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Items: 1 to 50 of 118


A phosphorylation-based switch controls TAA1-mediated auxin biosynthesis in plants.

Wang Q, Qin G, Cao M, Chen R, He Y, Yang L, Zeng Z, Yu Y, Gu Y, Xing W, Tao WA, Xu T.

Nat Commun. 2020 Feb 3;11(1):679. doi: 10.1038/s41467-020-14395-w.


A RAF-SnRK2 kinase cascade mediates early osmotic stress signaling in higher plants.

Lin Z, Li Y, Zhang Z, Liu X, Hsu CC, Du Y, Sang T, Zhu C, Wang Y, Satheesh V, Pratibha P, Zhao Y, Song CP, Tao WA, Zhu JK, Wang P.

Nat Commun. 2020 Jan 30;11(1):613. doi: 10.1038/s41467-020-14477-9.


Mapping proteome-wide targets of protein kinases in plant stress responses.

Wang P, Hsu CC, Du Y, Zhu P, Zhao C, Fu X, Zhang C, Paez JS, Macho AP, Tao WA, Zhu JK.

Proc Natl Acad Sci U S A. 2020 Feb 11;117(6):3270-3280. doi: 10.1073/pnas.1919901117. Epub 2020 Jan 28.


An evolutionarily conserved iron-sulfur cluster underlies redox sensory function of the Chloroplast Sensor Kinase.

Ibrahim IM, Wu H, Ezhov R, Kayanja GE, Zakharov SD, Du Y, Tao WA, Pushkar Y, Cramer WA, Puthiyaveetil S.

Commun Biol. 2020 Jan 8;3(1):13. doi: 10.1038/s42003-019-0728-4.


Sequential phosphoproteomics and N-glycoproteomics of plasma-derived extracellular vesicles.

Andaluz Aguilar H, Iliuk AB, Chen IH, Tao WA.

Nat Protoc. 2020 Jan;15(1):161-180. doi: 10.1038/s41596-019-0260-5. Epub 2019 Dec 20.


Tracking Pathogen Infections by Time-Resolved Chemical Proteomics.

Zhang Y, Kao DS, Gu B, Bomjan R, Srivastava M, Lu H, Zhou D, Tao WA.

Angew Chem Int Ed Engl. 2020 Feb 3;59(6):2235-2240. doi: 10.1002/anie.201911078. Epub 2020 Jan 9.


Methyltransferase-like 21c methylates and stabilizes the heat shock protein Hspa8 in type I myofibers in mice.

Wang C, Arrington J, Ratliff AC, Chen J, Horton HE, Nie Y, Yue F, Hrycyna CA, Tao WA, Kuang S.

J Biol Chem. 2019 Sep 13;294(37):13718-13728. doi: 10.1074/jbc.RA119.008430. Epub 2019 Jul 25.


Methyltransferase-like 21e inhibits 26S proteasome activity to facilitate hypertrophy of type IIb myofibers.

Wang C, Zhang B, Ratliff AC, Arrington J, Chen J, Xiong Y, Yue F, Nie Y, Hu K, Jin W, Tao WA, Hrycyna CA, Sun X, Kuang S.

FASEB J. 2019 Aug;33(8):9672-9684. doi: 10.1096/fj.201900582R. Epub 2019 Jun 4.


Arabinose biosynthesis is critical for salt stress tolerance in Arabidopsis.

Zhao C, Zayed O, Zeng F, Liu C, Zhang L, Zhu P, Hsu CC, Tuncil YE, Tao WA, Carpita NC, Zhu JK.

New Phytol. 2019 Oct;224(1):274-290. doi: 10.1111/nph.15867. Epub 2019 May 17.


Identification of the Direct Substrates of the ABL Kinase via Kinase Assay Linked Phosphoproteomics with Multiple Drug Treatments.

Arrington J, Xue L, Wang WH, Geahlen RL, Tao WA.

