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Items: 1 to 50 of 286

1.

Glucose dehydrogenase gene containing phosphobacteria for biofortification of Phosphorus with growth promotion of rice.

Rasul M, Yasmin S, Suleman M, Zaheer A, Reitz T, Tarkka MT, Islam E, Mirza MS.

Microbiol Res. 2019 Jun - Aug;223-225:1-12. doi: 10.1016/j.micres.2019.03.004. Epub 2019 Mar 22.

PMID:
31178042
2.

Collembola interact with mycorrhizal fungi in modifying oak morphology, C and N incorporation and transcriptomics.

Graf M, Bönn M, Feldhahn L, Kurth F, Grams TEE, Herrmann S, Tarkka M, Buscot F, Scheu S.

R Soc Open Sci. 2019 Mar 6;6(3):181869. doi: 10.1098/rsos.181869. eCollection 2019 Mar.

3.

Tree Response to Herbivory Is Affected by Endogenous Rhythmic Growth and Attenuated by Cotreatment With a Mycorrhizal Fungus.

Bacht M, Tarkka MT, López IF, Bönn M, Brandl R, Buscot F, Feldhahn L, Grams TEE, Herrmann S, Schädler M.

Mol Plant Microbe Interact. 2019 Jun;32(6):770-781. doi: 10.1094/MPMI-10-18-0290-R. Epub 2019 Jul 7.

PMID:
30753106
4.

DRomics: A Turnkey Tool to Support the Use of the Dose-Response Framework for Omics Data in Ecological Risk Assessment.

Larras F, Billoir E, Baillard V, Siberchicot A, Scholz S, Wubet T, Tarkka M, Schmitt-Jansen M, Delignette-Muller ML.

Environ Sci Technol. 2018 Dec 18;52(24):14461-14468. doi: 10.1021/acs.est.8b04752. Epub 2018 Dec 4.

PMID:
30444611
5.

Seeds with low phosphorus content: not so bad after all?

Vetterlein D, Tarkka M.

J Exp Bot. 2018 Oct 12;69(21):4993-4996. doi: 10.1093/jxb/ery313. No abstract available.

6.

Growing Research Networks on Mycorrhizae for Mutual Benefits.

Ferlian O, Biere A, Bonfante P, Buscot F, Eisenhauer N, Fernandez I, Hause B, Herrmann S, Krajinski-Barth F, Meier IC, Pozo MJ, Rasmann S, Rillig MC, Tarkka MT, van Dam NM, Wagg C, Martinez-Medina A.

Trends Plant Sci. 2018 Nov;23(11):975-984. doi: 10.1016/j.tplants.2018.08.008. Epub 2018 Sep 18. Review.

7.

Mycorrhizal microbiomes.

Tarkka MT, Drigo B, Deveau A.

Mycorrhiza. 2018 Aug;28(5-6):403-409. doi: 10.1007/s00572-018-0865-5. Review.

PMID:
30206704
8.

Oak genome reveals facets of long lifespan.

Plomion C, Aury JM, Amselem J, Leroy T, Murat F, Duplessis S, Faye S, Francillonne N, Labadie K, Le Provost G, Lesur I, Bartholomé J, Faivre-Rampant P, Kohler A, Leplé JC, Chantret N, Chen J, Diévart A, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Bogeat-Triboulot MB, Bouffaud ML, Brachi B, Chancerel E, Cohen D, Couloux A, Da Silva C, Dossat C, Ehrenmann F, Gaspin C, Grima-Pettenati J, Guichoux E, Hecker A, Herrmann S, Hugueney P, Hummel I, Klopp C, Lalanne C, Lascoux M, Lasserre E, Lemainque A, Desprez-Loustau ML, Luyten I, Madoui MA, Mangenot S, Marchal C, Maumus F, Mercier J, Michotey C, Panaud O, Picault N, Rouhier N, Rué O, Rustenholz C, Salin F, Soler M, Tarkka M, Velt A, Zanne AE, Martin F, Wincker P, Quesneville H, Kremer A, Salse J.

Nat Plants. 2018 Jul;4(7):440-452. doi: 10.1038/s41477-018-0172-3. Epub 2018 Jun 18.

9.

Aprotinin Impacts 8-Isoprostane after Coronary Artery Bypass Grafting.

Toikkanen V, Rinne T, Nieminen R, Moilanen E, Laurikka J, Porkkala H, Tarkka M, Mennander AA.

Scand J Surg. 2018 Dec;107(4):329-335. doi: 10.1177/1457496918766720. Epub 2018 Apr 9.

PMID:
29628009
10.

