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Items: 1 to 50 of 235

1.

Transdermal fluorescence detection of a dual fluorophore system for noninvasive point-of-care gastrointestinal permeability measurement.

Dorshow RB, Johnson JR, Debreczeny MP, Riley IR, Shieh JJ, Rogers TE, Hall-Moore C, Shaikh N, Rouggly-Nickless LC, Tarr PI.

Biomed Opt Express. 2019 Sep 13;10(10):5103-5116. doi: 10.1364/BOE.10.005103. eCollection 2019 Oct 1.

2.

Contribution and Interaction of Shiga Toxin Genes to Escherichia coli O157:H7 Virulence.

Tarr GAM, Stokowski T, Shringi S, Tarr PI, Freedman SB, Oltean HN, Rabinowitz PM, Chui L.

Toxins (Basel). 2019 Oct 18;11(10). pii: E607. doi: 10.3390/toxins11100607.

3.

Importance of case age in the purported association between phylogenetics and hemolytic uremic syndrome in Escherichia coli O157:H7 infections - ERRATUM.

Tarr GAM, Shringi S, Oltean HN, Mayer J, Rabinowitz P, Wakefield J, Tarr PI, Besser TE, Phipps AI.

Epidemiol Infect. 2019 Oct 21;147:e290. doi: 10.1017/S095026881900178X. No abstract available.

4.

Persistent metagenomic signatures of early-life hospitalization and antibiotic treatment in the infant gut microbiota and resistome.

Gasparrini AJ, Wang B, Sun X, Kennedy EA, Hernandez-Leyva A, Ndao IM, Tarr PI, Warner BB, Dantas G.

Nat Microbiol. 2019 Sep 9. doi: 10.1038/s41564-019-0550-2. [Epub ahead of print]

PMID:
31501537
5.

Clinical interpretation of enteric molecular diagnostic tests.

Tarr GAM, Tarr PI, Freedman SB.

Clin Microbiol Infect. 2019 Sep 3. pii: S1198-743X(19)30479-3. doi: 10.1016/j.cmi.2019.08.018. [Epub ahead of print] No abstract available.

PMID:
31491461
6.

Letter: Lactobacillus rhamnosus GG offers no benefit over placebo in children with acute gastroenteritis.

Schnadower D, Tarr PI, Freedman SB.

Aliment Pharmacol Ther. 2019 Sep;50(5):620-622. doi: 10.1111/apt.15418. No abstract available.

PMID:
31414542
7.

Undifferentiated Abdominal Pain in Children Presenting to the Pediatric Emergency Department.

Harris BR, Chinta SS, Colvin R, Schnadower D, Tarr PI, Sayuk GS.

Clin Pediatr (Phila). 2019 Oct;58(11-12):1212-1223. doi: 10.1177/0009922819867459. Epub 2019 Aug 6.

PMID:
31387380
8.

Epithelial Indoleamine 2,3-Dioxygenase 1 Modulates Aryl Hydrocarbon Receptor and Notch Signaling to Increase Differentiation of Secretory Cells and Alter Mucus-Associated Microbiota.

Alvarado DM, Chen B, Iticovici M, Thaker AI, Dai N, VanDussen KL, Shaikh N, Lim CK, Guillemin GJ, Tarr PI, Ciorba MA.

Gastroenterology. 2019 Oct;157(4):1093-1108.e11. doi: 10.1053/j.gastro.2019.07.013. Epub 2019 Jul 17.

PMID:
31325428
9.

Transcriptomic analysis of enteropathy in Zambian children with severe acute malnutrition.

Chama M, Amadi BC, Chandwe K, Zyambo K, Besa E, Shaikh N, Ndao IM, Tarr PI, Storer C, Head R, Kelly P.

EBioMedicine. 2019 Jul;45:456-463. doi: 10.1016/j.ebiom.2019.06.015. Epub 2019 Jun 20.

10.

Predicting Hemolytic Uremic Syndrome and Renal Failure in Shiga Toxin-Producing Escherichia coli Infected Children.

McKee RS, Schnadower D, Tarr PI, Xie J, Finkelstein Y, Desai N, Lane RD, Bergmann KR, Kaplan RL, Hariharan S, Cruz AT, Cohen DM, Dixon A, Ramgopal S, Rominger A, Powell EC, Kilgar J, Michelson KA, Beer D, Bitzan M, Pruitt CM, Yen K, Meckler GD, Plint AC, Bradin S, Abramo TJ, Gouin S, Kam AJ, Schuh A, Balamuth F, Hunley TE, Kanegaye JT, Jones NE, Avva U, Porter R, Fein DM, Louie JP, Freedman SB; Pediatric Emergency Medicine Collaborative Research Committee (PEMCRC); Pediatric Emergency Research Canada (PERC).