J Proteome Res. 2019 Apr 5;18(4):1679-1690. doi: 10.1021/acs.jproteome.8b00942. Epub 2019 Mar 21.


Leucine-rich repeat extensin proteins regulate plant salt tolerance in Arabidopsis.

Zhao C, Zayed O, Yu Z, Jiang W, Zhu P, Hsu CC, Zhang L, Tao WA, Lozano-Durán R, Zhu JK.

Proc Natl Acad Sci U S A. 2018 Dec 18;115(51):13123-13128. doi: 10.1073/pnas.1816991115. Epub 2018 Dec 4.


Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin.

Zhang C, Du X, Tang K, Yang Z, Pan L, Zhu P, Luo J, Jiang Y, Zhang H, Wan H, Wang X, Wu F, Tao WA, He XJ, Zhang H, Bressan RA, Du J, Zhu JK.

Nat Commun. 2018 Oct 31;9(1):4547. doi: 10.1038/s41467-018-06965-w.


High-Throughput Phosphorylation Screening and Validation through Ti(IV)-Nanopolymer Functionalized Reverse Phase Phosphoprotein Array.

Zhang Y, Zhao C, Li L, Hsu CC, Zhu JK, Iliuk A, Tao WA.

Anal Chem. 2018 Sep 4;90(17):10263-10270. doi: 10.1021/acs.analchem.8b01843. Epub 2018 Aug 23.


Highly Efficient Phosphoproteome Capture and Analysis from Urinary Extracellular Vesicles.

Wu X, Li L, Iliuk A, Tao WA.

J Proteome Res. 2018 Sep 7;17(9):3308-3316. doi: 10.1021/acs.jproteome.8b00459. Epub 2018 Aug 17.


Universal Plant Phosphoproteomics Workflow and Its Application to Tomato Signaling in Response to Cold Stress.

Hsu CC, Zhu Y, Arrington JV, Paez JS, Wang P, Zhu P, Chen IH, Zhu JK, Tao WA.

Mol Cell Proteomics. 2018 Oct;17(10):2068-2080. doi: 10.1074/mcp.TIR118.000702. Epub 2018 Jul 13.


Arabidopsis Duodecuple Mutant of PYL ABA Receptors Reveals PYL Repression of ABA-Independent SnRK2 Activity.

Zhao Y, Zhang Z, Gao J, Wang P, Hu T, Wang Z, Hou YJ, Wan Y, Liu W, Xie S, Lu T, Xue L, Liu Y, Macho AP, Tao WA, Bressan RA, Zhu JK.

Cell Rep. 2018 Jun 12;23(11):3340-3351.e5. doi: 10.1016/j.celrep.2018.05.044.


NIR stimulus-responsive core-shell type nanoparticles based on photothermal conversion for enhanced antitumor efficacy through chemo-photothermal therapy.

Sun K, You C, Wang S, Gao Z, Wu H, Tao WA, Zhu X, Sun B.

Nanotechnology. 2018 Jul 13;29(28):285302. doi: 10.1088/1361-6528/aabf59. Epub 2018 Apr 19.


Analytical Pipeline for Discovery and Verification of Glycoproteins from Plasma-Derived Extracellular Vesicles as Breast Cancer Biomarkers.

Chen IH, Aguilar HA, Paez Paez JS, Wu X, Pan L, Wendt MK, Iliuk AB, Zhang Y, Tao WA.

Anal Chem. 2018 May 15;90(10):6307-6313. doi: 10.1021/acs.analchem.8b01090. Epub 2018 Apr 23.


Reciprocal Regulation of the TOR Kinase and ABA Receptor Balances Plant Growth and Stress Response.

Wang P, Zhao Y, Li Z, Hsu CC, Liu X, Fu L, Hou YJ, Du Y, Xie S, Zhang C, Gao J, Cao M, Huang X, Zhu Y, Tang K, Wang X, Tao WA, Xiong Y, Zhu JK.

Mol Cell. 2018 Jan 4;69(1):100-112.e6. doi: 10.1016/j.molcel.2017.12.002. Epub 2017 Dec 28.


