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Items: 11

1.

Molecular strategy for blocking isopeptide bond formation in nascent pilin proteins.

Rivas-Pardo JA, Badilla CL, Tapia-Rojo R, Alonso-Caballero Á, Fernández JM.

Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):9222-9227. doi: 10.1073/pnas.1807689115. Epub 2018 Aug 27.

PMID:
30150415
2.

The Work of Titin Protein Folding as a Major Driver in Muscle Contraction.

Eckels EC, Tapia-Rojo R, Rivas-Pardo JA, Fernández JM.

Annu Rev Physiol. 2018 Feb 10;80:327-351. doi: 10.1146/annurev-physiol-021317-121254.

3.

Trigger factor chaperone acts as a mechanical foldase.

Haldar S, Tapia-Rojo R, Eckels EC, Valle-Orero J, Fernandez JM.

Nat Commun. 2017 Sep 22;8(1):668. doi: 10.1038/s41467-017-00771-6.

4.

Proteins Breaking Bad: A Free Energy Perspective.

Valle-Orero J, Tapia-Rojo R, Eckels EC, Rivas-Pardo JA, Popa I, Fernández JM.

J Phys Chem Lett. 2017 Aug 3;8(15):3642-3647. doi: 10.1021/acs.jpclett.7b01509. Epub 2017 Jul 25.

5.

Structure, dynamics and kinetics of two-component Lantibiotic Lichenicidin.

de Miguel A, Tapia-Rojo R, Utesch T, Mroginski MA.

PLoS One. 2017 Jun 27;12(6):e0179962. doi: 10.1371/journal.pone.0179962. eCollection 2017.

6.

Mechanical Deformation Accelerates Protein Ageing.

Valle-Orero J, Rivas-Pardo JA, Tapia-Rojo R, Popa I, Echelman DJ, Haldar S, Fernández JM.

Angew Chem Int Ed Engl. 2017 Aug 7;56(33):9741-9746. doi: 10.1002/anie.201703630. Epub 2017 May 19.

7.

A physical picture for mechanical dissociation of biological complexes: from forces to free energies.

Tapia-Rojo R, Marcuello C, Lostao A, Gómez-Moreno C, J Mazo J, Falo F.

Phys Chem Chem Phys. 2017 Feb 8;19(6):4567-4575. doi: 10.1039/c6cp07508h.

PMID:
28124058
8.

Mechanical unfolding of a simple model protein goes beyond the reach of one-dimensional descriptions.

Tapia-Rojo R, Arregui S, Mazo JJ, Falo F.

J Chem Phys. 2014 Oct 7;141(13):135102. doi: 10.1063/1.4896620.

PMID:
25296840
9.

Mesoscopic model and free energy landscape for protein-DNA binding sites: analysis of cyanobacterial promoters.

Tapia-Rojo R, Mazo JJ, Hernández JÁ, Peleato ML, Fillat MF, Falo F.

PLoS Comput Biol. 2014 Oct 2;10(10):e1003835. doi: 10.1371/journal.pcbi.1003835. eCollection 2014 Oct.

10.

Mesoscopic model for free-energy-landscape analysis of DNA sequences.

Tapia-Rojo R, Prada-Gracia D, Mazo JJ, Falo F.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Aug;86(2 Pt 1):021908. Epub 2012 Aug 9.

PMID:
23005786
11.

Thermal and mechanical properties of a DNA model with solvation barrier.

Tapia-Rojo R, Mazo JJ, Falo F.

Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Sep;82(3 Pt 1):031916. Epub 2010 Sep 27.

PMID:
21230117

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