XY, Ng KT, Takebe Y, Ng LJ, Chan KG, Chook JB, Kamarulzaman A, Tee KK.

Emerg Microbes Infect. 2017 Jan 4;6(1):e3. doi: 10.1038/emi.2016.132.

15.

Genome Sequences of Two Multidrug-Resistant Proteus mirabilis Strains Harboring CTX-M-65 Isolated from Malaysia.

Yu CY, Ang GY, Ngeow YF, Tee KK, Yin WF, Chan KG.

Genome Announc. 2016 Nov 17;4(6). pii: e01301-16. doi: 10.1128/genomeA.01301-16.

16.
17.

Performance of a Taqman Assay for Improved Detection and Quantification of Human Rhinovirus Viral Load.

Ng KT, Chook JB, Oong XY, Chan YF, Chan KG, Hanafi NS, Pang YK, Kamarulzaman A, Tee KK.

Sci Rep. 2016 Oct 10;6:34855. doi: 10.1038/srep34855.

18.

Extensive Genetic Diversity of HIV-1 in Incident and Prevalent Infections among Malaysian Blood Donors: Multiple Introductions of HIV-1 Genotypes from Highly Prevalent Countries.

Chow WZ, Bon AH, Keating S, Anderios F, Halim HA, Takebe Y, Kamarulzaman A, Busch MP, Tee KK.

PLoS One. 2016 Aug 30;11(8):e0161853. doi: 10.1371/journal.pone.0161853. eCollection 2016.

19.

Transcriptome analysis of Pseudomonas aeruginosa PAO1 grown at both body and elevated temperatures.

Chan KG, Priya K, Chang CY, Abdul Rahman AY, Tee KK, Yin WF.

PeerJ. 2016 Jul 19;4:e2223. doi: 10.7717/peerj.2223. eCollection 2016.

20.

Genetic Characterization of a Panel of Diverse HIV-1 Isolates at Seven International Sites.

Hora B, Keating SM, Chen Y, Sanchez AM, Sabino E, Hunt G, Ledwaba J, Hackett J Jr, Swanson P, Hewlett I, Ragupathy V, Vikram Vemula S, Zeng P, Tee KK, Chow WZ, Ji H, Sandstrom P, Denny TN, Busch MP, Gao F; REDS-III and EQAPOL programs.

PLoS One. 2016 Jun 17;11(6):e0157340. doi: 10.1371/journal.pone.0157340. eCollection 2016.

21.

Genetic diversity, seasonality and transmission network of human metapneumovirus: identification of a unique sub-lineage of the fusion and attachment genes.

Chow WZ, Chan YF, Oong XY, Ng LJ, Nor'E SS, Ng KT, Chan KG, Hanafi NS, Pang YK, Kamarulzaman A, Tee KK.

Sci Rep. 2016 Jun 9;6:27730. doi: 10.1038/srep27730.

22.

Chania multitudinisentens gen. nov., sp. nov., an N-acyl-homoserine-lactone-producing bacterium in the family Enterobacteriaceae isolated from landfill site soil.

Ee R, Madhaiyan M, Ji L, Lim YL, Nor NM, Tee KK, Chen JW, Yin WF.

Int J Syst Evol Microbiol. 2016 Jun;66(6):2297-304. doi: 10.1099/ijsem.0.001025. Epub 2016 Mar 15.

PMID:
26978486
23.

Diversity and Evolutionary Histories of Human Coronaviruses NL63 and 229E Associated with Acute Upper Respiratory Tract Symptoms in Kuala Lumpur, Malaysia.

Al-Khannaq MN, Ng KT, Oong XY, Pang YK, Takebe Y, Chook JB, Hanafi NS, Kamarulzaman A, Tee KK.

Am J Trop Med Hyg. 2016 May 4;94(5):1058-64. doi: 10.4269/ajtmh.15-0810. Epub 2016 Feb 29.

24.

Molecular epidemiology and evolutionary histories of human coronavirus OC43 and HKU1 among patients with upper respiratory tract infections in Kuala Lumpur, Malaysia.

Al-Khannaq MN, Ng KT, Oong XY, Pang YK, Takebe Y, Chook JB, Hanafi NS, Kamarulzaman A, Tee KK.

Virol J. 2016 Feb 25;13:33. doi: 10.1186/s12985-016-0488-4.

