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Items: 24

1.

Human and computational models of atopic dermatitis: A review and perspectives by an expert panel of the International Eczema Council.

Eyerich K, Brown SJ, Perez White BE, Tanaka RJ, Bissonette R, Dhar S, Bieber T, Hijnen DJ, Guttman-Yassky E, Irvine A, Thyssen JP, Vestergaard C, Werfel T, Wollenberg A, Paller AS, Reynolds NJ.

J Allergy Clin Immunol. 2019 Jan;143(1):36-45. doi: 10.1016/j.jaci.2018.10.033. Epub 2018 Nov 7. Review.

2.

Systemic and stratum corneum biomarkers of severity in infant atopic dermatitis include markers of innate and T helper cell-related immunity and angiogenesis.

McAleer MA, Jakasa I, Hurault G, Sarvari P, McLean WHI, Tanaka RJ, Kezic S, Irvine AD.

Br J Dermatol. 2019 Mar;180(3):586-596. doi: 10.1111/bjd.17088. Epub 2018 Oct 4.

3.

Relationship and probabilistic stratification of Eczema Area and Severity Index and objective Scoring Atopic Dermatitis severity scores for atopic dermatitis.

Hurault G, Schram ME, Roekevisch E, Spuls PI, Tanaka RJ.

Br J Dermatol. 2018 Oct;179(4):1003-1005. doi: 10.1111/bjd.16916. Epub 2018 Sep 4. No abstract available.

4.

Bifurcation analysis of a mathematical model of atopic dermatitis to determine patient-specific effects of treatments on dynamic phenotypes.

Tanaka G, Domínguez-Hüttinger E, Christodoulides P, Aihara K, Tanaka RJ.

J Theor Biol. 2018 Jul 7;448:66-79. doi: 10.1016/j.jtbi.2018.04.002. Epub 2018 Apr 3.

5.

Distributing tasks via multiple input pathways increases cellular survival in stress.

Granados AA, Crane MM, Montano-Gutierrez LF, Tanaka RJ, Voliotis M, Swain PS.

Elife. 2017 May 17;6. pii: e21415. doi: 10.7554/eLife.21415.

6.

Computational design of treatment strategies for proactive therapy on atopic dermatitis using optimal control theory.

Christodoulides P, Hirata Y, Domínguez-Hüttinger E, Danby SG, Cork MJ, Williams HC, Aihara K, Tanaka RJ.

Philos Trans A Math Phys Eng Sci. 2017 Jun 28;375(2096). pii: 20160285. doi: 10.1098/rsta.2016.0285.

7.

Mathematical Modeling of Streptococcus pneumoniae Colonization, Invasive Infection and Treatment.

Domínguez-Hüttinger E, Boon NJ, Clarke TB, Tanaka RJ.

Front Physiol. 2017 Mar 2;8:115. doi: 10.3389/fphys.2017.00115. eCollection 2017.

8.

Mathematical modeling of atopic dermatitis reveals "double-switch" mechanisms underlying 4 common disease phenotypes.

Domínguez-Hüttinger E, Christodoulides P, Miyauchi K, Irvine AD, Okada-Hatakeyama M, Kubo M, Tanaka RJ.

J Allergy Clin Immunol. 2017 Jun;139(6):1861-1872.e7. doi: 10.1016/j.jaci.2016.10.026. Epub 2016 Dec 5.

9.

Epidermal cell turnover across tight junctions based on Kelvin's tetrakaidecahedron cell shape.

Yokouchi M, Atsugi T, Logtestijn MV, Tanaka RJ, Kajimura M, Suematsu M, Furuse M, Amagai M, Kubo A.

Elife. 2016 Nov 29;5. pii: e19593. doi: 10.7554/eLife.19593.

10.

Synergistic Activation of RD29A Via Integration of Salinity Stress and Abscisic Acid in Arabidopsis thaliana.

Lee SY, Boon NJ, Webb AA, Tanaka RJ.

Plant Cell Physiol. 2016 Oct;57(10):2147-2160. Epub 2016 Aug 6.

11.