Acquisition of Cholangiocarcinoma Traits during Advanced Hepatocellular Carcinoma Development in Mice.

Li L, Qian M, Chen IH, Finkelstein D, Onar-Thomas A, Johnson M, Calabrese C, Bahrami A, López-Terrada DH, Yang JJ, Tao WA, Zhu L.

Am J Pathol. 2018 Mar;188(3):656-671. doi: 10.1016/j.ajpath.2017.11.013. Epub 2017 Dec 15.


Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases.

Yang Z, Qiu Q, Chen W, Jia B, Chen X, Hu H, He K, Deng X, Li S, Tao WA, Cao X, Du J.

Plant Cell. 2018 Jan;30(1):167-177. doi: 10.1105/tpc.17.00666. Epub 2017 Dec 12.


An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress.

Zhu Y, Wang B, Tang K, Hsu CC, Xie S, Du H, Yang Y, Tao WA, Zhu JK.

PLoS Genet. 2017 Dec 12;13(12):e1007124. doi: 10.1371/journal.pgen.1007124. eCollection 2017 Dec.


Identification of Upstream Kinases by Fluorescence Complementation Mass Spectrometry.

Zeng L, Wang WH, Arrington J, Shao G, Geahlen RL, Hu CD, Tao WA.

ACS Cent Sci. 2017 Oct 25;3(10):1078-1085. doi: 10.1021/acscentsci.7b00261. Epub 2017 Sep 13.


MAP Kinase Cascades Regulate the Cold Response by Modulating ICE1 Protein Stability.

Zhao C, Wang P, Si T, Hsu CC, Wang L, Zayed O, Yu Z, Zhu Y, Dong J, Tao WA, Zhu JK.

Dev Cell. 2017 Dec 4;43(5):618-629.e5. doi: 10.1016/j.devcel.2017.09.024. Epub 2017 Oct 19.


EZH2 Modifies Sunitinib Resistance in Renal Cell Carcinoma by Kinome Reprogramming.

Adelaiye-Ogala R, Budka J, Damayanti NP, Arrington J, Ferris M, Hsu CC, Chintala S, Orillion A, Miles KM, Shen L, Elbanna M, Ciamporcero E, Arisa S, Pettazzoni P, Draetta GF, Seshadri M, Hancock B, Radovich M, Kota J, Buck M, Keilhack H, McCarthy BP, Persohn SA, Territo PR, Zang Y, Irudayaraj J, Tao WA, Hollenhorst P, Pili R.

Cancer Res. 2017 Dec 1;77(23):6651-6666. doi: 10.1158/0008-5472.CAN-17-0899. Epub 2017 Oct 4.


A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis.

Duan CG, Wang X, Zhang L, Xiong X, Zhang Z, Tang K, Pan L, Hsu CC, Xu H, Tao WA, Zhang H, Zhu JK.

Proc Natl Acad Sci U S A. 2017 Aug 29;114(35):E7377-E7384. doi: 10.1073/pnas.1710683114. Epub 2017 Aug 14.


Identification of Plant Kinase Substrates Based on Kinase Assay-Linked Phosphoproteomics.

Hsu CC, Arrington JV, Xue L, Tao WA.

Methods Mol Biol. 2017;1636:327-335. doi: 10.1007/978-1-4939-7154-1_21.


The SnRK2 kinases modulate miRNA accumulation in Arabidopsis.

Yan J, Wang P, Wang B, Hsu CC, Tang K, Zhang H, Hou YJ, Zhao Y, Wang Q, Zhao C, Zhu X, Tao WA, Li J, Zhu JK.

PLoS Genet. 2017 Apr 18;13(4):e1006753. doi: 10.1371/journal.pgen.1006753. eCollection 2017 Apr.


Estimating the Efficiency of Phosphopeptide Identification by Tandem Mass Spectrometry.