25.

Complete Genome Sequence Analysis of Pandoraea pnomenusa Type Strain DSM 16536(T) Isolated from a Cystic Fibrosis Patient.

Lim YL, Ee R, Yong D, Yu CY, Ang GY, Tee KK, Yin WF, Chan KG.

Front Microbiol. 2016 Feb 8;7:109. doi: 10.3389/fmicb.2016.00109. eCollection 2016. No abstract available.

26.

Quorum sensing activity of Citrobacter amalonaticus L8A, a bacterium isolated from dental plaque.

Goh SY, Khan SA, Tee KK, Abu Kasim NH, Yin WF, Chan KG.

Sci Rep. 2016 Feb 10;6:20702. doi: 10.1038/srep20702.

27.

Streptomyces humi sp. nov., an actinobacterium isolated from soil of a mangrove forest.

Zainal N, Ser HL, Yin WF, Tee KK, Lee LH, Chan KG.

Antonie Van Leeuwenhoek. 2016 Mar;109(3):467-74. doi: 10.1007/s10482-016-0653-1. Epub 2016 Jan 19.

PMID:
26786500
28.

Complete genome sequence of Pandoraea oxalativorans DSM 23570(T), an oxalate metabolizing soil bacterium.

Chan KG, Yong D, Ee R, Lim YL, Yu CY, Tee KK, Yin WF, Ang GY.

J Biotechnol. 2016 Feb 10;219:124-5. doi: 10.1016/j.jbiotec.2015.12.037. Epub 2015 Dec 29.

PMID:
26742625
29.

HIV-1 Tat biosensor: Current development and trends for early detection strategies.

Fatin MF, Ruslinda AR, Md Arshad MK, Tee KK, Ayub RM, Hashim U, Kamarulzaman A, Gopinath SCB.

Biosens Bioelectron. 2016 Apr 15;78:358-366. doi: 10.1016/j.bios.2015.11.067. Epub 2015 Nov 25. Review.

PMID:
26655174
30.

Complete genome sequence of Pandoraea thiooxydans DSM 25325(T), a thiosulfate-oxidizing bacterium.

Yong D, Ee R, Lim YL, Yu CY, Ang GY, How KY, Tee KK, Yin WF, Chan KG.

J Biotechnol. 2016 Jan 10;217:51-2. doi: 10.1016/j.jbiotec.2015.11.009. Epub 2015 Nov 18.

PMID:
26603120
31.

Genome Sequence of Complex HIV-1 Unique Recombinant Forms Sharing a Common Recombination Breakpoint Identified in Malaysia.

Cheong HT, Ng KT, Ong LY, Takebe Y, Chan KG, Koh C, Al-Darraji HA, Kamarulzaman A, Tee KK.

Genome Announc. 2015 Nov 5;3(6). pii: e01220-15. doi: 10.1128/genomeA.01220-15.

32.

Co-infections and transmission networks of HCV, HIV-1 and HPgV among people who inject drugs.

Ng KT, Takebe Y, Chook JB, Chow WZ, Chan KG, Abed Al-Darraji HA, Kamarulzaman A, Tee KK.

Sci Rep. 2015 Oct 13;5:15198. doi: 10.1038/srep15198.

33.

Outbreaks of enterovirus D68 in Malaysia: genetic relatedness to the recent US outbreak strains.

Ng KT, Oong XY, Pang YK, Hanafi NS, Kamarulzaman A, Tee KK.

Emerg Microbes Infect. 2015 Aug;4(8):e47. doi: 10.1038/emi.2015.47. Epub 2015 Aug 5. No abstract available.

34.

Draft Genome Perspective of Staphylococcus saprophyticus Strain SU8, an N-Acyl Homoserine Lactone-Degrading Bacterium.

Chan KG, Sulaiman J, Yong DA, Tee KK, Yin WF, Priya K.

Genome Announc. 2015 Sep 24;3(5). pii: e01097-15. doi: 10.1128/genomeA.01097-15.

35.

Complete genome of Pandoraea pnomenusa RB-38, an oxalotrophic bacterium isolated from municipal solid waste landfill site.

Lim YL, Ee R, Yong D, Tee KK, Yin WF, Chan KG.

J Biotechnol. 2015 Nov 20;214:83-4. doi: 10.1016/j.jbiotec.2015.09.018. Epub 2015 Sep 21.