Water resistance profile as a marker of skin barrier damage in atopic dermatitis patients.

van Logtestijn MD, Caspers PJ, Kezic S, Hoffman DR, Koenig DW, Ono M, Stamatas GN, Tanaka RJ.

J Dermatol Sci. 2016 Feb;81(2):126-8. doi: 10.1016/j.jdermsci.2015.10.017. Epub 2015 Nov 14. No abstract available.

12.

In silico modeling of spore inhalation reveals fungal persistence following low dose exposure.

Tanaka RJ, Boon NJ, Vrcelj K, Nguyen A, Vinci C, Armstrong-James D, Bignell E.

Sci Rep. 2015 Sep 14;5:13958. doi: 10.1038/srep13958.

13.

Controversies concerning thymus-derived regulatory T cells: fundamental issues and a new perspective.

Ono M, Tanaka RJ.

Immunol Cell Biol. 2016 Jan;94(1):3-10. doi: 10.1038/icb.2015.65. Epub 2015 Jul 28.

14.

Resistance to water diffusion in the stratum corneum is depth-dependent.

van Logtestijn MD, Domínguez-Hüttinger E, Stamatas GN, Tanaka RJ.

PLoS One. 2015 Feb 11;10(2):e0117292. doi: 10.1371/journal.pone.0117292. eCollection 2015.

15.

Visualisation of the T cell differentiation programme by Canonical Correspondence Analysis of transcriptomes.

Ono M, Tanaka RJ, Kano M.

BMC Genomics. 2014 Nov 27;15:1028. doi: 10.1186/1471-2164-15-1028.

16.

Risk factor-dependent dynamics of atopic dermatitis: modelling multi-scale regulation of epithelium homeostasis.

Domínguez-Hüttinger E, Ono M, Barahona M, Tanaka RJ.

Interface Focus. 2013 Apr 6;3(2):20120090. doi: 10.1098/rsfs.2012.0090.

17.

Closed-loop response properties of a visual interneuron involved in fly optomotor control.

Ejaz N, Krapp HG, Tanaka RJ.

Front Neural Circuits. 2013 Mar 27;7:50. doi: 10.3389/fncir.2013.00050. eCollection 2013.

18.

Skin disease modeling from a mathematical perspective.

Tanaka RJ, Ono M.

J Invest Dermatol. 2013 Jun;133(6):1472-8. doi: 10.1038/jid.2013.69. Epub 2013 Mar 21.

19.

Visualising the cross-level relationships between pathological and physiological processes and gene expression: analyses of haematological diseases.

Ono M, Tanaka RJ, Kano M, Sugiman T.

PLoS One. 2013;8(1):e53544. doi: 10.1371/journal.pone.0053544. Epub 2013 Jan 2.

20.

Modelling the influence of foot-and-mouth disease vaccine antigen stability and dose on the bovine immune response.

Schley D, Tanaka RJ, Leungchavaphongse K, Shahrezaei V, Ward J, Grant C, Charleston B, Rhodes CJ.

PLoS One. 2012;7(2):e30435. doi: 10.1371/journal.pone.0030435. Epub 2012 Feb 17.

21.

Skin barrier homeostasis in atopic dermatitis: feedback regulation of kallikrein activity.

Tanaka RJ, Ono M, Harrington HA.

PLoS One. 2011;6(5):e19895. doi: 10.1371/journal.pone.0019895. Epub 2011 May 25.

22.

Mathematical classification of regulatory logics for compound environmental changes.

Tanaka RJ, Kimura H.

J Theor Biol. 2008 Mar 21;251(2):363-79. doi: 10.1016/j.jtbi.2007.11.023. Epub 2007 Nov 24.

PMID:
18178225
23.

Stochastic approach to molecular interactions and computational theory of metabolic and genetic regulations.

Kimura H, Okano H, Tanaka RJ.

J Theor Biol. 2007 Oct 21;248(4):590-607. Epub 2007 Jul 4.

PMID:
17688887
24.

Mathematical description of gene regulatory units.

Tanaka RJ, Okano H, Kimura H.

Biophys J. 2006 Aug 15;91(4):1235-47. Epub 2006 May 19.

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