Clin Infect Dis. 2019 May 24. pii: ciz432. doi: 10.1093/cid/ciz432. [Epub ahead of print]

PMID:
31125419
11.

Lactobacillus for Gastroenteritis in Children. Reply.

Schnadower D, Tarr PI, Freedman SB.

N Engl J Med. 2019 May 9;380(19):e36. doi: 10.1056/NEJMc1900909. No abstract available.

PMID:
31067399
12.

Impaired Chylomicron Assembly Modifies Hepatic Metabolism Through Bile Acid-Dependent and Transmissible Microbial Adaptations.

Xie Y, Matsumoto H, Kennedy S, Newberry EP, Moritz W, DeBosch BJ, Moley KH, Rubin DC, Warner BW, Kau AL, Tarr PI, Wylie TN, Wylie KM, Davidson NO.

Hepatology. 2019 Oct;70(4):1168-1184. doi: 10.1002/hep.30669. Epub 2019 May 23.

PMID:
31004524
13.

Comparative Evaluation of Enteric Bacterial Culture and a Molecular Multiplex Syndromic Panel in Children with Acute Gastroenteritis.

Kellner T, Parsons B, Chui L, Berenger BM, Xie J, Burnham CA, Tarr PI, Lee BE, Nettel-Aguirre A, Szelewicki J, Vanderkooi OG, Pang XL, Zelyas N, Freedman SB.

J Clin Microbiol. 2019 May 24;57(6). pii: e00205-19. doi: 10.1128/JCM.00205-19. Print 2019 Jun.

PMID:
30971465
14.

Pigment Visibility on Rectal Swabs Used To Detect Enteropathogens: a Prospective Cohort Study.

Xie J, Tarr GAM, Ali S, Chui L, Pang XL, Lee BE, Vanderkooi OG, Tarr PI, Zhuo R, Parsons B, Berenger BM, Kim K, Freedman SB.

J Clin Microbiol. 2019 May 24;57(6). pii: e00213-19. doi: 10.1128/JCM.00213-19. Print 2019 Jun.

PMID:
30944189
15.

Performance of commercial tests for molecular detection of Shiga toxin-producing Escherichia coli (STEC): a systematic review and meta-analysis protocol.

Tarr GAM, Lin CY, Lorenzetti D, Chui L, Tarr PI, Hartling L, Vandermeer B, Freedman SB.

BMJ Open. 2019 Mar 7;9(3):e025950. doi: 10.1136/bmjopen-2018-025950.

16.

Performance of Stool-testing Recommendations for Acute Gastroenteritis When Used to Identify Children With 9 Potential Bacterial Enteropathogens.

Tarr GAM, Chui L, Lee BE, Pang XL, Ali S, Nettel-Aguirre A, Vanderkooi OG, Berenger BM, Dickinson J, Tarr PI, Drews S, MacDonald J, Kim K, Freedman SB.

Clin Infect Dis. 2019 Sep 13;69(7):1173-1182. doi: 10.1093/cid/ciy1021.

PMID:
30517612
17.

Case definitions of hemolytic uremic syndrome following Escherichia coli O157:H7 infection vary in validity.

Tarr GAM, Oltean HN, Phipps AI, Rabinowitz P, Tarr PI.

Int J Med Microbiol. 2018 Dec;308(8):1121-1127. doi: 10.1016/j.ijmm.2018.10.002. Epub 2018 Oct 10.

PMID:
30466555
18.

Lactobacillus rhamnosus GG versus Placebo for Acute Gastroenteritis in Children.

Schnadower D, Tarr PI, Casper TC, Gorelick MH, Dean JM, O'Connell KJ, Mahajan P, Levine AC, Bhatt SR, Roskind CG, Powell EC, Rogers AJ, Vance C, Sapien RE, Olsen CS, Metheney M, Dickey VP, Hall-Moore C, Freedman SB.

N Engl J Med. 2018 Nov 22;379(21):2002-2014. doi: 10.1056/NEJMoa1802598.

19.

Infant diet and maternal gestational weight gain predict early metabolic maturation of gut microbiomes.