Pulmonary vascular resistance index during coronary artery bypass surgery with aprotinin.

Toikkanen V, Rinne T, Laurikka J, Porkkala H, Tarkka M, Mennander A.

Scand J Clin Lab Invest. 2017 Sep;77(5):315-320. doi: 10.1080/00365513.2017.1318446. Epub 2017 May 2.

PMID:
28460544
11.

Transcriptome analysis in oak uncovers a strong impact of endogenous rhythmic growth on the interaction with plant-parasitic nematodes.

Maboreke HR, Feldhahn L, Bönn M, Tarkka MT, Buscot F, Herrmann S, Menzel R, Ruess L.

BMC Genomics. 2016 Aug 12;17(1):627. doi: 10.1186/s12864-016-2992-8.

12.

The Impact of Lung Ventilation on Some Cytokines after Coronary Artery Bypass Grafting.

Toikkanen V, Rinne T, Nieminen R, Moilanen E, Laurikka J, Porkkala H, Tarkka M, Mennander A.

Scand J Surg. 2017 Mar;106(1):87-93. doi: 10.1177/1457496916641340. Epub 2016 Jul 8.

PMID:
27033552
13.

Obesity paradox disappears in coronary artery bypass graft patients during 20-year follow-up.

Hällberg V, Kataja M, Lahtela J, Tarkka M, Inamaa T, Palomäki A; W-CABG Study Group.

Eur Heart J Acute Cardiovasc Care. 2017 Dec;6(8):771-777. doi: 10.1177/2048872616633844. Epub 2016 Feb 24.

PMID:
26912911
14.

Large scale transcriptome analysis reveals interplay between development of forest trees and a beneficial mycorrhiza helper bacterium.

Kurth F, Feldhahn L, Bönn M, Herrmann S, Buscot F, Tarkka MT.

BMC Genomics. 2015 Sep 2;16:658. doi: 10.1186/s12864-015-1856-y.

15.

Endogenous rhythmic growth in oak trees is regulated by internal clocks rather than resource availability.

Herrmann S, Recht S, Boenn M, Feldhahn L, Angay O, Fleischmann F, Tarkka MT, Grams TE, Buscot F.

J Exp Bot. 2015 Dec;66(22):7113-27. doi: 10.1093/jxb/erv408. Epub 2015 Aug 28.

16.

Symptoms of Sternal Nonunion Late after Cardiac Surgery.

Hautalahti J, Rinta-Kiikka I, Tarkka M, Laurikka J.

Thorac Cardiovasc Surg. 2017 Jun;65(4):325-331. doi: 10.1055/s-0035-1549360. Epub 2015 Apr 24.

PMID:
25910220
17.

Draft Genome Sequence of Streptomyces sp. Strain 150FB, a Mushroom Mycoparasite Antagonist.

Tarkka MT, Feldhahn L, Krüger D, Arnold N, Buscot F, Wubet T.

Genome Announc. 2015 Apr 2;3(2). pii: e01441-14. doi: 10.1128/genomeA.01441-14.

18.

Genome Sequence of the Mycorrhiza Helper Bacterium Streptomyces sp. Strain AcH 505.

Tarkka MT, Feldhahn L, Buscot F, Wubet T.

Genome Announc. 2015 Apr 2;3(2). pii: e01386-14. doi: 10.1128/genomeA.01386-14.

19.

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release.

Lesur I, Le Provost G, Bento P, Da Silva C, Leplé JC, Murat F, Ueno S, Bartholomé J, Lalanne C, Ehrenmann F, Noirot C, Burban C, Léger V, Amselem J, Belser C, Quesneville H, Stierschneider M, Fluch S, Feldhahn L, Tarkka M, Herrmann S, Buscot F, Klopp C, Kremer A, Salse J, Aury JM, Plomion C.

BMC Genomics. 2015 Feb 21;16:112. doi: 10.1186/s12864-015-1331-9.

20.

Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists.

Kohler A, Kuo A, Nagy LG, Morin E, Barry KW, Buscot F, Canbäck B, Choi C, Cichocki N, Clum A, Colpaert J, Copeland A, Costa MD, Doré J, Floudas D, Gay G, Girlanda M, Henrissat B, Herrmann S, Hess J, Högberg N, Johansson T, Khouja HR, LaButti K, Lahrmann U, Levasseur A, Lindquist EA, Lipzen A, Marmeisse R, Martino E, Murat C, Ngan CY, Nehls U, Plett JM, Pringle A, Ohm RA, Perotto S, Peter M, Riley R, Rineau F, Ruytinx J, Salamov A, Shah F, Sun H, Tarkka M, Tritt A, Veneault-Fourrey C, Zuccaro A; Mycorrhizal Genomics Initiative Consortium, Tunlid A, Grigoriev IV, Hibbett DS, Martin F.