Hsu CC, Xue L, Arrington JV, Wang P, Paez Paez JS, Zhou Y, Zhu JK, Tao WA.

J Am Soc Mass Spectrom. 2017 Jun;28(6):1127-1135. doi: 10.1007/s13361-017-1603-5. Epub 2017 Mar 10.


Phosphoproteins in extracellular vesicles as candidate markers for breast cancer.

Chen IH, Xue L, Hsu CC, Paez JS, Pan L, Andaluz H, Wendt MK, Iliuk AB, Zhu JK, Tao WA.

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3175-3180. doi: 10.1073/pnas.1618088114. Epub 2017 Mar 7.


MST50 is involved in multiple MAP kinase signaling pathways in Magnaporthe oryzae.

Li G, Zhang X, Tian H, Choi YE, Tao WA, Xu JR.

Environ Microbiol. 2017 May;19(5):1959-1974. doi: 10.1111/1462-2920.13710. Epub 2017 Apr 10.


Discovery of Nicotinamide Adenine Dinucleotide Binding Proteins in the Escherichia coli Proteome Using a Combined Energetic- and Structural-Bioinformatics-Based Approach.

Zeng L, Shin WH, Zhu X, Park SH, Park C, Tao WA, Kihara D.

J Proteome Res. 2017 Feb 3;16(2):470-480. doi: 10.1021/acs.jproteome.6b00624. Epub 2016 Dec 5.


Kinase Assay-Linked Phosphoproteomics: Discovery of Direct Kinase Substrates.

Arrington JV, Hsu CC, Tao WA.

Methods Enzymol. 2017;586:453-471. doi: 10.1016/bs.mie.2016.11.005. Epub 2016 Dec 7.


Ascl2 inhibits myogenesis by antagonizing the transcriptional activity of myogenic regulatory factors.

Wang C, Wang M, Arrington J, Shan T, Yue F, Nie Y, Tao WA, Kuang S.

Development. 2017 Jan 15;144(2):235-247. doi: 10.1242/dev.138099. Epub 2016 Dec 19.


A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation.

Duan CG, Wang X, Xie S, Pan L, Miki D, Tang K, Hsu CC, Lei M, Zhong Y, Hou YJ, Wang Z, Zhang Z, Mangrauthia SK, Xu H, Zhang H, Dilkes B, Tao WA, Zhu JK.

Cell Res. 2017 Feb;27(2):226-240. doi: 10.1038/cr.2016.147. Epub 2016 Dec 9.


Three-Dimensionally Functionalized Reverse Phase Glycoprotein Array for Cancer Biomarker Discovery and Validation.

Pan L, Aguilar HA, Wang L, Iliuk A, Tao WA.

J Am Chem Soc. 2016 Nov 30;138(47):15311-15314. Epub 2016 Nov 17.


BNIP3 Protein Suppresses PINK1 Kinase Proteolytic Cleavage to Promote Mitophagy.

Zhang T, Xue L, Li L, Tang C, Wan Z, Wang R, Tan J, Tan Y, Han H, Tian R, Billiar TR, Tao WA, Zhang Z.

J Biol Chem. 2016 Oct 7;291(41):21616-21629. Epub 2016 Aug 15.


Multiplexed Imaging of Protein Phosphorylation on Membranes Based on Ti(IV) Functionalized Nanopolymers.

Iliuk A, Li L, Melesse M, Hall MC, Tao WA.

Chembiochem. 2016 May 17;17(10):900-3. doi: 10.1002/cbic.201600068. Epub 2016 Apr 1.


The E3 ubiquitin ligase CHIP mediates ubiquitination and proteasomal degradation of PRMT5.

Zhang HT, Zeng LF, He QY, Tao WA, Zha ZG, Hu CD.

Biochim Biophys Acta. 2016 Feb;1863(2):335-46. doi: 10.1016/j.bbamcr.2015.12.001. Epub 2015 Dec 2.


Identification of Direct Kinase Substrates via Kinase Assay-Linked Phosphoproteomics.