Baumann-Dudenhoeffer AM, D'Souza AW, Tarr PI, Warner BB, Dantas G.

Nat Med. 2018 Dec;24(12):1822-1829. doi: 10.1038/s41591-018-0216-2. Epub 2018 Oct 29.

20.

Diagnostic Interpretation Guidance for Pediatric Enteric Pathogens: A Modified Delphi Consensus Process.

Stang AS, Trudeau M, Vanderkooi OG, Lee BE, Chui L, Pang XL, Allen V, Burnham CD, Goldfarb DM, MacDonald J, Parsons B, Petrich A, Pollari F, Tarr PI, Tipples G, Zhuo R, Freedman SB.

Can J Infect Dis Med Microbiol. 2018 Sep 27;2018:2589826. doi: 10.1155/2018/2589826. eCollection 2018.

21.

Multiplex Nucleic Acid Amplification Testing to Diagnose Gut Infections: Challenges, Opportunities, and Result Interpretation.

Anderson NW, Tarr PI.

Gastroenterol Clin North Am. 2018 Dec;47(4):793-812. doi: 10.1016/j.gtc.2018.07.006. Epub 2018 Sep 29. Review.

PMID:
30337033
22.

Strength of the association between antibiotic use and hemolytic uremic syndrome following Escherichia coli O157:H7 infection varies with case definition.

Tarr GAM, Oltean HN, Phipps AI, Rabinowitz P, Tarr PI.

Int J Med Microbiol. 2018 Oct;308(7):921-926. doi: 10.1016/j.ijmm.2018.06.009. Epub 2018 Jun 26.

23.

Gut Sphingolipid Composition as a Prelude to Necrotizing Enterocolitis.

Rusconi B, Jiang X, Sidhu R, Ory DS, Warner BB, Tarr PI.

Sci Rep. 2018 Jul 20;8(1):10984. doi: 10.1038/s41598-018-28862-4.

24.

Relationship between enteric pathogens and acute gastroenteritis disease severity: a prospective cohort study.

Xie J, Nettel-Aguirre A, Lee BE, Chui L, Pang XL, Zhuo R, Parsons B, Vanderkooi OG, Tarr PI, Ali S, Dickinson JA, Hagen E, Svenson LW, MacDonald SE, Drews SJ, Tellier R, Graham T, Lavoie M, MacDonald J, Freedman SB; Pediatric Emergency Research Canada (PERC) and the Alberta Provincial Pediatric EnTeric Infection TEam (APPETITE Team).

Clin Microbiol Infect. 2019 Apr;25(4):454-461. doi: 10.1016/j.cmi.2018.06.016. Epub 2018 Jun 28.

PMID:
29964235
25.

Importance of case age in the purported association between phylogenetics and hemolytic uremic syndrome in Escherichia coli O157:H7 infections.

Tarr GAM, Shringi S, Oltean HN, Mayer J, Rabinowitz P, Wakefield J, Tarr PI, Besser TE, Phipps AI.

Epidemiol Infect. 2018 Sep;146(12):1550-1555. doi: 10.1017/S0950268818001632. Epub 2018 Jun 19. Erratum in: Epidemiol Infect. 2019 Oct 21;147:e290.

26.

Clinical and Laboratory Predictors of Shiga Toxin-Producing Escherichia coli Infection in Children With Bloody Diarrhea.

McKee RS, Tarr PI, Dietzen DJ, Chawla R, Schnadower D.

J Pediatric Infect Dis Soc. 2018 Aug 17;7(3):e116-e122. doi: 10.1093/jpids/piy025.

27.

Carriage of Cronobacter sakazakii in the Very Preterm Infant Gut.

Chandrasekaran S, Burnham CD, Warner BB, Tarr PI, Wylie TN.

Clin Infect Dis. 2018 Jul 2;67(2):269-274. doi: 10.1093/cid/ciy062.

28.

Geogenomic Segregation and Temporal Trends of Human Pathogenic Escherichia coli O157:H7, Washington, USA, 2005-20141.

Tarr GAM, Shringi S, Phipps AI, Besser TE, Mayer J, Oltean HN, Wakefield J, Tarr PI, Rabinowitz P.

Emerg Infect Dis. 2018 Jan;24(1):32-39. doi: 10.3201/eid2401.170851.

29.

Microbial antigen encounter during a preweaning interval is critical for tolerance to gut bacteria.