Nat Genet. 2015 Apr;47(4):410-5. doi: 10.1038/ng.3223. Epub 2015 Feb 23.

21.

Insights into organohalide respiration and the versatile catabolism of Sulfurospirillum multivorans gained from comparative genomics and physiological studies.

Goris T, Schubert T, Gadkari J, Wubet T, Tarkka M, Buscot F, Adrian L, Diekert G.

Environ Microbiol. 2014 Nov;16(11):3562-80. doi: 10.1111/1462-2920.12589. Epub 2014 Sep 3.

PMID:
25186071
22.

Streptomyces-induced resistance against oak powdery mildew involves host plant responses in defense, photosynthesis, and secondary metabolism pathways.

Kurth F, Mailänder S, Bönn M, Feldhahn L, Herrmann S, Große I, Buscot F, Schrey SD, Tarkka MT.

Mol Plant Microbe Interact. 2014 Sep;27(9):891-900. doi: 10.1094/MPMI-10-13-0296-R.

23.

Upstream Transcription Factor 1 (USF1) allelic variants regulate lipoprotein metabolism in women and USF1 expression in atherosclerotic plaque.

Fan YM, Hernesniemi J, Oksala N, Levula M, Raitoharju E, Collings A, Hutri-Kähönen N, Juonala M, Marniemi J, Lyytikäinen LP, Seppälä I, Mennander A, Tarkka M, Kangas AJ, Soininen P, Salenius JP, Klopp N, Illig T, Laitinen T, Ala-Korpela M, Laaksonen R, Viikari J, Kähönen M, Raitakari OT, Lehtimäki T.

Sci Rep. 2014 Apr 11;4:4650. doi: 10.1038/srep04650.

24.

Adipocytokine resistin correlates with oxidative stress and myocardial injury in patients undergoing cardiac surgery.

Laurikka A, Vuolteenaho K, Toikkanen V, Rinne T, Leppänen T, Tarkka M, Laurikka J, Moilanen E.

Eur J Cardiothorac Surg. 2014 Oct;46(4):729-36. doi: 10.1093/ejcts/ezt634. Epub 2014 Jan 30.

PMID:
24482385
25.

Associations of metabolic syndrome and diabetes mellitus with 16-year survival after CABG.

Hällberg V, Palomäki A, Lahtela J, Voutilainen S, Tarkka M, Kataja M; Study Group (W-CABG).

Cardiovasc Diabetol. 2014 Jan 22;13:25. doi: 10.1186/1475-2840-13-25.

26.

Confined ischemia may improve remote myocardial outcome after rat cardiac arrest.

Wang Z, Li H, Vuohelainen V, Tenhunen J, Hämäläinen M, Rinne T, Moilanen E, Paavonen T, Tarkka M, Mennander A.

Scand J Clin Lab Invest. 2014 Jan;74(1):27-36. doi: 10.3109/00365513.2013.855944. Epub 2013 Nov 22.

PMID:
24266783
27.

Cardiopulmonary bypass decreases pulmonary vascular resistance index after coronary artery bypass surgery.

Toikkanen V, Rinne T, Huhtala H, Laurikka J, Porkkala H, Tarkka M, Mennander A.

Scand J Clin Lab Invest. 2014 Jan;74(1):37-43. doi: 10.3109/00365513.2013.856032. Epub 2013 Nov 22.

PMID:
24266780
28.

Detection and quantification of a mycorrhization helper bacterium and a mycorrhizal fungus in plant-soil microcosms at different levels of complexity.

Kurth F, Zeitler K, Feldhahn L, Neu TR, Weber T, Krištůfek V, Wubet T, Herrmann S, Buscot F, Tarkka MT.

BMC Microbiol. 2013 Sep 11;13:205. doi: 10.1186/1471-2180-13-205.

29.

A 12-year follow-up on the changes in health-related quality of life after coronary artery bypass graft surgery.

Hokkanen M, Järvinen O, Huhtala H, Tarkka MR.

Eur J Cardiothorac Surg. 2014 Feb;45(2):329-34. doi: 10.1093/ejcts/ezt358. Epub 2013 Jul 9.

PMID:
23842894
30.

OakContigDF159.1, a reference library for studying differential gene expression in Quercus robur during controlled biotic interactions: use for quantitative transcriptomic profiling of oak roots in ectomycorrhizal symbiosis.