PMID:
26393955
36.

Complete genome sequence of Serratia fonticola DSM 4576 T, a potential plant growth promoting bacterium.

Lim YL, Yong D, Ee R, Krishnan T, Tee KK, Yin WF, Chan KG.

J Biotechnol. 2015 Nov 20;214:43-4. doi: 10.1016/j.jbiotec.2015.09.005. Epub 2015 Sep 12.

PMID:
26376471
37.

Complete genome sequencing of Pandoraea pnomenusa RB38 and Molecular Characterization of Its N-acyl homoserine lactone synthase gene ppnI.

Lim YL, Ee R, How KY, Lee SK, Yong D, Tee KK, Yin WF, Chan KG.

PeerJ. 2015 Aug 27;3:e1225. doi: 10.7717/peerj.1225. eCollection 2015.

38.

Impact of HIV-1 Subtype on the Time to CD4+ T-Cell Recovery in Combination Antiretroviral Therapy (cART)-Experienced Patients.

Chow WZ, Lim SH, Ong LY, Yong YK, Takebe Y, Kamarulzaman A, Tee KK.

PLoS One. 2015 Sep 3;10(9):e0137281. doi: 10.1371/journal.pone.0137281. eCollection 2015.

39.

Epidemiological and Evolutionary Dynamics of Influenza B Viruses in Malaysia, 2012-2014.

Oong XY, Ng KT, Lam TT, Pang YK, Chan KG, Hanafi NS, Kamarulzaman A, Tee KK.

PLoS One. 2015 Aug 27;10(8):e0136254. doi: 10.1371/journal.pone.0136254. eCollection 2015.

40.

Genetic Characterization of a Novel HIV-1 Circulating Recombinant Form (CRF74_01B) Identified among Intravenous Drug Users in Malaysia: Recombination History and Phylogenetic Linkage with Previously Defined Recombinant Lineages.

Cheong HT, Chow WZ, Takebe Y, Chook JB, Chan KG, Al-Darraji HA, Koh C, Kamarulzaman A, Tee KK.

PLoS One. 2015 Jul 21;10(7):e0133883. doi: 10.1371/journal.pone.0133883. eCollection 2015.

41.

Antibiotic Resistant and Virulence Determinants of Staphylococcus haemolyticus C10A as Revealed by Whole Genome Sequencing.

Chan KG, Ng KT, Chong TM, Pang YK, Kamarulzaman A, Yin WF, Tee KK.

J Genomics. 2015 Jun 3;3:72-4. doi: 10.7150/jgen.12574. eCollection 2015.

42.

Correction: Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis.

Rhee SY, Blanco JL, Jordan MR, Taylor J, Lemey P, Varghese V, Hamers RL, Bertagnolio S, de Wit TF, Aghokeng AF, Albert J, Avi R, Avila-Rios S, Bessong PO, Brooks JI, Boucher CA, Brumme ZL, Busch MP, Bussmann H, Chaix ML, Chin BS, D'Aquin TT, De Gascun CF, Derache A, Descamps D, Deshpande AK, Djoko CF, Eshleman SH, Fleury H, Frange P, Fujisaki S, Harrigan PR, Hattori J, Holguin A, Hunt GM, Ichimura H, Kaleebu P, Katzenstein D, Kiertiburanakul S, Kim JH, Kim SS, Li Y, Lutsar I, Morris L, Ndembi N, Kee PN, Paranjape RS, Peeters M, Poljak M, Price MA, Ragonnet-Cronin ML, Reyes-Terán G, Rolland M, Sirivichayakul S, Smith DM, Soares MA, Soriano VV, Ssemwanga D, Stanojevic M, Stefani MA, Sugiura W, Sungkanuparph S, Tanuri A, Tee KK, Truong HM, van de Vijver DA, Vidal N, Yang C, Yang R, Yebra G, Ioannidis JP, Vandamme AM, Shafer RW.

PLoS Med. 2015 Jun 1;12(6):e1001845. doi: 10.1371/journal.pmed.1001845. eCollection 2015 Jun. No abstract available.

43.

Pandoraea sp. Strain E26: Discovery of Its Quorum-Sensing Properties via Whole-Genome Sequence Analysis.

Chan KG, Yin WF, Tee KK, Chang CY, Priya K.