Knoop KA, Gustafsson JK, McDonald KG, Kulkarni DH, Coughlin PE, McCrate S, Kim D, Hsieh CS, Hogan SP, Elson CO, Tarr PI, Newberry RD.

Sci Immunol. 2017 Dec 15;2(18). pii: eaao1314. doi: 10.1126/sciimmunol.aao1314.

30.

2017 Infectious Diseases Society of America Clinical Practice Guidelines for the Diagnosis and Management of Infectious Diarrhea.

Shane AL, Mody RK, Crump JA, Tarr PI, Steiner TS, Kotloff K, Langley JM, Wanke C, Warren CA, Cheng AC, Cantey J, Pickering LK.

Clin Infect Dis. 2017 Nov 29;65(12):1963-1973. doi: 10.1093/cid/cix959.

31.

2017 Infectious Diseases Society of America Clinical Practice Guidelines for the Diagnosis and Management of Infectious Diarrhea.

Shane AL, Mody RK, Crump JA, Tarr PI, Steiner TS, Kotloff K, Langley JM, Wanke C, Warren CA, Cheng AC, Cantey J, Pickering LK.

Clin Infect Dis. 2017 Nov 29;65(12):e45-e80. doi: 10.1093/cid/cix669.

32.

Environmental Enteric Dysfunction: A Case Definition for Intervention Trials.

Denno DM, Tarr PI, Nataro JP.

Am J Trop Med Hyg. 2017 Dec;97(6):1643-1646. doi: 10.4269/ajtmh.17-0183. Epub 2017 Sep 21. No abstract available.

33.

Re: Fruit Juice and Child Health.

Freedman SB, Tarr PI, Mahajan P.

Pediatrics. 2017 Oct;140(4). pii: e20172301A. doi: 10.1542/peds.2017-2301A. No abstract available.

34.

Randomised controlled trial of Lactobacillus rhamnosus (LGG) versus placebo in children presenting to the emergency department with acute gastroenteritis: the PECARN probiotic study protocol.

Schnadower D, Tarr PI, Casper TC, Gorelick MH, Dean MJ, O'Connell KJ, Mahajan P, Chun TH, Bhatt SR, Roskind CG, Powell EC, Rogers AJ, Vance C, Sapien RE, Gao F, Freedman SB.

BMJ Open. 2017 Sep 24;7(9):e018115. doi: 10.1136/bmjopen-2017-018115.

35.

Serologic Evidence of Gut-driven Systemic Inflammation in Juvenile Idiopathic Arthritis.

Fotis L, Shaikh N, Baszis KW, Samson CM, Lev-Tzion R, French AR, Tarr PI.

J Rheumatol. 2017 Nov;44(11):1624-1631. doi: 10.3899/jrheum.161589. Epub 2017 Sep 15.

36.

Measurement of gut permeability using fluorescent tracer agent technology.

Dorshow RB, Hall-Moore C, Shaikh N, Talcott MR, Faubion WA, Rogers TE, Shieh JJ, Debreczeny MP, Johnson JR, Dyer RB, Singh RJ, Tarr PI.

Sci Rep. 2017 Sep 7;7(1):10888. doi: 10.1038/s41598-017-09971-y.

37.

Impaired Barrier Function and Autoantibody Generation in Malnutrition Enteropathy in Zambia.

Amadi B, Besa E, Zyambo K, Kaonga P, Louis-Auguste J, Chandwe K, Tarr PI, Denno DM, Nataro JP, Faubion W, Sailer A, Yeruva S, Brantner T, Murray J, Prendergast AJ, Turner JR, Kelly P.

EBioMedicine. 2017 Aug;22:191-199. doi: 10.1016/j.ebiom.2017.07.017. Epub 2017 Jul 19.

38.

Enteropathogen detection in children with diarrhoea, or vomiting, or both, comparing rectal flocked swabs with stool specimens: an outpatient cohort study.

Freedman SB, Xie J, Nettel-Aguirre A, Lee B, Chui L, Pang XL, Zhuo R, Parsons B, Dickinson JA, Vanderkooi OG, Ali S, Osterreicher L, Lowerison K, Tarr PI; Alberta Provincial Pediatric EnTeric Infection TEam (APPETITE).

Lancet Gastroenterol Hepatol. 2017 Sep;2(9):662-669. doi: 10.1016/S2468-1253(17)30160-7. Epub 2017 Jul 14.

39.

Early pregnancy vaginal microbiome trends and preterm birth.

Stout MJ, Zhou Y, Wylie KM, Tarr PI, Macones GA, Tuuli MG.