Tarkka MT, Herrmann S, Wubet T, Feldhahn L, Recht S, Kurth F, Mailänder S, Bönn M, Neef M, Angay O, Bacht M, Graf M, Maboreke H, Fleischmann F, Grams TE, Ruess L, Schädler M, Brandl R, Scheu S, Schrey SD, Grosse I, Buscot F.

New Phytol. 2013 Jul;199(2):529-40. doi: 10.1111/nph.12317. Epub 2013 May 15.

31.

Genome sequences of two dehalogenation specialists – Dehalococcoides mccartyi strains BTF08 and DCMB5 enriched from the highly polluted Bitterfeld region.

Pöritz M, Goris T, Wubet T, Tarkka MT, Buscot F, Nijenhuis I, Lechner U, Adrian L.

FEMS Microbiol Lett. 2013 Jun;343(2):101-4.

32.

Genome-wide association study pinpoints a new functional apolipoprotein B variant influencing oxidized low-density lipoprotein levels but not cardiovascular events: AtheroRemo Consortium.

Mäkelä KM, Seppälä I, Hernesniemi JA, Lyytikäinen LP, Oksala N, Kleber ME, Scharnagl H, Grammer TB, Baumert J, Thorand B, Jula A, Hutri-Kähönen N, Juonala M, Laitinen T, Laaksonen R, Karhunen PJ, Nikus KC, Nieminen T, Laurikka J, Kuukasjärvi P, Tarkka M, Viik J, Klopp N, Illig T, Kettunen J, Ahotupa M, Viikari JS, Kähönen M, Raitakari OT, Karakas M, Koenig W, Boehm BO, Winkelmann BR, März W, Lehtimäki T.

Circ Cardiovasc Genet. 2013 Feb;6(1):73-81. doi: 10.1161/CIRCGENETICS.112.964965. Epub 2012 Dec 17.

PMID:
23247145
33.

Immunoglobulin G4-positive ascending thoracic aortitis may be prone to dissection.

Kajander H, Paavonen T, Valo T, Tarkka M, Mennander AA.

J Thorac Cardiovasc Surg. 2013 Dec;146(6):1449-55. doi: 10.1016/j.jtcvs.2012.09.039. Epub 2012 Oct 9.

34.

Sildenafil after cardiac arrest and infarction; an experimental rat model.

Mennander AA, Vuohelainen V, Aanismaa RS, Narkilahti S, Paavonen T, Tarkka M.

Scand Cardiovasc J Suppl. 2013 Feb;47(1):58-64. doi: 10.3109/14017431.2012.732235. Epub 2012 Oct 10.

PMID:
22994795
35.

Production of fungal and bacterial growth modulating secondary metabolites is widespread among mycorrhiza-associated streptomycetes.

Schrey SD, Erkenbrack E, Früh E, Fengler S, Hommel K, Horlacher N, Schulz D, Ecke M, Kulik A, Fiedler HP, Hampp R, Tarkka MT.

BMC Microbiol. 2012 Aug 2;12:164. doi: 10.1186/1471-2180-12-164.

36.

Diazoxide may protect endothelial glycocalyx integrity during coronary artery bypass grafting.

Mennander AA, Shalaby A, Oksala N, Leppänen T, Hämäläinen M, Huovinen S, Zhao F, Moilanen E, Tarkka M.

Scand Cardiovasc J. 2012 Dec;46(6):339-44. doi: 10.3109/14017431.2012.717303. Epub 2012 Aug 31.

PMID:
22845420
37.

Effect of social support on changes in quality of life in early breast cancer patients: a longitudinal study.

Salonen P, Tarkka MT, Kellokumpu-Lehtinen PL, Koivisto AM, Aalto P, Kaunonen M.

Scand J Caring Sci. 2013 Jun;27(2):396-405. doi: 10.1111/j.1471-6712.2012.01050.x. Epub 2012 Jul 27.

PMID:
22834764
38.

Protein-SIP enables time-resolved analysis of the carbon flux in a sulfate-reducing, benzene-degrading microbial consortium.

Taubert M, Vogt C, Wubet T, Kleinsteuber S, Tarkka MT, Harms H, Buscot F, Richnow HH, von Bergen M, Seifert J.

ISME J. 2012 Dec;6(12):2291-301. doi: 10.1038/ismej.2012.68. Epub 2012 Jul 12.

39.

Soluble urokinase-type plasminogen activator receptor in patients with suspected infection in the emergency room: a prospective cohort study.

Uusitalo-Seppälä R, Huttunen R, Tarkka M, Aittoniemi J, Koskinen P, Leino A, Vahlberg T, Rintala EM.