Genome Announc. 2015 May 28;3(3). pii: e00565-15. doi: 10.1128/genomeA.00565-15.

44.

Genome Anatomy of Streptococcus parasanguinis Strain C1A, Isolated from a Patient with Acute Exacerbation of Chronic Obstructive Pulmonary Disease, Reveals Unusual Genomic Features.

Chan KG, Ng KT, Pang YK, Chong TM, Kamarulzaman A, Yin WF, Tee KK.

Genome Announc. 2015 May 28;3(3). pii: e00541-15. doi: 10.1128/genomeA.00541-15.

45.

Complete genome sequence of Serratia multitudinisentens RB-25(T), a novel chitinolytic bacterium.

Lim YL, Yong D, Ee R, Tee KK, Yin WF, Chan KG.

J Biotechnol. 2015 Aug 10;207:32-3. doi: 10.1016/j.jbiotec.2015.04.027. Epub 2015 May 11.

PMID:
25975625
46.

Geographic and temporal trends in the molecular epidemiology and genetic mechanisms of transmitted HIV-1 drug resistance: an individual-patient- and sequence-level meta-analysis.

Rhee SY, Blanco JL, Jordan MR, Taylor J, Lemey P, Varghese V, Hamers RL, Bertagnolio S, Rinke de Wit TF, Aghokeng AF, Albert J, Avi R, Avila-Rios S, Bessong PO, Brooks JI, Boucher CA, Brumme ZL, Busch MP, Bussmann H, Chaix ML, Chin BS, D'Aquin TT, De Gascun CF, Derache A, Descamps D, Deshpande AK, Djoko CF, Eshleman SH, Fleury H, Frange P, Fujisaki S, Harrigan PR, Hattori J, Holguin A, Hunt GM, Ichimura H, Kaleebu P, Katzenstein D, Kiertiburanakul S, Kim JH, Kim SS, Li Y, Lutsar I, Morris L, Ndembi N, Ng KP, Paranjape RS, Peeters M, Poljak M, Price MA, Ragonnet-Cronin ML, Reyes-Terán G, Rolland M, Sirivichayakul S, Smith DM, Soares MA, Soriano VV, Ssemwanga D, Stanojevic M, Stefani MA, Sugiura W, Sungkanuparph S, Tanuri A, Tee KK, Truong HM, van de Vijver DA, Vidal N, Yang C, Yang R, Yebra G, Ioannidis JP, Vandamme AM, Shafer RW.

PLoS Med. 2015 Apr 7;12(4):e1001810. doi: 10.1371/journal.pmed.1001810. eCollection 2015 Apr. Erratum in: PLoS Med. 2015 Jun;12(6):e1001845.

47.

Transmission Networks of HIV-1 Among Men Who Have Sex With Men in East and Southeast Asia.

Tee KK, Kantor R, Sungkanuparph S, Takebe Y, Li P, Ditangco R, Phanuphak P, Sirisanthana T, Sim B, Ratanasuwan W, Kantipong P, Kamarulzaman A; TREAT Asia Studies to Evaluate Resistance-Monitoring (TASER-M) Database.

J Acquir Immune Defic Syndr. 2015 Sep 1;70(1):e28-30. doi: 10.1097/QAI.0000000000000614. No abstract available.

48.

Universal Primers for Detection and Sequencing of Hepatitis B Virus Genomes across Genotypes A to G.

Chook JB, Teo WL, Ngeow YF, Tee KK, Ng KP, Mohamed R.

J Clin Microbiol. 2015 Jun;53(6):1831-5. doi: 10.1128/JCM.03449-14. Epub 2015 Mar 18.

49.

Draft Genome Sequence of Aeromonas caviae Strain L12, a Quorum-Sensing Strain Isolated from a Freshwater Lake in Malaysia.

Chan KG, Chin PS, Tee KK, Chang CY, Yin WF, Sheng KY.

Genome Announc. 2015 Mar 5;3(2). pii: e00079-15. doi: 10.1128/genomeA.00079-15.

50.

Whole-Genome Analysis of Quorum-Sensing Burkholderia sp. Strain A9.

Chan KG, Chen JW, Tee KK, Chang CY, Yin WF, Chan XY.

Genome Announc. 2015 Mar 5;3(2). pii: e00063-15. doi: 10.1128/genomeA.00063-15.

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