Xue L, Arrington JV, Tao WA.

Methods Mol Biol. 2016;1355:263-73. doi: 10.1007/978-1-4939-3049-4_18.


MET18 Connects the Cytosolic Iron-Sulfur Cluster Assembly Pathway to Active DNA Demethylation in Arabidopsis.

Duan CG, Wang X, Tang K, Zhang H, Mangrauthia SK, Lei M, Hsu CC, Hou YJ, Wang C, Li Y, Tao WA, Zhu JK.

PLoS Genet. 2015 Oct 22;11(10):e1005559. doi: 10.1371/journal.pgen.1005559. eCollection 2015 Oct.


Time-Resolved Proteomic Visualization of Dendrimer Cellular Entry and Trafficking.

Wang L, Yang L, Pan L, Kadasala NR, Xue L, Schuster RJ, Parker LL, Wei A, Tao WA.

J Am Chem Soc. 2015 Oct 14;137(40):12772-12775. doi: 10.1021/jacs.5b07875. Epub 2015 Oct 5.


In-Depth Analyses of B Cell Signaling Through Tandem Mass Spectrometry of Phosphopeptides Enriched by PolyMAC.

Iliuk A, Jayasundera K, Wang WH, Schluttenhofer R, Geahlen RL, Tao WA.

Int J Mass Spectrom. 2015 Feb 1;377:744-753.


Sensitive measurement of total protein phosphorylation level in complex protein samples.

Pan L, Wang L, Hsu CC, Zhang J, Iliuk A, Tao WA.

Analyst. 2015 May 21;140(10):3390-6. doi: 10.1039/c5an00365b. Epub 2015 Apr 10.


Universal non-antibody detection of protein phosphorylation using pIMAGO.

Iliuk AB, Tao WA.

Curr Protoc Chem Biol. 2015 Mar 2;7(1):17-25. doi: 10.1002/9780470559277.ch140208.


The methyl-CpG-binding protein MBD7 facilitates active DNA demethylation to limit DNA hyper-methylation and transcriptional gene silencing.

Lang Z, Lei M, Wang X, Tang K, Miki D, Zhang H, Mangrauthia SK, Liu W, Nie W, Ma G, Yan J, Duan CG, Hsu CC, Wang C, Tao WA, Gong Z, Zhu JK.

Mol Cell. 2015 Mar 19;57(6):971-983. doi: 10.1016/j.molcel.2015.01.009. Epub 2015 Feb 12.


The sensor histidine kinase RgfC affects group B streptococcal virulence factor expression independent of its response regulator RgfA.

Gendrin C, Lembo A, Whidbey C, Burnside K, Berry J, Ngo L, Banerjee A, Xue L, Arrington J, Doran KS, Tao WA, Rajagopal L.

Infect Immun. 2015 Mar;83(3):1078-88. doi: 10.1128/IAI.02738-14. Epub 2015 Jan 5.


Nitric oxide negatively regulates abscisic acid signaling in guard cells by S-nitrosylation of OST1.

Wang P, Du Y, Hou YJ, Zhao Y, Hsu CC, Yuan F, Zhu X, Tao WA, Song CP, Zhu JK.

Proc Natl Acad Sci U S A. 2015 Jan 13;112(2):613-8. doi: 10.1073/pnas.1423481112. Epub 2014 Dec 30.


Identification of extracellular signal-regulated kinase 1 (ERK1) direct substrates using stable isotope labeled kinase assay-linked phosphoproteomics.

Xue L, Wang P, Cao P, Zhu JK, Tao WA.

Mol Cell Proteomics. 2014 Nov;13(11):3199-210. doi: 10.1074/mcp.O114.038588. Epub 2014 Jul 14.


Specific visualization and identification of phosphoproteome in gels.

Wang L, Pan L, Tao WA.

Anal Chem. 2014 Jul 15;86(14):6741-7. doi: 10.1021/ac501641u. Epub 2014 Jun 30.

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