J Intern Med. 2012 Sep;272(3):247-56. doi: 10.1111/j.1365-2796.2012.02569.x. Epub 2012 Jul 29.

40.

Postoperative sternal stability assessed by vibration: a preliminary study.

Hautalahti J, Beev N, Hyttinen J, Tarkka M, Laurikka J.

Ann Thorac Surg. 2012 Jul;94(1):260-4. doi: 10.1016/j.athoracsur.2012.01.053.

PMID:
22734988
41.

A systematic review of peer support interventions for breastfeeding.

Kaunonen M, Hannula L, Tarkka MT.

J Clin Nurs. 2012 Jul;21(13-14):1943-54. doi: 10.1111/j.1365-2702.2012.04071.x. Review.

PMID:
22672457
42.

European multicenter study with the Soprano valve for aortic valve replacement: one-year clinical experience and hemodynamic data.

Fischlein T, Otero-Coto E, Werkkala K, Passerone G, Marinelli G, Tarkka MR, Feindt P, Perez de Isla L, Zamorano JL.

J Heart Valve Dis. 2011 Nov;20(6):695-703.

PMID:
22655501
43.

High-throughput quantification of circulating metabolites improves prediction of subclinical atherosclerosis.

Würtz P, Raiko JR, Magnussen CG, Soininen P, Kangas AJ, Tynkkynen T, Thomson R, Laatikainen R, Savolainen MJ, Laurikka J, Kuukasjärvi P, Tarkka M, Karhunen PJ, Jula A, Viikari JS, Kähönen M, Lehtimäki T, Juonala M, Ala-Korpela M, Raitakari OT.

Eur Heart J. 2012 Sep;33(18):2307-16. doi: 10.1093/eurheartj/ehs020. Epub 2012 Mar 26.

PMID:
22450427
44.

Lack of C4d deposition may reveal susceptibility for ascending aortic dissection.

Niinimaki E, Paavonen T, Valo T, Tarkka M, Mennander A.

Scand Cardiovasc J. 2012 Jun;46(3):177-82. doi: 10.3109/14017431.2012.663502. Epub 2012 Mar 15.

PMID:
22300108
45.

Bacterial-fungal interactions: hyphens between agricultural, clinical, environmental, and food microbiologists.

Frey-Klett P, Burlinson P, Deveau A, Barret M, Tarkka M, Sarniguet A.

Microbiol Mol Biol Rev. 2011 Dec;75(4):583-609. doi: 10.1128/MMBR.00020-11. Review.

46.

Evaluating a bereavement follow-up intervention for grieving fathers and their experiences of support after the death of a child--a pilot study.

Aho AL, Tarkka MT, Astedt-Kurki P, Sorvari L, Kaunonen M.

Death Stud. 2011 Nov-Dec;35(10):879-904.

PMID:
24501857
47.

Women's perceptions of caesarean birth: a Roy international study.

Fawcett J, Aber C, Haussler S, Weiss M, Myers ST, Hall JL, Waters VL, King C, Tarkka MT, Rantanen A, Astedt-Kurki P, Newton J, Silva V.

Nurs Sci Q. 2011 Oct;24(4):352-62. doi: 10.1177/0894318411419211.

PMID:
21975484
48.

Perceived family health in persons with prostate cancer and their family members.

Harju E, Rantanen A, Tarkka MT, Astedt-Kurki P.

J Clin Nurs. 2012 Feb;21(3-4):544-54. doi: 10.1111/j.1365-2702.2011.03775.x. Epub 2011 Aug 15.

PMID:
21843211
49.

Basidiomycetous yeasts from boletales fruiting bodies and their interactions with the mycoparasite Sepedonium chrysospermum and the host fungus Paxillus.

Yurkov A, Krüger D, Begerow D, Arnold N, Tarkka MT.

Microb Ecol. 2012 Feb;63(2):295-303. doi: 10.1007/s00248-011-9923-7. Epub 2011 Aug 11.

PMID:
21833540
50.

miR-21, miR-210, miR-34a, and miR-146a/b are up-regulated in human atherosclerotic plaques in the Tampere Vascular Study.

Raitoharju E, Lyytikäinen LP, Levula M, Oksala N, Mennander A, Tarkka M, Klopp N, Illig T, Kähönen M, Karhunen PJ, Laaksonen R, Lehtimäki T.

Atherosclerosis. 2011 Nov;219(1):211-7. doi: 10.1016/j.atherosclerosis.2011.07.020. Epub 2011 Jul 22.

PMID:
21820659

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