Am J Obstet Gynecol. 2017 Sep;217(3):356.e1-356.e18. doi: 10.1016/j.ajog.2017.05.030. Epub 2017 May 23.

40.

Independence of gut bacterial content and neonatal necrotizing enterocolitis severity.

Barron LK, Warner BB, Tarr PI, Shannon WD, Deych E, Warner BW.

J Pediatr Surg. 2017 Jun;52(6):993-998. doi: 10.1016/j.jpedsurg.2017.03.029. Epub 2017 Apr 5.

41.

Intestinal dysbiosis in preterm infants preceding necrotizing enterocolitis: a systematic review and meta-analysis.

Pammi M, Cope J, Tarr PI, Warner BB, Morrow AL, Mai V, Gregory KE, Kroll JS, McMurtry V, Ferris MJ, Engstrand L, Lilja HE, Hollister EB, Versalovic J, Neu J.

Microbiome. 2017 Mar 9;5(1):31. doi: 10.1186/s40168-017-0248-8. Review.

42.

Case-Control Assessment of the Roles of Noroviruses, Human Bocaviruses 2, 3, and 4, and Novel Polyomaviruses and Astroviruses in Acute Childhood Diarrhea.

Melamed R, Storch GA, Holtz LR, Klein EJ, Herrin B, Tarr PI, Denno DM.

J Pediatric Infect Dis Soc. 2017 Sep 1;6(3):e49-e54. doi: 10.1093/jpids/piw083.

43.

Environmental Enteric Dysfunction and the Fecal Microbiota in Malawian Children.

Ordiz MI, Stephenson K, Agapova S, Wylie KM, Maleta K, Martin J, Trehan I, Tarr PI, Manary MJ.

Am J Trop Med Hyg. 2017 Feb 8;96(2):473-476. doi: 10.4269/ajtmh.16-0617. Epub 2016 Dec 12.

44.

Associations Between Hydration Status, Intravenous Fluid Administration, and Outcomes of Patients Infected With Shiga Toxin-Producing Escherichia coli: A Systematic Review and Meta-analysis.

Grisaru S, Xie J, Samuel S, Hartling L, Tarr PI, Schnadower D, Freedman SB; Alberta Provincial Pediatric Enteric Infection Team.

JAMA Pediatr. 2017 Jan 1;171(1):68-76. doi: 10.1001/jamapediatrics.2016.2952. Review.

PMID:
27893870
45.

Environmental Enteric Dysfunction Is Associated With Poor Linear Growth and Can Be Identified by Host Fecal mRNAs.

Ordiz MI, Shaikh N, Trehan I, Maleta K, Stauber J, Shulman R, Devaraj S, Tarr PI, Manary MJ.

J Pediatr Gastroenterol Nutr. 2016 Nov;63(5):453-459.

46.

Developmental dynamics of the preterm infant gut microbiota and antibiotic resistome.

Gibson MK, Wang B, Ahmadi S, Burnham CA, Tarr PI, Warner BB, Dantas G.

Nat Microbiol. 2016 Mar 7;1:16024. doi: 10.1038/nmicrobiol.2016.24.

47.

Antibiotic perturbation of the preterm infant gut microbiome and resistome.

Gasparrini AJ, Crofts TS, Gibson MK, Tarr PI, Warner BB, Dantas G.

Gut Microbes. 2016 Sep 2;7(5):443-9. doi: 10.1080/19490976.2016.1218584. Epub 2016 Jul 29. Review.

48.

Whole Genome Sequencing for Genomics-Guided Investigations of Escherichia coli O157:H7 Outbreaks.

Rusconi B, Sanjar F, Koenig SS, Mammel MK, Tarr PI, Eppinger M.

Front Microbiol. 2016 Jun 30;7:985. doi: 10.3389/fmicb.2016.00985. eCollection 2016.

49.

Gut bacteria and late-onset neonatal bloodstream infections in preterm infants.

Tarr PI, Warner BB.

Semin Fetal Neonatal Med. 2016 Dec;21(6):388-393. doi: 10.1016/j.siny.2016.06.002. Epub 2016 Jun 23. Review.

PMID:
27345372
50.

Necrotizing enterocolitis and preterm infant gut bacteria.

Warner BB, Tarr PI.

Semin Fetal Neonatal Med. 2016 Dec;21(6):394-399. doi: 10.1016/j.siny.2016.06.001. Epub 2016 Jun 22. Review.

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